CmaCh17G000880.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G000880.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Serine hydroxymethyltransferase
Location	Cma_Chr17 : 448792 .. 451429 (-)
Sequence length	1938

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCACAAATCCCCTCATCTGAAAATTGTCTTGCCCCCATTTTTCATCTTCTTCTTCTTCTTCTTCTACTACTCAAATTTCTCTGTAATTTCTCTTTTCTCGCCATGGATCCCGTCAATGCTTGGGGCAATACTCCTCTCGTAAACGTTGACCCTGAGATCTTCGATTTGATCGAGAAGGAGAAGCGTCGCCAATGCCGCGGAATCGAGCTCATTGCTTCTGAAAATTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGAAGTTCCCTGACCAACAAGTACTCCGAGGGCATGCCGGGGAACCGATACTACGGTGGAAACGAGTTCATCGATGAGATCGAGAATCTCTGCCGTTCTCGAGCTCTCCAAGCTTTCCATGTCGATCCAGCCAAATGGGGCGTTAATGTCCAGCCCTACTCTGGTTCTCCGGCGAATTTCGCCGCCTACACCGCGTTGCTTCAGCCGCATGATCGGATTATGGGGCTGGATCTTCCTTCTGGTGGTCATTTGACGCATGGTTACTACACCTCTGGAGGGAAGAAGATCTCCGCTACCTCGATTTACTTCGAGAGTTTGCCTTACAAGGTTGATTCCGCCACTGGATTTATTGATTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATTATCTGTGGTGGCAGTGCGTACCCGAGGGACTGGGATTATGCCAGATTCAGGGCAATTGCTGATAAATGCGGTGCCCTTCTGCTCTGTGATATGGCTCACATTAGTGGTCTCGTTGCTGCTCAGGTATATAATGAAACAAATCTATGAATTGAGTTCTATAACTTATCATTTTATCTTGCAAAAGTTGCCAATTGGATGTTGTTTTCCATTTCTGAATTTGGATCTGCTGGTTTATGTTGATTAGGAATAGTCAGAAATGGCACAGGTTTTCAGATCTATAATTGTTTGAGCATCTTACGAAGCAGGATCTGGCATACTAAGAAGCTTATTTAATGCCTAATTATCGATGCTACATTGCTTCTTTGTAACAGAAGATGAATTATGTTCAATGGATTTATGGAACGGTTATGTTTTCAATTGTTTCTTACAAACATTTTGCATTCCTTGTTCTTATAATTAAGTTTTAAATGCTAGATTAAAATCGAAATGAAGATCTACTTGGAGAAAATGGATAGATTTCTGCCTCGTTTTGTTTTGAACTGATATTATGATTGCTTATGATCTCTATTTCTTTTCTTGCACAACTTAAGCGAGTTGGGTCTGGCTGGTATTTTAAAATATTGATATGCAATGATCGTTTGCAGGAAGCTGCGAACCCGTTCGAGTACTGTGACGTCGTGACGACCACGACTCACAAGAGTTTGAGGGGTCCTAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCGCCTAAGAAGGGTCAGCCTGAGGATGCTGTCTATGACTTCGAAGACAAGATCAACTTCTCTGTGTTCCCAGCCCTTCAGGGTGGCCCTCACAATCATCAAATTGGCGCTTTAGCTGTTGCCTTGAAGCAGGCTATGTCCCCTGGGTTCAAGGTCTATGCGAAACAAGTTAAGGCCAATGCCGTGGCCCTTGGAAATTACCTGATGAACAAGGGCTACAAGCTTGTCACCGGAGGAACCGAGAATCATCTCGTTCTCTGGGATCTTCGTCCTTTGGGATTGACCGGTAATTTTGTGGAATCAATCTAAGAAAACTAACAGGAAGAACATATTCTGTTTTGGTAATGTAACAATGTTGTGGTAATTCCTTTTCCAGGCAACAAGGTCGAGAAGCTTTGCGACTTGTGCAACATCACTGTAAACAAAAACGCAGTGTTTGGCGACAGCAGCGCATTGGCTCCCGGAGGTGTTAGAATTGGTAAGTTACCGATATCATAATCCAGTCCTTAACTTGTTCTTCCTTTAATCATGATTAACAAGACATCGAATTGTGATGGTAATCGTTAGGTGCACCGGCCATGACTTCTCGAGGTTTGGTCGAGAAAGACTTCGAACAGATCGCTGAGTTCCTGCACCGTGCTGTAACCATCACCTTGAATGTCCAGAAGGAACATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGTAAACAACAAGGAAATCGAAGCGCTGAAGGCGGACGTCGAGAAATTTTCTGGCTCGTTCGAGATGCCGGGTTTTCTCATGTCTGAGATGAAGTACAAGGACTAGAAAGCAGGCAGACAACAAGATCTTCGGGAAAATTAATAAAGTTTTGGGTGTTGGTTGAATCTTTAAAATCATTTGCTTAAAGTTGAAAAAGTAAAAAAAAAAGATTGCCGTTTGTTTTGTTTGTTTTCCTTCTTTTACCACTTTGTAGACTTAGATTTCCATTCTCAATATATTCATTCCAAGATCTCCATTTTCATATTAATAATCACTATTTTTTATTAGTAATAGGATAATTCTGGGCCACTTTGGCCCATATTCAAACAAGCCGCAAGGCCCGTTTTTTTATAATTCTGGGCCACTGTGGCCCATATTCTTGCTCCTTCGTTTTATTTTGGGCTTTAGGAGGATTATAGGCCCATTGTTTTTGTAGTAGACATGATGCTGCACAACTTCGTTAATTATGCATAATATTAGAATAA

mRNA sequence

CTCACAAATCCCCTCATCTGAAAATTGTCTTGCCCCCATTTTTCATCTTCTTCTTCTTCTTCTTCTACTACTCAAATTTCTCTGTAATTTCTCTTTTCTCGCCATGGATCCCGTCAATGCTTGGGGCAATACTCCTCTCGTAAACGTTGACCCTGAGATCTTCGATTTGATCGAGAAGGAGAAGCGTCGCCAATGCCGCGGAATCGAGCTCATTGCTTCTGAAAATTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGAAGTTCCCTGACCAACAAGTACTCCGAGGGCATGCCGGGGAACCGATACTACGGTGGAAACGAGTTCATCGATGAGATCGAGAATCTCTGCCGTTCTCGAGCTCTCCAAGCTTTCCATGTCGATCCAGCCAAATGGGGCGTTAATGTCCAGCCCTACTCTGGTTCTCCGGCGAATTTCGCCGCCTACACCGCGTTGCTTCAGCCGCATGATCGGATTATGGGGCTGGATCTTCCTTCTGGTGGTCATTTGACGCATGGTTACTACACCTCTGGAGGGAAGAAGATCTCCGCTACCTCGATTTACTTCGAGAGTTTGCCTTACAAGGTTGATTCCGCCACTGGATTTATTGATTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATTATCTGTGGTGGCAGTGCGTACCCGAGGGACTGGGATTATGCCAGATTCAGGGCAATTGCTGATAAATGCGGTGCCCTTCTGCTCTGTGATATGGCTCACATTAGTGGTCTCGTTGCTGCTCAGGAAGCTGCGAACCCGTTCGAGTACTGTGACGTCGTGACGACCACGACTCACAAGAGTTTGAGGGGTCCTAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCGCCTAAGAAGGGTCAGCCTGAGGATGCTGTCTATGACTTCGAAGACAAGATCAACTTCTCTGTGTTCCCAGCCCTTCAGGGTGGCCCTCACAATCATCAAATTGGCGCTTTAGCTGTTGCCTTGAAGCAGGCTATGTCCCCTGGGTTCAAGGTCTATGCGAAACAAGTTAAGGCCAATGCCGTGGCCCTTGGAAATTACCTGATGAACAAGGGCTACAAGCTTGTCACCGGAGGAACCGAGAATCATCTCGTTCTCTGGGATCTTCGTCCTTTGGGATTGACCGGCAACAAGGTCGAGAAGCTTTGCGACTTGTGCAACATCACTGTAAACAAAAACGCAGTGTTTGGCGACAGCAGCGCATTGGCTCCCGGAGGTGTTAGAATTGGTGCACCGGCCATGACTTCTCGAGGTTTGGTCGAGAAAGACTTCGAACAGATCGCTGAGTTCCTGCACCGTGCTGTAACCATCACCTTGAATGTCCAGAAGGAACATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGTAAACAACAAGGAAATCGAAGCGCTGAAGGCGGACGTCGAGAAATTTTCTGGCTCGTTCGAGATGCCGGGTTTTCTCATGTCTGAGATGAAGTACAAGGACTAGAAAGCAGGCAGACAACAAGATCTTCGGGAAAATTAATAAAGTTTTGGGTGTTGGTTGAATCTTTAAAATCATTTGCTTAAAGTTGAAAAAGTAAAAAAAAAAGATTGCCGTTTGTTTTGTTTGTTTTCCTTCTTTTACCACTTTGTAGACTTAGATTTCCATTCTCAATATATTCATTCCAAGATCTCCATTTTCATATTAATAATCACTATTTTTTATTAGTAATAGGATAATTCTGGGCCACTTTGGCCCATATTCAAACAAGCCGCAAGGCCCGTTTTTTTATAATTCTGGGCCACTGTGGCCCATATTCTTGCTCCTTCGTTTTATTTTGGGCTTTAGGAGGATTATAGGCCCATTGTTTTTGTAGTAGACATGATGCTGCACAACTTCGTTAATTATGCATAATATTAGAATAA

Coding sequence (CDS)

ATGGATCCCGTCAATGCTTGGGGCAATACTCCTCTCGTAAACGTTGACCCTGAGATCTTCGATTTGATCGAGAAGGAGAAGCGTCGCCAATGCCGCGGAATCGAGCTCATTGCTTCTGAAAATTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGAAGTTCCCTGACCAACAAGTACTCCGAGGGCATGCCGGGGAACCGATACTACGGTGGAAACGAGTTCATCGATGAGATCGAGAATCTCTGCCGTTCTCGAGCTCTCCAAGCTTTCCATGTCGATCCAGCCAAATGGGGCGTTAATGTCCAGCCCTACTCTGGTTCTCCGGCGAATTTCGCCGCCTACACCGCGTTGCTTCAGCCGCATGATCGGATTATGGGGCTGGATCTTCCTTCTGGTGGTCATTTGACGCATGGTTACTACACCTCTGGAGGGAAGAAGATCTCCGCTACCTCGATTTACTTCGAGAGTTTGCCTTACAAGGTTGATTCCGCCACTGGATTTATTGATTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATTATCTGTGGTGGCAGTGCGTACCCGAGGGACTGGGATTATGCCAGATTCAGGGCAATTGCTGATAAATGCGGTGCCCTTCTGCTCTGTGATATGGCTCACATTAGTGGTCTCGTTGCTGCTCAGGAAGCTGCGAACCCGTTCGAGTACTGTGACGTCGTGACGACCACGACTCACAAGAGTTTGAGGGGTCCTAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCGCCTAAGAAGGGTCAGCCTGAGGATGCTGTCTATGACTTCGAAGACAAGATCAACTTCTCTGTGTTCCCAGCCCTTCAGGGTGGCCCTCACAATCATCAAATTGGCGCTTTAGCTGTTGCCTTGAAGCAGGCTATGTCCCCTGGGTTCAAGGTCTATGCGAAACAAGTTAAGGCCAATGCCGTGGCCCTTGGAAATTACCTGATGAACAAGGGCTACAAGCTTGTCACCGGAGGAACCGAGAATCATCTCGTTCTCTGGGATCTTCGTCCTTTGGGATTGACCGGCAACAAGGTCGAGAAGCTTTGCGACTTGTGCAACATCACTGTAAACAAAAACGCAGTGTTTGGCGACAGCAGCGCATTGGCTCCCGGAGGTGTTAGAATTGGTGCACCGGCCATGACTTCTCGAGGTTTGGTCGAGAAAGACTTCGAACAGATCGCTGAGTTCCTGCACCGTGCTGTAACCATCACCTTGAATGTCCAGAAGGAACATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGTAAACAACAAGGAAATCGAAGCGCTGAAGGCGGACGTCGAGAAATTTTCTGGCTCGTTCGAGATGCCGGGTTTTCTCATGTCTGAGATGAAGTACAAGGACTAG

Protein sequence

MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD

Homology

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BLAST of CmaCh17G000880.1 vs. Swiss-Prot
Match: GLYC4_ARATH (Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 5.6e-261
Identity = 431/471 (91.51%), Postives = 456/471 (96.82%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PV++WGNT LV+VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EG+PGNRYYGGNEFIDEIENLCRSRAL+AFH DPA WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDYARFRAIADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE AVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA +PGFKVYAKQVKANAVALGNYLM+KGY++VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLC+IT+NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFL RAVT+TL
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           ++QK +GKLLKDFNKGLVNNK+++ LKADVEKFS S+EMPGFLMSEMKYKD
Sbjct: 421 DIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. Swiss-Prot
Match: GLYC5_ARATH (Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana GN=SHM5 PE=3 SV=1)

HSP 1 Score: 811.6 bits (2095), Expect = 4.5e-234
Identity = 381/468 (81.41%), Postives = 430/468 (91.88%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PV +WGNT L  VDPEI+DLIEKEK RQCRGIELIA+ENFTS AV+EALGS LTNKYS
Sbjct: 1   MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGG EFIDEIE+LCRSR+L+AFH +P KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGH+THGYY+SGGK ISATSIYFE+LPYKVDS TG+IDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGG++YPR+WDYARFRA+ADK GA LLCDMAH S LVAAQEAA+PFEYCDVVTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           +THKSLRGPRAGMIFYRKGPKP KKGQPE  VYDF+ KIN +VFPALQ GPHN++IGALA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQ M+P FKVYAKQVKANA  L +YL+NKGY LVT GT+NHL+LWDLRPLGLTGNKV
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EK+C+LC IT+N+NAVFGD+S LAPGGVRIG PAMTSRGLVEKDFE+I EFLHRAVTITL
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMK 469
           ++Q+++GK++KDFNKGLVNNKEI+ +KADVE+F+  F+MPGF +SE +
Sbjct: 421 DIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESR 468

[Close]

BLAST of CmaCh17G000880.1 vs. Swiss-Prot
Match: GLYC7_ARATH (Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana GN=SHM7 PE=2 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 4.1e-179
Identity = 295/466 (63.30%), Postives = 368/466 (78.97%), Query Frame = 1


Query: 4   VNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGM 63
           V AWG+ P+   DP+I +L+EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 130 VRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGM 189

Query: 64  PGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IENLC  RAL AF ++  KWGVNVQPYS + ANFA YT LL P +R
Sbjct: 190 PGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGER 249

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGY T GGKKISA SI+FES PYKV+  TG+IDYDKLE+KALD+RPK
Sbjct: 250 IMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPK 309

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDWD+AR R IADKCGA+L+CDMAHISGLVA +E +NPF++CD+VT+TTH
Sbjct: 310 ILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTH 369

Query: 244 KSLRGPRAGMIFYRKGPKPPKKGQ-----PEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           K LRGPR G+IFYR+GPK  K+G           YD E+KINF+VFP+LQGGPHN+ I A
Sbjct: 370 KGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIAA 429

Query: 304 LAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQ  +P +K Y +Q+K NA AL   L+ +  +LVTGGT+NHL+LWDL P+GLTG 
Sbjct: 430 LAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGK 489

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTI 423
             EK+C++C+IT+NK A+FGD+  ++PGGVRIG PAMT+RG +E DFE +A+FL +A  I
Sbjct: 490 VYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQI 549

Query: 424 TLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLM 465
           T  +Q+EHGK  K+F K L  NK+I  L+  VE F+  +EMP  L+
Sbjct: 550 TSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPASLI 595

[Close]

BLAST of CmaCh17G000880.1 vs. Swiss-Prot
Match: GLYC6_ARATH (Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana GN=SHM6 PE=2 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 1.6e-178
Identity = 297/466 (63.73%), Postives = 369/466 (79.18%), Query Frame = 1


Query: 4   VNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGM 63
           V AWGN  +   DPEI + +EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGM 193

Query: 64  PGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IE LC+ RAL AF ++  KWGVNVQPYS + ANFA +T LL P +R
Sbjct: 194 PGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGER 253

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGYYT GGKK+S  SI+FES PYKVD  TG+IDYDKLEEKALD+RPK
Sbjct: 254 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPK 313

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDW++ RFR IADKCGA+L+ DMA ISGLVAA+E+ NPF+YCD+VT+TTH
Sbjct: 314 ILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTH 373

Query: 244 KSLRGPRAGMIFYRKGPKPPKKG-----QPEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           KSLRGPR G+IFY++G KP K+         +  YDFE+KINFSVFP+LQGGPHN+ I A
Sbjct: 374 KSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAA 433

Query: 304 LAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQA SP +K+Y +QVK NA AL + L+++  KL+TGGT+NHL+LWDL PLGLTG 
Sbjct: 434 LAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGK 493

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTI 423
             EK+C++C+ITVNK A+F ++  ++PGGVRIG+PAMTSRG +E +FE +A+FL+RA  I
Sbjct: 494 VYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQI 553

Query: 424 TLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLM 465
               Q+EHGKL K+  K + + KEI  L+  VE F+  F MP F M
Sbjct: 554 ASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM 599

[Close]

BLAST of CmaCh17G000880.1 vs. Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.4e-174
Identity = 301/454 (66.30%), Postives = 363/454 (79.96%), Query Frame = 1


Query: 8   GNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGMPGNR 67
           GNTPL  VD EIF+L+ +EK RQ +G+ELIASENFTS AV+EALGS  TNKY+EG PG+R
Sbjct: 6   GNTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSR 65

Query: 68  YYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGL 127
           YYGG E +DE+E LC+ RAL+AF +D +KWGVNVQPYSGSPANFA YTALL+PHDRIMGL
Sbjct: 66  YYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGL 125

Query: 128 DLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPKLIIC 187
           DLPSGGHLTHGY T   KKISA+SI+FES+PY++  A G IDY +LEE AL F+PKLII 
Sbjct: 126 DLPSGGHLTHGYQTDK-KKISASSIFFESMPYQI-GADGLIDYQRLEENALLFKPKLIIS 185

Query: 188 GGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLR 247
           G SAYPR+WDY R RAIADK GA L+CDMAH SGLVAAQ   +PF+YCDVVT+TTHK+LR
Sbjct: 186 GASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLR 245

Query: 248 GPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAM 307
           GPR+G+IF+R+G +    G+ E   YD E KINF+VFP+LQGGPH + I  +AVALK+A 
Sbjct: 246 GPRSGIIFFRRGKRVDGNGK-EIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEAD 305

Query: 308 SPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLC 367
           S  FK YA QVK NA A+GN LMNKGYKLVT GT+NHL+LWDLRP  LTGNK EK  D+ 
Sbjct: 306 SQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIA 365

Query: 368 NITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITLNVQKEHG 427
           NITVNKNAV GD++A++PGG+RIG+ A+TSRGL E DFE+IA+FL R V+I+L +Q   G
Sbjct: 366 NITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGRVG 425

Query: 428 KLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPG 462
           K L DF   +  +KE+  L+ +VE+FS  F +PG
Sbjct: 426 KKLVDFVVEINKSKELLDLRKEVEEFSSKFTLPG 456

[Close]

BLAST of CmaCh17G000880.1 vs. TrEMBL
Match: A0A0A0LKC8_CUCSA (Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_2G145880 PE=3 SV=1)

HSP 1 Score: 950.7 bits (2456), Expect = 6.9e-274
Identity = 459/471 (97.45%), Postives = 465/471 (98.73%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVN WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHCDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           NVQKE+GKLLKDFNKGLVNNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NVQKEYGKLLKDFNKGLVNNKEIEKLKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. TrEMBL
Match: A0A061ES58_THECC (Serine hydroxymethyltransferase OS=Theobroma cacao GN=TCM_020228 PE=3 SV=1)

HSP 1 Score: 922.2 bits (2382), Expect = 2.6e-265
Identity = 438/471 (92.99%), Postives = 461/471 (97.88%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVNAWGN+ L +VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNAWGNSSLESVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCR+RALQAFH+DP KWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRARALQAFHLDPTKWGVNVQPYSGSPANFAAYTAILQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S+TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRA+ADKCGALLLCDMAHISGLVAAQEAANPFE+CD+VTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEFCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLM+KGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMSKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG PAMTSRGL+EKDFEQI EFLH+AVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHQAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           N+QK++GKLLKDFNKGLVNNKEIE LKADVEKF+ SF+MPGF MSEMKYKD
Sbjct: 421 NIQKQYGKLLKDFNKGLVNNKEIEELKADVEKFASSFDMPGFKMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. TrEMBL
Match: M5XDY2_PRUPE (Serine hydroxymethyltransferase OS=Prunus persica GN=PRUPE_ppa005242mg PE=3 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 2.9e-264
Identity = 437/471 (92.78%), Postives = 458/471 (97.24%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PVN WGN+PLV VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MEPVNDWGNSPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH+D AKWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHLDAAKWGVNVQPYSGSPANFAAYTAVLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RP+LIICGGSAYPRDWDYARFR++ADKCGALLLCDMAHISGLVAAQEAANPFEYCD+VTT
Sbjct: 181 RPRLIICGGSAYPRDWDYARFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDA YDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAAYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVALGNYL++K Y LVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLISKDYNLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSAL+PGGVRIGAPAMTSRGLVEKDFE+I EFLHRAV++TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALSPGGVRIGAPAMTSRGLVEKDFEKIGEFLHRAVSLTL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
            +QKEHGKLLKDFNKGLVNNK+IE LKADVEKFS SFEMPGF+MSEMKYKD
Sbjct: 421 KIQKEHGKLLKDFNKGLVNNKDIEELKADVEKFSASFEMPGFVMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. TrEMBL
Match: A0A067KWI2_JATCU (Serine hydroxymethyltransferase OS=Jatropha curcas GN=JCGZ_01085 PE=3 SV=1)

HSP 1 Score: 916.8 bits (2368), Expect = 1.1e-263
Identity = 437/471 (92.78%), Postives = 458/471 (97.24%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPV+ WGN+ L  VDP+I DLIEKEKRRQC GIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVSVWGNSSLQTVDPDIHDLIEKEKRRQCSGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH+DP KWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHLDPTKWGVNVQPYSGSPANFAAYTAVLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYA+F+++ADKCGALLLCDMAHISGLVAAQEAANPFEYCD+VTT
Sbjct: 181 RPKLIICGGSAYPRDWDYAKFKSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA +PGFKVYAKQVKANAVALGNYLM++GYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQATTPGFKVYAKQVKANAVALGNYLMSQGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG PAMTSRGLVEKDFEQI EFLHRAVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEQIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
            +QKEHGKLLKDFNKGLVNNK+IEALKADVEKF+ SF+MPGFL+SEMKYKD
Sbjct: 421 KIQKEHGKLLKDFNKGLVNNKDIEALKADVEKFALSFDMPGFLVSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. TrEMBL
Match: A9PCX3_POPTR (Serine hydroxymethyltransferase OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 916.0 bits (2366), Expect = 1.9e-263
Identity = 437/471 (92.78%), Postives = 456/471 (96.82%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPV  WGN+ L  VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVTVWGNSSLQTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNE+IDEIENLCR+RALQAFH+DP KWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEYIDEIENLCRARALQAFHLDPTKWGVNVQPYSGSPANFAAYTAVLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TGF+DYD+LEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNPQTGFLDYDRLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY +FR++ADKCGALLLCDMAHISGLVAAQEAANPFEYCD+VTT
Sbjct: 181 RPKLIICGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA SPGFK YAKQVKANAVALGNYLM+KGYKLVT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAQSPGFKAYAKQVKANAVALGNYLMSKGYKLVTEGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDL NITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFLHRAVTITL
Sbjct: 361 EKLCDLANITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           ++QKEHGKLLKDFNKGLVNNKEIEALKADVE+FSGSFEMPGFLMSEMKYKD
Sbjct: 421 SIQKEHGKLLKDFNKGLVNNKEIEALKADVEQFSGSFEMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. TAIR10
Match: AT4G13930.1 (AT4G13930.1 serine hydroxymethyltransferase 4)

HSP 1 Score: 901.0 bits (2327), Expect = 3.2e-262
Identity = 431/471 (91.51%), Postives = 456/471 (96.82%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PV++WGNT LV+VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EG+PGNRYYGGNEFIDEIENLCRSRAL+AFH DPA WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDYARFRAIADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE AVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA +PGFKVYAKQVKANAVALGNYLM+KGY++VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLC+IT+NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFL RAVT+TL
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           ++QK +GKLLKDFNKGLVNNK+++ LKADVEKFS S+EMPGFLMSEMKYKD
Sbjct: 421 DIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. TAIR10
Match: AT4G13890.1 (AT4G13890.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein)

HSP 1 Score: 811.6 bits (2095), Expect = 2.5e-235
Identity = 381/468 (81.41%), Postives = 430/468 (91.88%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PV +WGNT L  VDPEI+DLIEKEK RQCRGIELIA+ENFTS AV+EALGS LTNKYS
Sbjct: 1   MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGG EFIDEIE+LCRSR+L+AFH +P KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGH+THGYY+SGGK ISATSIYFE+LPYKVDS TG+IDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGG++YPR+WDYARFRA+ADK GA LLCDMAH S LVAAQEAA+PFEYCDVVTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           +THKSLRGPRAGMIFYRKGPKP KKGQPE  VYDF+ KIN +VFPALQ GPHN++IGALA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQ M+P FKVYAKQVKANA  L +YL+NKGY LVT GT+NHL+LWDLRPLGLTGNKV
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EK+C+LC IT+N+NAVFGD+S LAPGGVRIG PAMTSRGLVEKDFE+I EFLHRAVTITL
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMK 469
           ++Q+++GK++KDFNKGLVNNKEI+ +KADVE+F+  F+MPGF +SE +
Sbjct: 421 DIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESR 468

[Close]

BLAST of CmaCh17G000880.1 vs. TAIR10
Match: AT1G36370.1 (AT1G36370.1 serine hydroxymethyltransferase 7)

HSP 1 Score: 629.0 bits (1621), Expect = 2.3e-180
Identity = 295/466 (63.30%), Postives = 368/466 (78.97%), Query Frame = 1


Query: 4   VNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGM 63
           V AWG+ P+   DP+I +L+EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 130 VRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGM 189

Query: 64  PGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IENLC  RAL AF ++  KWGVNVQPYS + ANFA YT LL P +R
Sbjct: 190 PGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGER 249

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGY T GGKKISA SI+FES PYKV+  TG+IDYDKLE+KALD+RPK
Sbjct: 250 IMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPK 309

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDWD+AR R IADKCGA+L+CDMAHISGLVA +E +NPF++CD+VT+TTH
Sbjct: 310 ILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTH 369

Query: 244 KSLRGPRAGMIFYRKGPKPPKKGQ-----PEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           K LRGPR G+IFYR+GPK  K+G           YD E+KINF+VFP+LQGGPHN+ I A
Sbjct: 370 KGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIAA 429

Query: 304 LAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQ  +P +K Y +Q+K NA AL   L+ +  +LVTGGT+NHL+LWDL P+GLTG 
Sbjct: 430 LAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGK 489

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTI 423
             EK+C++C+IT+NK A+FGD+  ++PGGVRIG PAMT+RG +E DFE +A+FL +A  I
Sbjct: 490 VYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQI 549

Query: 424 TLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLM 465
           T  +Q+EHGK  K+F K L  NK+I  L+  VE F+  +EMP  L+
Sbjct: 550 TSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPASLI 595

[Close]

BLAST of CmaCh17G000880.1 vs. TAIR10
Match: AT1G22020.1 (AT1G22020.1 serine hydroxymethyltransferase 6)

HSP 1 Score: 627.1 bits (1616), Expect = 8.8e-180
Identity = 297/466 (63.73%), Postives = 369/466 (79.18%), Query Frame = 1


Query: 4   VNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGM 63
           V AWGN  +   DPEI + +EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGM 193

Query: 64  PGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IE LC+ RAL AF ++  KWGVNVQPYS + ANFA +T LL P +R
Sbjct: 194 PGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGER 253

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGYYT GGKK+S  SI+FES PYKVD  TG+IDYDKLEEKALD+RPK
Sbjct: 254 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPK 313

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDW++ RFR IADKCGA+L+ DMA ISGLVAA+E+ NPF+YCD+VT+TTH
Sbjct: 314 ILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTH 373

Query: 244 KSLRGPRAGMIFYRKGPKPPKKG-----QPEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           KSLRGPR G+IFY++G KP K+         +  YDFE+KINFSVFP+LQGGPHN+ I A
Sbjct: 374 KSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAA 433

Query: 304 LAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQA SP +K+Y +QVK NA AL + L+++  KL+TGGT+NHL+LWDL PLGLTG 
Sbjct: 434 LAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGK 493

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTI 423
             EK+C++C+ITVNK A+F ++  ++PGGVRIG+PAMTSRG +E +FE +A+FL+RA  I
Sbjct: 494 VYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQI 553

Query: 424 TLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLM 465
               Q+EHGKL K+  K + + KEI  L+  VE F+  F MP F M
Sbjct: 554 ASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM 599

[Close]

BLAST of CmaCh17G000880.1 vs. TAIR10
Match: AT4G32520.1 (AT4G32520.1 serine hydroxymethyltransferase 3)

HSP 1 Score: 560.1 bits (1442), Expect = 1.3e-159
Identity = 277/456 (60.75%), Postives = 341/456 (74.78%), Query Frame = 1


Query: 12  LVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGMPGNRYYGG 71
           L  VDPE+  +I KEK RQ R +ELIASENFTS AV+EA+GS LTNKYSEG+PG RYYGG
Sbjct: 83  LGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142

Query: 72  NEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPS 131
           NE+ID++E LC++RAL AF +D  KWGVNVQP SGSPANFA YTA+L PHDRIMGLDLP 
Sbjct: 143 NEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHDRIMGLDLPH 202

Query: 132 GGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPKLIICGGSA 191
           GGHL+HG+ T+  +++S TSIYFES+PY++D +TG +DYD LE+ A  FRPKLII G SA
Sbjct: 203 GGHLSHGFMTA-KRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKLIIAGASA 262

Query: 192 YPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRA 251
           Y RD+DY R R IAD  GA L+ DMAHISGLVAA   A+PFEYCD+VTTTTHKSLRGPR 
Sbjct: 263 YSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRG 322

Query: 252 GMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAMSPGF 311
           GMIF+RK P             D E  +N +VFP LQGGPHNH IG LAV LK A SP F
Sbjct: 323 GMIFFRKDPING---------VDLESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 382

Query: 312 KVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITV 371
           K Y K+V +N  AL N L+  G+KLV+GG++NHLVL DLRP+G+ G +VEK+ D+ +IT+
Sbjct: 383 KAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITL 442

Query: 372 NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITLNVQK-EHGKLL 431
           NKN+V GD SAL PGG+RIG+PAMT+RGL EKDF  +A+F+   V IT+  +K   G  L
Sbjct: 443 NKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKL 502

Query: 432 KDFNKGLVN-----NKEIEALKADVEKFSGSFEMPG 462
           +DFNK + +      + +++LK  VE F+  F +PG
Sbjct: 503 QDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPG 528

[Close]

BLAST of CmaCh17G000880.1 vs. NCBI nr
Match: gi|449442395|ref|XP_004138967.1| (PREDICTED: serine hydroxymethyltransferase 4 [Cucumis sativus])

HSP 1 Score: 950.7 bits (2456), Expect = 9.9e-274
Identity = 459/471 (97.45%), Postives = 465/471 (98.73%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVN WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHCDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           NVQKE+GKLLKDFNKGLVNNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NVQKEYGKLLKDFNKGLVNNKEIEKLKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. NCBI nr
Match: gi|659114777|ref|XP_008457222.1| (PREDICTED: serine hydroxymethyltransferase 4 [Cucumis melo])

HSP 1 Score: 945.3 bits (2442), Expect = 4.1e-272
Identity = 456/471 (96.82%), Postives = 462/471 (98.09%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVN WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAF  DP KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFRCDPTKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           N+QKE+GKLLKDFNKGLVNNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. NCBI nr
Match: gi|590656253|ref|XP_007034218.1| (Serine hydroxymethyltransferase 4 isoform 1 [Theobroma cacao])

HSP 1 Score: 922.2 bits (2382), Expect = 3.8e-265
Identity = 438/471 (92.99%), Postives = 461/471 (97.88%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVNAWGN+ L +VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNAWGNSSLESVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCR+RALQAFH+DP KWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRARALQAFHLDPTKWGVNVQPYSGSPANFAAYTAILQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S+TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRA+ADKCGALLLCDMAHISGLVAAQEAANPFE+CD+VTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEFCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLM+KGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMSKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG PAMTSRGL+EKDFEQI EFLH+AVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHQAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           N+QK++GKLLKDFNKGLVNNKEIE LKADVEKF+ SF+MPGF MSEMKYKD
Sbjct: 421 NIQKQYGKLLKDFNKGLVNNKEIEELKADVEKFASSFDMPGFKMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880.1 vs. NCBI nr
Match: gi|729472659|ref|XP_010527458.1| (PREDICTED: serine hydroxymethyltransferase 4 [Tarenaya hassleriana])

HSP 1 Score: 919.8 bits (2376), Expect = 1.9e-264
Identity = 442/471 (93.84%), Postives = 457/471 (97.03%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MD V++WGNTPLV VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDSVSSWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH+DP+KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHLDPSKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TG+IDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDYAR RAIADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARLRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVAL NYLM+KGY +VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALANYLMSKGYSIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNIT+NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFLHRAVTITL
Sbjct: 361 EKLCDLCNITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           NVQKE GKLLKDFNKGLVNNKEIE LKADVEKFSGS+EMPGFLM+EMKYKD
Sbjct: 421 NVQKEFGKLLKDFNKGLVNNKEIEELKADVEKFSGSYEMPGFLMAEMKYKD 471

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BLAST of CmaCh17G000880.1 vs. NCBI nr
Match: gi|596161140|ref|XP_007222930.1| (hypothetical protein PRUPE_ppa005242mg [Prunus persica])

HSP 1 Score: 918.7 bits (2373), Expect = 4.2e-264
Identity = 437/471 (92.78%), Postives = 458/471 (97.24%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PVN WGN+PLV VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MEPVNDWGNSPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH+D AKWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHLDAAKWGVNVQPYSGSPANFAAYTAVLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RP+LIICGGSAYPRDWDYARFR++ADKCGALLLCDMAHISGLVAAQEAANPFEYCD+VTT
Sbjct: 181 RPRLIICGGSAYPRDWDYARFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDA YDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAAYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVALGNYL++K Y LVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLISKDYNLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSAL+PGGVRIGAPAMTSRGLVEKDFE+I EFLHRAV++TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALSPGGVRIGAPAMTSRGLVEKDFEKIGEFLHRAVSLTL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
            +QKEHGKLLKDFNKGLVNNK+IE LKADVEKFS SFEMPGF+MSEMKYKD
Sbjct: 421 KIQKEHGKLLKDFNKGLVNNKDIEELKADVEKFSASFEMPGFVMSEMKYKD 471

The following BLAST results are available for this feature:

BLAST of CmaCh17G000880.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GLYC4_ARATH	5.6e-261	91.51	Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1	[more]
GLYC5_ARATH	4.5e-234	81.41	Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana GN=SHM5 PE=3 SV=1	[more]
GLYC7_ARATH	4.1e-179	63.30	Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana GN=SHM7 PE=2 SV=1	[more]
GLYC6_ARATH	1.6e-178	63.73	Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana GN=SHM6 PE=2 SV=1	[more]
GLYC1_DICDI	1.4e-174	66.30	Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1	[more]

BLAST of CmaCh17G000880.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKC8_CUCSA	6.9e-274	97.45	Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_2G145880 PE=3 SV=1	[more]
A0A061ES58_THECC	2.6e-265	92.99	Serine hydroxymethyltransferase OS=Theobroma cacao GN=TCM_020228 PE=3 SV=1	[more]
M5XDY2_PRUPE	2.9e-264	92.78	Serine hydroxymethyltransferase OS=Prunus persica GN=PRUPE_ppa005242mg PE=3 SV=1	[more]
A0A067KWI2_JATCU	1.1e-263	92.78	Serine hydroxymethyltransferase OS=Jatropha curcas GN=JCGZ_01085 PE=3 SV=1	[more]
A9PCX3_POPTR	1.9e-263	92.78	Serine hydroxymethyltransferase OS=Populus trichocarpa PE=2 SV=1	[more]

BLAST of CmaCh17G000880.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13930.1	3.2e-262	91.51	serine hydroxymethyltransferase 4	[more]
AT4G13890.1	2.5e-235	81.41	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein	[more]
AT1G36370.1	2.3e-180	63.30	serine hydroxymethyltransferase 7	[more]
AT1G22020.1	8.8e-180	63.73	serine hydroxymethyltransferase 6	[more]
AT4G32520.1	1.3e-159	60.75	serine hydroxymethyltransferase 3	[more]

BLAST of CmaCh17G000880.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442395\|ref\|XP_004138967.1\|	9.9e-274	97.45	PREDICTED: serine hydroxymethyltransferase 4 [Cucumis sativus]	[more]
gi\|659114777\|ref\|XP_008457222.1\|	4.1e-272	96.82	PREDICTED: serine hydroxymethyltransferase 4 [Cucumis melo]	[more]
gi\|590656253\|ref\|XP_007034218.1\|	3.8e-265	92.99	Serine hydroxymethyltransferase 4 isoform 1 [Theobroma cacao]	[more]
gi\|729472659\|ref\|XP_010527458.1\|	1.9e-264	93.84	PREDICTED: serine hydroxymethyltransferase 4 [Tarenaya hassleriana]	[more]
gi\|596161140\|ref\|XP_007222930.1\|	4.2e-264	92.78	hypothetical protein PRUPE_ppa005242mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001085	Ser_HO-MeTrfase
IPR015421	PyrdxlP-dep_Trfase_major
IPR015422	PyrdxlP-dep_Trfase_dom1
IPR015424	PyrdxlP-dep_Trfase
IPR019798	Ser_HO-MeTrfase_PLP_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity
GO:0003824	catalytic activity
GO:0004372	glycine hydroxymethyltransferase activity
GO:0030170	pyridoxal phosphate binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006544	glycine metabolic process
GO:0006563	L-serine metabolic process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0032259	methylation
biological_process	GO:0035999	tetrahydrofolate interconversion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004372	glycine hydroxymethyltransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008168	methyltransferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh17G000880	CmaCh17G000880	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000880.1	CmaCh17G000880.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000880.1.three_prime_UTR.1	CmaCh17G000880.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000880.1.CDS.4	CmaCh17G000880.1.CDS.4	CDS
CmaCh17G000880.1.CDS.3	CmaCh17G000880.1.CDS.3	CDS
CmaCh17G000880.1.CDS.2	CmaCh17G000880.1.CDS.2	CDS
CmaCh17G000880.1.CDS.1	CmaCh17G000880.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000880.1.five_prime_UTR.1	CmaCh17G000880.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G000880.1.exon.4	CmaCh17G000880.1.exon.4	exon
CmaCh17G000880.1.exon.3	CmaCh17G000880.1.exon.3	exon
CmaCh17G000880.1.exon.2	CmaCh17G000880.1.exon.2	exon
CmaCh17G000880.1.exon.1	CmaCh17G000880.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001085	Serine hydroxymethyltransferase	HAMAP	MF_00051	SHMT	coord: 11..461 score: 42
IPR001085	Serine hydroxymethyltransferase	PIR	PIRSF000412	SHMT	coord: 1..466 score: 1.1E
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 1..467 score:
IPR001085	Serine hydroxymethyltransferase	PFAM	PF00464	SHMT	coord: 13..411 score: 7.1E
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GENE3D	G3DSA:3.40.640.10		coord: 41..312 score: 1.8
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GENE3D	G3DSA:3.90.1150.10		coord: 313..463 score: 3.7
IPR015424	Pyridoxal phosphate-dependent transferase	unknown	SSF53383	PLP-dependent transferases	coord: 4..463 score: 1.01E
IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	PROSITE	PS00096	SHMT	coord: 236..252 scor
None	No IPR available	PANTHER	PTHR11680:SF11	SUBFAMILY NOT NAMED	coord: 1..467 score: