CmaCh17G012280 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G012280
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPlant self-incompatibility protein S1 family
LocationCma_Chr17 : 8455933 .. 8456340 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGCTTTTGTTGGGGCTCAGGTTCCGGGAATTATATATCAACCGAAACCTTCAAGGTATTACGTTCATGTTGCTAATGGTCTAAGCACGCTTCCGTTGACAGTGCATTGTCAGTCCAAAGACGATGATTTGGGGATTCACCATTTGCCTAATCGTGGAGATGATTTCCAATGGAACTTTAAGGTAAATTTTTGGGGAACAACCCTCTTTTGGTGCAGATTAGAGAGGCCGGATGCATATGTCACTTTTGAAACTTTTTGGCCTGAGTCGAAGAACACATGGCTTCGTGATAGGTGCAGAAATGGAACTCAAGGAACTTGCTTATGGATAGCTAAAGATGATGGAATTTACTTGTTTAACTTTCCTGCTAATAATGACGAGTTGATTCACAAATGGATCTTTTAG

mRNA sequence

ATGGTGGCTTTTGTTGGGGCTCAGGTTCCGGGAATTATATATCAACCGAAACCTTCAAGGTATTACGTTCATGTTGCTAATGGTCTAAGCACGCTTCCGTTGACAGTGCATTGTCAGTCCAAAGACGATGATTTGGGGATTCACCATTTGCCTAATCGTGGAGATGATTTCCAATGGAACTTTAAGGTAAATTTTTGGGGAACAACCCTCTTTTGGTGCAGATTAGAGAGGCCGGATGCATATGTCACTTTTGAAACTTTTTGGCCTGAGTCGAAGAACACATGGCTTCGTGATAGGTGCAGAAATGGAACTCAAGGAACTTGCTTATGGATAGCTAAAGATGATGGAATTTACTTGTTTAACTTTCCTGCTAATAATGACGAGTTGATTCACAAATGGATCTTTTAG

Coding sequence (CDS)

ATGGTGGCTTTTGTTGGGGCTCAGGTTCCGGGAATTATATATCAACCGAAACCTTCAAGGTATTACGTTCATGTTGCTAATGGTCTAAGCACGCTTCCGTTGACAGTGCATTGTCAGTCCAAAGACGATGATTTGGGGATTCACCATTTGCCTAATCGTGGAGATGATTTCCAATGGAACTTTAAGGTAAATTTTTGGGGAACAACCCTCTTTTGGTGCAGATTAGAGAGGCCGGATGCATATGTCACTTTTGAAACTTTTTGGCCTGAGTCGAAGAACACATGGCTTCGTGATAGGTGCAGAAATGGAACTCAAGGAACTTGCTTATGGATAGCTAAAGATGATGGAATTTACTTGTTTAACTTTCCTGCTAATAATGACGAGTTGATTCACAAATGGATCTTTTAG

Protein sequence

MVAFVGAQVPGIIYQPKPSRYYVHVANGLSTLPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWCRLERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANNDELIHKWIF
Homology
[Close]
BLAST of CmaCh17G012280 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.6e-26
Identity = 62/137 (45.26%), Postives = 78/137 (56.93%), Query Frame = 1 

Query: 1   MVAFVGAQVPGIIYQPKPSRYYVHVANGLST-LPLTVHCQSKDDDLGIHHLPNRGDDFQW 60
           ++ F+      ++     S + +H+ NGLS    L VHC+SKD DLG   L + G +F+W
Sbjct: 10  LLVFLAVSTLALVCSKPLSPWEIHIKNGLSDGQALFVHCKSKDSDLGERTL-STGAEFKW 69

Query: 61  NFKVNFWGTTLFWCRLERPDA-YVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIY 120
           NFKVN W TTLFWC L +P    V FE FW E K  WLR +C       C WIA+D GIY
Sbjct: 70  NFKVNIWDTTLFWCYLRKPKGDQVRFEAFWVEKKTRWLRVKCDG---NICNWIAEDTGIY 129

Query: 121 LFNFPANNDELIHKWIF 136
           L +   N DE IH W F
Sbjct: 130 LKDNSTNEDERIHYWKF 142

[Close]
BLAST of CmaCh17G012280 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-25
Identity = 57/125 (45.60%), Postives = 75/125 (60.00%), Query Frame = 1 

Query: 10  PGIIYQPKPSRYYVHVANGLST-LPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGT 69
           PGI Y    ++++VHV N L     L  HC+SKDDDLG  +L   G +F W+FK NF+GT
Sbjct: 12  PGIRY----NKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAP-GTEFNWSFKENFFGT 71

Query: 70  TLFWCRLERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANNDE 129
           TL+WC +     +   + FW E  ++WL+ RC       C+WIAKDDGIY+   P N DE
Sbjct: 72  TLYWCYMSTDQKHAALDVFWVEGDHSWLQYRC---NWKDCIWIAKDDGIYIKIIPENRDE 128

Query: 130 LIHKW 134
             HKW
Sbjct: 132 FSHKW 128

[Close]
BLAST of CmaCh17G012280 vs. TrEMBL
Match: A0A0A0KA40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 9.8e-24
Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 1 

Query: 14  YQPKPSRYYVHVANGLSTLPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWC 73
           YQ   + + V + N      L VHC+SKDDDLG+H + N G+ + W FK N+  TT +WC
Sbjct: 31  YQLPLTDWTVTIINYQINASLQVHCKSKDDDLGVHVIQNEGEHYSWGFKENWLQTTKYWC 90

Query: 74  RLERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANNDELIHKW 133
             +    + +FE FWPE + TW  DRC  G+   C+W+A  DG  L N PA   E  H W
Sbjct: 91  DFQSKLGHASFEVFWPE-RGTWFSDRC--GSNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 148

Query: 134 I 135
           +
Sbjct: 151 L 148

[Close]
BLAST of CmaCh17G012280 vs. TrEMBL
Match: B9IIH9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s06720g PE=4 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 9.8e-24
Identity = 57/122 (46.72%), Postives = 77/122 (63.11%), Query Frame = 1 

Query: 16  PKPSRYYVHVANGLSTLP-LTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWCR 75
           P   RY++H+ NGLS    L VHCQSK++DLG+H++P   + F W+F+ N WGTTLFWC 
Sbjct: 44  PIAPRYHLHILNGLSPDKILLVHCQSKNNDLGVHNIPVNSE-FDWSFRTNAWGTTLFWCY 103

Query: 76  LERPD-AYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANN-DELIHK 135
           L   D ++  F  F  + K T   D C     G C WIAKDDG+YL +FP N+ D+L + 
Sbjct: 104 LAPDDHSHADFNAFQDKEKIT---DSCDG--NGNCCWIAKDDGVYLRDFPKNSTDDLKYH 159

[Close]
BLAST of CmaCh17G012280 vs. TrEMBL
Match: B9S575_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722060 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-23
Identity = 64/139 (46.04%), Postives = 81/139 (58.27%), Query Frame = 1 

Query: 1   MVAFVGAQVPGIIYQPKPSR---YYVHVANGLS-TLPLTVHCQSKDDDLGIHHLPNRGDD 60
           M+ F+     G+ +   PS    YYVH+ N LS    L VHC+SKDDDLGIH LP R   
Sbjct: 1   MIKFLFILALGLSFFVTPSSCDPYYVHITNELSHNKVLHVHCKSKDDDLGIHQLP-RSQH 60

Query: 61  FQWNFKVNFWGTTLFWCRLERPD--AYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKD 120
           + W F +NF+ TTLFWC +  PD  ++  F+ FW   K+ ++ DRC       C W+AKD
Sbjct: 61  YSWRFNLNFFATTLFWCYM-APDSNSHANFKVFW---KSGYMDDRCAG---HHCYWVAKD 120

Query: 121 DGIYLFNFPANNDELIHKW 134
           DG YL N P   DEL HKW
Sbjct: 121 DGAYLRN-PPRPDELQHKW 130

[Close]
BLAST of CmaCh17G012280 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 94.4 bits (233), Expect = 5.9e-20
Identity = 50/122 (40.98%), Postives = 68/122 (55.74%), Query Frame = 1 

Query: 13  IYQPKPSRYYVHVANGLST-LPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLF 72
           I  PK S + V VANGL+T   L +HC+SK++DLG  +L    D F WNF  N   +TLF
Sbjct: 33  IVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFL-DRFSWNFGENMLHSTLF 92

Query: 73  WCRLERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANNDELIH 132
           WC + + D ++  + FW +     L  RC       C+W AK+DG+YL+N     D L  
Sbjct: 93  WCYMSKDDGHMNVKVFWDD---VILFHRC---DWKNCVWTAKNDGLYLWNSAIGEDVLSE 147

Query: 133 KW 134
           KW
Sbjct: 153 KW 147

[Close]
BLAST of CmaCh17G012280 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-19
Identity = 50/130 (38.46%), Postives = 68/130 (52.31%), Query Frame = 1 

Query: 5   VGAQVPGIIYQPKPSRYYVHVANGLST-LPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKV 64
           VG      I  PK S + V V NGL+T   L +HC+SK+DDLG  +L  R + F WNF  
Sbjct: 25  VGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGE 84

Query: 65  NFWGTTLFWCRLERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFP 124
           N   +T FWC + + + ++    FW +     L  RC       C+W AK DG+YL+N  
Sbjct: 85  NMLHSTFFWCYMNKDNGHMNVNVFWDD---VILFHRC---GWKNCIWTAKTDGLYLWNSA 144

Query: 125 ANNDELIHKW 134
           +  D L  KW
Sbjct: 145 SGEDVLSRKW 147

[Close]
BLAST of CmaCh17G012280 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 1 

Query: 34  LTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWCRLER-PD-----AYVTFETF 93
           L VHC+SKDDDLG  H+   G D+++ F  N W TT F C++++ P+      +V +ET 
Sbjct: 41  LKVHCRSKDDDLG-EHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETS 100

Query: 94  WPESKNTWLRDRCRNGTQGTCLWIAKDDGIY 119
           W ++             + +C WI ++DGIY
Sbjct: 101 WSKA------------LEASCKWIGREDGIY 118

[Close]
BLAST of CmaCh17G012280 vs. TAIR10
Match: AT5G04347.1 (AT5G04347.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11
Identity = 41/112 (36.61%), Postives = 55/112 (49.11%), Query Frame = 1 

Query: 25  VANGLSTLPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWCRL-ERPD--AY 84
           V N L+   L V C+SKDD+LG H L   G   + NF  N W  TLFWC L + PD   +
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLGDHIL-RVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLH 85

Query: 85  VTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANNDELIHKW 134
           V F+ +    ++ W  D          LWIA++DGIY    P    +  + W
Sbjct: 86  VAFDAY----RSQWKAD-----IGPRYLWIAREDGIYYTQHPETPPKKKYDW 127

[Close]
BLAST of CmaCh17G012280 vs. TAIR10
Match: AT3G26880.1 (AT3G26880.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 64.7 bits (156), Expect = 5.0e-11
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 1 

Query: 34  LTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWCRLERPDAYVTFETFWP-ESK 93
           L VHC+SK++D+G+ +L   G+   ++FK NFWGTT FWC L +   Y  +      ++ 
Sbjct: 40  LKVHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQAI 99

Query: 94  NTWLRDRCRNGTQGTCLWIAKDDGIY 119
             + +D        +  W+A+DDGIY
Sbjct: 100 GLFAKD------GSSYNWLARDDGIY 118

[Close]
BLAST of CmaCh17G012280 vs. NCBI nr
Match: gi|659124355|ref|XP_008462115.1| (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 5.0e-53
Identity = 89/119 (74.79%), Postives = 99/119 (83.19%), Query Frame = 1 

Query: 16  PKPSRYYVHVANGLSTLPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWCRL 75
           PKPSRY+VHV NGLS   L VHCQSK+DDLG HHL NRGD++QWNF+ N WGTTLFWCRL
Sbjct: 16  PKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRL 75

Query: 76  ERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANNDELIHKWI 135
           E+PDAYV FE+FWPE+KN WLRDRC  G QGTC+W AKDDGIYL N P N DE +HKWI
Sbjct: 76  EKPDAYVAFESFWPETKNVWLRDRC--GNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWI 132

[Close]
BLAST of CmaCh17G012280 vs. NCBI nr
Match: gi|659116532|ref|XP_008458117.1| (PREDICTED: uncharacterized protein LOC103497646 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-51
Identity = 92/135 (68.15%), Postives = 107/135 (79.26%), Query Frame = 1 

Query: 1   MVAFVGAQVPGI-IYQPKPSRYYVHVANGLSTLPLTVHCQSKDDDLGIHHLPNRGDDFQW 60
           MV FV A+V  + +  P  +RYY+HV NGLS   L VHCQSKDDDLG HHL NRGDD+QW
Sbjct: 1   MVVFVKARVLRMTLPPPSVTRYYIHVMNGLSNADLIVHCQSKDDDLGYHHLANRGDDYQW 60

Query: 61  NFKVNFWGTTLFWCRLERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYL 120
           NFK NFW TTLFWC+LE+ + +V+FE+FWPESK+TWLRDRC  G QGTC+W AKDDGIYL
Sbjct: 61  NFKENFWQTTLFWCKLEKQNVHVSFESFWPESKSTWLRDRC--GYQGTCIWTAKDDGIYL 120

Query: 121 FNFPANNDELIHKWI 135
            N PAN DE +HKWI
Sbjct: 121 RNMPANIDEFVHKWI 133

[Close]
BLAST of CmaCh17G012280 vs. NCBI nr
Match: gi|659124347|ref|XP_008462110.1| (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo])

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50
Identity = 89/119 (74.79%), Postives = 98/119 (82.35%), Query Frame = 1 

Query: 16  PKPSRYYVHVANGLSTLPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWCRL 75
           P+PSRY+V+V NGLS   L VHCQSKDDDLG HHL N GD FQWNF+ NF+GTTLFWCRL
Sbjct: 27  PQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHHLVNHGDYFQWNFEENFFGTTLFWCRL 86

Query: 76  ERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANNDELIHKWI 135
           E+ DAYV FE+FWPES N WLRDRC  G QGTC+WIAKDDGIYL N P N DEL+HKWI
Sbjct: 87  EKSDAYVAFESFWPESTNRWLRDRC--GNQGTCVWIAKDDGIYLRNIPVNVDELVHKWI 143

[Close]
BLAST of CmaCh17G012280 vs. NCBI nr
Match: gi|449443925|ref|XP_004139726.1| (PREDICTED: uncharacterized protein LOC101206205 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-49
Identity = 91/135 (67.41%), Postives = 106/135 (78.52%), Query Frame = 1 

Query: 2   VAFVGA-QVPGIIYQP-KPSRYYVHVANGLSTLPLTVHCQSKDDDLGIHHLPNRGDDFQW 61
           +A VGA ++P   + P  P+RYYVHV NGLS   L VHCQSKD+DLG  HL NRGDDFQW
Sbjct: 13  LALVGADRIPRTPFVPVNPARYYVHVVNGLSNYDLGVHCQSKDNDLGYQHLINRGDDFQW 72

Query: 62  NFKVNFWGTTLFWCRLERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYL 121
           NFKVN +GTTLFWC+LE+ DAYV+FE+FWPES+N WLRDRC  G QG C+W AKDDGIYL
Sbjct: 73  NFKVNIFGTTLFWCKLEKQDAYVSFESFWPESRNFWLRDRC--GPQGNCIWTAKDDGIYL 132

Query: 122 FNFPANNDELIHKWI 135
            N P N DE +HKW+
Sbjct: 133 RNNPTNVDEYVHKWM 145

[Close]
BLAST of CmaCh17G012280 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 2.0e-49
Identity = 85/119 (71.43%), Postives = 95/119 (79.83%), Query Frame = 1 

Query: 16  PKPSRYYVHVANGLSTLPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKVNFWGTTLFWCRL 75
           P  SRY+VHV NGLS+  L VHC+SKDDDLG HH+ N GDDFQWNF+ NFWGTTLFWCRL
Sbjct: 16  PTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRL 75

Query: 76  ERPDAYVTFETFWPESKNTWLRDRCRNGTQGTCLWIAKDDGIYLFNFPANNDELIHKWI 135
           E P+AY  FE+FWPES+N WLR RC N   GTC+W AKDDGIYL N PAN DE +HKWI
Sbjct: 76  ENPEAYADFESFWPESRNLWLRYRCGN-QLGTCIWTAKDDGIYLRNMPANVDEFVHKWI 133

The following BLAST results are available for this feature:
BLAST of CmaCh17G012280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh17G012280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6N8_CUCSA3.6e-2645.26Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1[more]
M5VWE5_PRUPE1.4e-2545.60Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S... [more]
A0A0A0KA40_CUCSA9.8e-2441.32Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1[more]
B9IIH9_POPTR9.8e-2446.72Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s06720g PE=4 SV=2[more]
B9S575_RICCO1.7e-2346.04Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722060 PE=4 SV=1[more]
BLAST of CmaCh17G012280 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29035.15.9e-2040.98 Plant self-incompatibility protein S1 family[more]
AT4G16295.11.7e-1938.46 S-protein homologue 1[more]
AT5G04350.11.3e-1136.26 Plant self-incompatibility protein S1 family[more]
AT5G04347.12.2e-1136.61 Plant self-incompatibility protein S1 family[more]
AT3G26880.15.0e-1136.05 Plant self-incompatibility protein S1 family[more]
BLAST of CmaCh17G012280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659124355|ref|XP_008462115.1|5.0e-5374.79PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo][more]
gi|659116532|ref|XP_008458117.1|1.2e-5168.15PREDICTED: uncharacterized protein LOC103497646 [Cucumis melo][more]
gi|659124347|ref|XP_008462110.1|1.8e-5074.79PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo][more]
gi|449443925|ref|XP_004139726.1|1.1e-4967.41PREDICTED: uncharacterized protein LOC101206205 [Cucumis sativus][more]
gi|449443935|ref|XP_004139731.1|2.0e-4971.43PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G012280.1CmaCh17G012280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 23..133
score: 1.8
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 18..133
score: 7.4
NoneNo IPR availablePANTHERPTHR31232:SF7S PROTEIN HOMOLOGUE 74-RELATEDcoord: 18..133
score: 7.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G012280Cucsa.078540Cucumber (Gy14) v1cgycmaB0138
CmaCh17G012280Csa7G333910Cucumber (Chinese Long) v2cmacuB384
CmaCh17G012280ClCG09G009370Watermelon (Charleston Gray)cmawcgB309
CmaCh17G012280CSPI07G13740Wild cucumber (PI 183967)cmacpiB388
CmaCh17G012280Lsi02G020480Bottle gourd (USVL1VR-Ls)cmalsiB346
CmaCh17G012280CsaV3_7G025540Cucumber (Chinese Long) v3cmacucB0457
CmaCh17G012280Bhi09G001171Wax gourdcmawgoB0493
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G012280Silver-seed gourdcarcmaB0107
CmaCh17G012280Cucumber (Chinese Long) v3cmacucB0462
CmaCh17G012280Watermelon (97103) v2cmawmbB390
CmaCh17G012280Cucurbita maxima (Rimu)cmacmaB378
CmaCh17G012280Cucumber (Gy14) v1cgycmaB0137
CmaCh17G012280Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G012280Cucurbita moschata (Rifu)cmacmoB369
CmaCh17G012280Watermelon (97103) v1cmawmB331
CmaCh17G012280Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G012280Cucurbita pepo (Zucchini)cmacpeB385
CmaCh17G012280Cucumber (Gy14) v2cgybcmaB926
CmaCh17G012280Cucumber (Gy14) v2cgybcmaB920