CmaCh17G000880 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G000880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Serine hydroxymethyltransferase
Location	Cma_Chr17 : 448792 .. 451429 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCACAAATCCCCTCATCTGAAAATTGTCTTGCCCCCATTTTTCATCTTCTTCTTCTTCTTCTTCTACTACTCAAATTTCTCTGTAATTTCTCTTTTCTCGCCATGGATCCCGTCAATGCTTGGGGCAATACTCCTCTCGTAAACGTTGACCCTGAGATCTTCGATTTGATCGAGAAGGAGAAGCGTCGCCAATGCCGCGGAATCGAGCTCATTGCTTCTGAAAATTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGAAGTTCCCTGACCAACAAGTACTCCGAGGGCATGCCGGGGAACCGATACTACGGTGGAAACGAGTTCATCGATGAGATCGAGAATCTCTGCCGTTCTCGAGCTCTCCAAGCTTTCCATGTCGATCCAGCCAAATGGGGCGTTAATGTCCAGCCCTACTCTGGTTCTCCGGCGAATTTCGCCGCCTACACCGCGTTGCTTCAGCCGCATGATCGGATTATGGGGCTGGATCTTCCTTCTGGTGGTCATTTGACGCATGGTTACTACACCTCTGGAGGGAAGAAGATCTCCGCTACCTCGATTTACTTCGAGAGTTTGCCTTACAAGGTTGATTCCGCCACTGGATTTATTGATTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATTATCTGTGGTGGCAGTGCGTACCCGAGGGACTGGGATTATGCCAGATTCAGGGCAATTGCTGATAAATGCGGTGCCCTTCTGCTCTGTGATATGGCTCACATTAGTGGTCTCGTTGCTGCTCAGGTATATAATGAAACAAATCTATGAATTGAGTTCTATAACTTATCATTTTATCTTGCAAAAGTTGCCAATTGGATGTTGTTTTCCATTTCTGAATTTGGATCTGCTGGTTTATGTTGATTAGGAATAGTCAGAAATGGCACAGGTTTTCAGATCTATAATTGTTTGAGCATCTTACGAAGCAGGATCTGGCATACTAAGAAGCTTATTTAATGCCTAATTATCGATGCTACATTGCTTCTTTGTAACAGAAGATGAATTATGTTCAATGGATTTATGGAACGGTTATGTTTTCAATTGTTTCTTACAAACATTTTGCATTCCTTGTTCTTATAATTAAGTTTTAAATGCTAGATTAAAATCGAAATGAAGATCTACTTGGAGAAAATGGATAGATTTCTGCCTCGTTTTGTTTTGAACTGATATTATGATTGCTTATGATCTCTATTTCTTTTCTTGCACAACTTAAGCGAGTTGGGTCTGGCTGGTATTTTAAAATATTGATATGCAATGATCGTTTGCAGGAAGCTGCGAACCCGTTCGAGTACTGTGACGTCGTGACGACCACGACTCACAAGAGTTTGAGGGGTCCTAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCGCCTAAGAAGGGTCAGCCTGAGGATGCTGTCTATGACTTCGAAGACAAGATCAACTTCTCTGTGTTCCCAGCCCTTCAGGGTGGCCCTCACAATCATCAAATTGGCGCTTTAGCTGTTGCCTTGAAGCAGGCTATGTCCCCTGGGTTCAAGGTCTATGCGAAACAAGTTAAGGCCAATGCCGTGGCCCTTGGAAATTACCTGATGAACAAGGGCTACAAGCTTGTCACCGGAGGAACCGAGAATCATCTCGTTCTCTGGGATCTTCGTCCTTTGGGATTGACCGGTAATTTTGTGGAATCAATCTAAGAAAACTAACAGGAAGAACATATTCTGTTTTGGTAATGTAACAATGTTGTGGTAATTCCTTTTCCAGGCAACAAGGTCGAGAAGCTTTGCGACTTGTGCAACATCACTGTAAACAAAAACGCAGTGTTTGGCGACAGCAGCGCATTGGCTCCCGGAGGTGTTAGAATTGGTAAGTTACCGATATCATAATCCAGTCCTTAACTTGTTCTTCCTTTAATCATGATTAACAAGACATCGAATTGTGATGGTAATCGTTAGGTGCACCGGCCATGACTTCTCGAGGTTTGGTCGAGAAAGACTTCGAACAGATCGCTGAGTTCCTGCACCGTGCTGTAACCATCACCTTGAATGTCCAGAAGGAACATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGTAAACAACAAGGAAATCGAAGCGCTGAAGGCGGACGTCGAGAAATTTTCTGGCTCGTTCGAGATGCCGGGTTTTCTCATGTCTGAGATGAAGTACAAGGACTAGAAAGCAGGCAGACAACAAGATCTTCGGGAAAATTAATAAAGTTTTGGGTGTTGGTTGAATCTTTAAAATCATTTGCTTAAAGTTGAAAAAGTAAAAAAAAAAGATTGCCGTTTGTTTTGTTTGTTTTCCTTCTTTTACCACTTTGTAGACTTAGATTTCCATTCTCAATATATTCATTCCAAGATCTCCATTTTCATATTAATAATCACTATTTTTTATTAGTAATAGGATAATTCTGGGCCACTTTGGCCCATATTCAAACAAGCCGCAAGGCCCGTTTTTTTATAATTCTGGGCCACTGTGGCCCATATTCTTGCTCCTTCGTTTTATTTTGGGCTTTAGGAGGATTATAGGCCCATTGTTTTTGTAGTAGACATGATGCTGCACAACTTCGTTAATTATGCATAATATTAGAATAA

mRNA sequence

CTCACAAATCCCCTCATCTGAAAATTGTCTTGCCCCCATTTTTCATCTTCTTCTTCTTCTTCTTCTACTACTCAAATTTCTCTGTAATTTCTCTTTTCTCGCCATGGATCCCGTCAATGCTTGGGGCAATACTCCTCTCGTAAACGTTGACCCTGAGATCTTCGATTTGATCGAGAAGGAGAAGCGTCGCCAATGCCGCGGAATCGAGCTCATTGCTTCTGAAAATTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGAAGTTCCCTGACCAACAAGTACTCCGAGGGCATGCCGGGGAACCGATACTACGGTGGAAACGAGTTCATCGATGAGATCGAGAATCTCTGCCGTTCTCGAGCTCTCCAAGCTTTCCATGTCGATCCAGCCAAATGGGGCGTTAATGTCCAGCCCTACTCTGGTTCTCCGGCGAATTTCGCCGCCTACACCGCGTTGCTTCAGCCGCATGATCGGATTATGGGGCTGGATCTTCCTTCTGGTGGTCATTTGACGCATGGTTACTACACCTCTGGAGGGAAGAAGATCTCCGCTACCTCGATTTACTTCGAGAGTTTGCCTTACAAGGTTGATTCCGCCACTGGATTTATTGATTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATTATCTGTGGTGGCAGTGCGTACCCGAGGGACTGGGATTATGCCAGATTCAGGGCAATTGCTGATAAATGCGGTGCCCTTCTGCTCTGTGATATGGCTCACATTAGTGGTCTCGTTGCTGCTCAGGAAGCTGCGAACCCGTTCGAGTACTGTGACGTCGTGACGACCACGACTCACAAGAGTTTGAGGGGTCCTAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCGCCTAAGAAGGGTCAGCCTGAGGATGCTGTCTATGACTTCGAAGACAAGATCAACTTCTCTGTGTTCCCAGCCCTTCAGGGTGGCCCTCACAATCATCAAATTGGCGCTTTAGCTGTTGCCTTGAAGCAGGCTATGTCCCCTGGGTTCAAGGTCTATGCGAAACAAGTTAAGGCCAATGCCGTGGCCCTTGGAAATTACCTGATGAACAAGGGCTACAAGCTTGTCACCGGAGGAACCGAGAATCATCTCGTTCTCTGGGATCTTCGTCCTTTGGGATTGACCGGCAACAAGGTCGAGAAGCTTTGCGACTTGTGCAACATCACTGTAAACAAAAACGCAGTGTTTGGCGACAGCAGCGCATTGGCTCCCGGAGGTGTTAGAATTGGTGCACCGGCCATGACTTCTCGAGGTTTGGTCGAGAAAGACTTCGAACAGATCGCTGAGTTCCTGCACCGTGCTGTAACCATCACCTTGAATGTCCAGAAGGAACATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGTAAACAACAAGGAAATCGAAGCGCTGAAGGCGGACGTCGAGAAATTTTCTGGCTCGTTCGAGATGCCGGGTTTTCTCATGTCTGAGATGAAGTACAAGGACTAGAAAGCAGGCAGACAACAAGATCTTCGGGAAAATTAATAAAGTTTTGGGTGTTGGTTGAATCTTTAAAATCATTTGCTTAAAGTTGAAAAAGTAAAAAAAAAAGATTGCCGTTTGTTTTGTTTGTTTTCCTTCTTTTACCACTTTGTAGACTTAGATTTCCATTCTCAATATATTCATTCCAAGATCTCCATTTTCATATTAATAATCACTATTTTTTATTAGTAATAGGATAATTCTGGGCCACTTTGGCCCATATTCAAACAAGCCGCAAGGCCCGTTTTTTTATAATTCTGGGCCACTGTGGCCCATATTCTTGCTCCTTCGTTTTATTTTGGGCTTTAGGAGGATTATAGGCCCATTGTTTTTGTAGTAGACATGATGCTGCACAACTTCGTTAATTATGCATAATATTAGAATAA

Coding sequence (CDS)

ATGGATCCCGTCAATGCTTGGGGCAATACTCCTCTCGTAAACGTTGACCCTGAGATCTTCGATTTGATCGAGAAGGAGAAGCGTCGCCAATGCCGCGGAATCGAGCTCATTGCTTCTGAAAATTTCACCTCCTTCGCCGTCATCGAGGCCCTCGGAAGTTCCCTGACCAACAAGTACTCCGAGGGCATGCCGGGGAACCGATACTACGGTGGAAACGAGTTCATCGATGAGATCGAGAATCTCTGCCGTTCTCGAGCTCTCCAAGCTTTCCATGTCGATCCAGCCAAATGGGGCGTTAATGTCCAGCCCTACTCTGGTTCTCCGGCGAATTTCGCCGCCTACACCGCGTTGCTTCAGCCGCATGATCGGATTATGGGGCTGGATCTTCCTTCTGGTGGTCATTTGACGCATGGTTACTACACCTCTGGAGGGAAGAAGATCTCCGCTACCTCGATTTACTTCGAGAGTTTGCCTTACAAGGTTGATTCCGCCACTGGATTTATTGATTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATTATCTGTGGTGGCAGTGCGTACCCGAGGGACTGGGATTATGCCAGATTCAGGGCAATTGCTGATAAATGCGGTGCCCTTCTGCTCTGTGATATGGCTCACATTAGTGGTCTCGTTGCTGCTCAGGAAGCTGCGAACCCGTTCGAGTACTGTGACGTCGTGACGACCACGACTCACAAGAGTTTGAGGGGTCCTAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCGCCTAAGAAGGGTCAGCCTGAGGATGCTGTCTATGACTTCGAAGACAAGATCAACTTCTCTGTGTTCCCAGCCCTTCAGGGTGGCCCTCACAATCATCAAATTGGCGCTTTAGCTGTTGCCTTGAAGCAGGCTATGTCCCCTGGGTTCAAGGTCTATGCGAAACAAGTTAAGGCCAATGCCGTGGCCCTTGGAAATTACCTGATGAACAAGGGCTACAAGCTTGTCACCGGAGGAACCGAGAATCATCTCGTTCTCTGGGATCTTCGTCCTTTGGGATTGACCGGCAACAAGGTCGAGAAGCTTTGCGACTTGTGCAACATCACTGTAAACAAAAACGCAGTGTTTGGCGACAGCAGCGCATTGGCTCCCGGAGGTGTTAGAATTGGTGCACCGGCCATGACTTCTCGAGGTTTGGTCGAGAAAGACTTCGAACAGATCGCTGAGTTCCTGCACCGTGCTGTAACCATCACCTTGAATGTCCAGAAGGAACATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGTAAACAACAAGGAAATCGAAGCGCTGAAGGCGGACGTCGAGAAATTTTCTGGCTCGTTCGAGATGCCGGGTTTTCTCATGTCTGAGATGAAGTACAAGGACTAG

Protein sequence

MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD

Homology

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BLAST of CmaCh17G000880 vs. Swiss-Prot
Match: GLYC4_ARATH (Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 5.6e-261
Identity = 431/471 (91.51%), Postives = 456/471 (96.82%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PV++WGNT LV+VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EG+PGNRYYGGNEFIDEIENLCRSRAL+AFH DPA WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDYARFRAIADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE AVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA +PGFKVYAKQVKANAVALGNYLM+KGY++VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLC+IT+NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFL RAVT+TL
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           ++QK +GKLLKDFNKGLVNNK+++ LKADVEKFS S+EMPGFLMSEMKYKD
Sbjct: 421 DIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. Swiss-Prot
Match: GLYC5_ARATH (Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana GN=SHM5 PE=3 SV=1)

HSP 1 Score: 811.6 bits (2095), Expect = 4.5e-234
Identity = 381/468 (81.41%), Postives = 430/468 (91.88%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PV +WGNT L  VDPEI+DLIEKEK RQCRGIELIA+ENFTS AV+EALGS LTNKYS
Sbjct: 1   MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGG EFIDEIE+LCRSR+L+AFH +P KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGH+THGYY+SGGK ISATSIYFE+LPYKVDS TG+IDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGG++YPR+WDYARFRA+ADK GA LLCDMAH S LVAAQEAA+PFEYCDVVTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           +THKSLRGPRAGMIFYRKGPKP KKGQPE  VYDF+ KIN +VFPALQ GPHN++IGALA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQ M+P FKVYAKQVKANA  L +YL+NKGY LVT GT+NHL+LWDLRPLGLTGNKV
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EK+C+LC IT+N+NAVFGD+S LAPGGVRIG PAMTSRGLVEKDFE+I EFLHRAVTITL
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMK 469
           ++Q+++GK++KDFNKGLVNNKEI+ +KADVE+F+  F+MPGF +SE +
Sbjct: 421 DIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESR 468

[Close]

BLAST of CmaCh17G000880 vs. Swiss-Prot
Match: GLYC7_ARATH (Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana GN=SHM7 PE=2 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 4.1e-179
Identity = 295/466 (63.30%), Postives = 368/466 (78.97%), Query Frame = 1


Query: 4   VNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGM 63
           V AWG+ P+   DP+I +L+EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 130 VRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGM 189

Query: 64  PGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IENLC  RAL AF ++  KWGVNVQPYS + ANFA YT LL P +R
Sbjct: 190 PGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGER 249

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGY T GGKKISA SI+FES PYKV+  TG+IDYDKLE+KALD+RPK
Sbjct: 250 IMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPK 309

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDWD+AR R IADKCGA+L+CDMAHISGLVA +E +NPF++CD+VT+TTH
Sbjct: 310 ILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTH 369

Query: 244 KSLRGPRAGMIFYRKGPKPPKKGQ-----PEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           K LRGPR G+IFYR+GPK  K+G           YD E+KINF+VFP+LQGGPHN+ I A
Sbjct: 370 KGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIAA 429

Query: 304 LAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQ  +P +K Y +Q+K NA AL   L+ +  +LVTGGT+NHL+LWDL P+GLTG 
Sbjct: 430 LAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGK 489

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTI 423
             EK+C++C+IT+NK A+FGD+  ++PGGVRIG PAMT+RG +E DFE +A+FL +A  I
Sbjct: 490 VYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQI 549

Query: 424 TLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLM 465
           T  +Q+EHGK  K+F K L  NK+I  L+  VE F+  +EMP  L+
Sbjct: 550 TSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPASLI 595

[Close]

BLAST of CmaCh17G000880 vs. Swiss-Prot
Match: GLYC6_ARATH (Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana GN=SHM6 PE=2 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 1.6e-178
Identity = 297/466 (63.73%), Postives = 369/466 (79.18%), Query Frame = 1


Query: 4   VNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGM 63
           V AWGN  +   DPEI + +EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGM 193

Query: 64  PGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IE LC+ RAL AF ++  KWGVNVQPYS + ANFA +T LL P +R
Sbjct: 194 PGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGER 253

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGYYT GGKK+S  SI+FES PYKVD  TG+IDYDKLEEKALD+RPK
Sbjct: 254 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPK 313

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDW++ RFR IADKCGA+L+ DMA ISGLVAA+E+ NPF+YCD+VT+TTH
Sbjct: 314 ILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTH 373

Query: 244 KSLRGPRAGMIFYRKGPKPPKKG-----QPEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           KSLRGPR G+IFY++G KP K+         +  YDFE+KINFSVFP+LQGGPHN+ I A
Sbjct: 374 KSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAA 433

Query: 304 LAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQA SP +K+Y +QVK NA AL + L+++  KL+TGGT+NHL+LWDL PLGLTG 
Sbjct: 434 LAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGK 493

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTI 423
             EK+C++C+ITVNK A+F ++  ++PGGVRIG+PAMTSRG +E +FE +A+FL+RA  I
Sbjct: 494 VYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQI 553

Query: 424 TLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLM 465
               Q+EHGKL K+  K + + KEI  L+  VE F+  F MP F M
Sbjct: 554 ASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM 599

[Close]

BLAST of CmaCh17G000880 vs. Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.4e-174
Identity = 301/454 (66.30%), Postives = 363/454 (79.96%), Query Frame = 1


Query: 8   GNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGMPGNR 67
           GNTPL  VD EIF+L+ +EK RQ +G+ELIASENFTS AV+EALGS  TNKY+EG PG+R
Sbjct: 6   GNTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSR 65

Query: 68  YYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGL 127
           YYGG E +DE+E LC+ RAL+AF +D +KWGVNVQPYSGSPANFA YTALL+PHDRIMGL
Sbjct: 66  YYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGL 125

Query: 128 DLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPKLIIC 187
           DLPSGGHLTHGY T   KKISA+SI+FES+PY++  A G IDY +LEE AL F+PKLII 
Sbjct: 126 DLPSGGHLTHGYQTDK-KKISASSIFFESMPYQI-GADGLIDYQRLEENALLFKPKLIIS 185

Query: 188 GGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLR 247
           G SAYPR+WDY R RAIADK GA L+CDMAH SGLVAAQ   +PF+YCDVVT+TTHK+LR
Sbjct: 186 GASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLR 245

Query: 248 GPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAM 307
           GPR+G+IF+R+G +    G+ E   YD E KINF+VFP+LQGGPH + I  +AVALK+A 
Sbjct: 246 GPRSGIIFFRRGKRVDGNGK-EIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEAD 305

Query: 308 SPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLC 367
           S  FK YA QVK NA A+GN LMNKGYKLVT GT+NHL+LWDLRP  LTGNK EK  D+ 
Sbjct: 306 SQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIA 365

Query: 368 NITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITLNVQKEHG 427
           NITVNKNAV GD++A++PGG+RIG+ A+TSRGL E DFE+IA+FL R V+I+L +Q   G
Sbjct: 366 NITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGRVG 425

Query: 428 KLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPG 462
           K L DF   +  +KE+  L+ +VE+FS  F +PG
Sbjct: 426 KKLVDFVVEINKSKELLDLRKEVEEFSSKFTLPG 456

[Close]

BLAST of CmaCh17G000880 vs. TrEMBL
Match: A0A0A0LKC8_CUCSA (Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_2G145880 PE=3 SV=1)

HSP 1 Score: 950.7 bits (2456), Expect = 6.9e-274
Identity = 459/471 (97.45%), Postives = 465/471 (98.73%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVN WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHCDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           NVQKE+GKLLKDFNKGLVNNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NVQKEYGKLLKDFNKGLVNNKEIEKLKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. TrEMBL
Match: A0A061ES58_THECC (Serine hydroxymethyltransferase OS=Theobroma cacao GN=TCM_020228 PE=3 SV=1)

HSP 1 Score: 922.2 bits (2382), Expect = 2.6e-265
Identity = 438/471 (92.99%), Postives = 461/471 (97.88%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVNAWGN+ L +VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNAWGNSSLESVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCR+RALQAFH+DP KWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRARALQAFHLDPTKWGVNVQPYSGSPANFAAYTAILQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S+TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRA+ADKCGALLLCDMAHISGLVAAQEAANPFE+CD+VTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEFCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLM+KGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMSKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG PAMTSRGL+EKDFEQI EFLH+AVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHQAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           N+QK++GKLLKDFNKGLVNNKEIE LKADVEKF+ SF+MPGF MSEMKYKD
Sbjct: 421 NIQKQYGKLLKDFNKGLVNNKEIEELKADVEKFASSFDMPGFKMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. TrEMBL
Match: M5XDY2_PRUPE (Serine hydroxymethyltransferase OS=Prunus persica GN=PRUPE_ppa005242mg PE=3 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 2.9e-264
Identity = 437/471 (92.78%), Postives = 458/471 (97.24%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PVN WGN+PLV VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MEPVNDWGNSPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH+D AKWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHLDAAKWGVNVQPYSGSPANFAAYTAVLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RP+LIICGGSAYPRDWDYARFR++ADKCGALLLCDMAHISGLVAAQEAANPFEYCD+VTT
Sbjct: 181 RPRLIICGGSAYPRDWDYARFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDA YDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAAYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVALGNYL++K Y LVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLISKDYNLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSAL+PGGVRIGAPAMTSRGLVEKDFE+I EFLHRAV++TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALSPGGVRIGAPAMTSRGLVEKDFEKIGEFLHRAVSLTL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
            +QKEHGKLLKDFNKGLVNNK+IE LKADVEKFS SFEMPGF+MSEMKYKD
Sbjct: 421 KIQKEHGKLLKDFNKGLVNNKDIEELKADVEKFSASFEMPGFVMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. TrEMBL
Match: A0A067KWI2_JATCU (Serine hydroxymethyltransferase OS=Jatropha curcas GN=JCGZ_01085 PE=3 SV=1)

HSP 1 Score: 916.8 bits (2368), Expect = 1.1e-263
Identity = 437/471 (92.78%), Postives = 458/471 (97.24%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPV+ WGN+ L  VDP+I DLIEKEKRRQC GIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVSVWGNSSLQTVDPDIHDLIEKEKRRQCSGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH+DP KWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHLDPTKWGVNVQPYSGSPANFAAYTAVLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQTGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYA+F+++ADKCGALLLCDMAHISGLVAAQEAANPFEYCD+VTT
Sbjct: 181 RPKLIICGGSAYPRDWDYAKFKSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA +PGFKVYAKQVKANAVALGNYLM++GYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQATTPGFKVYAKQVKANAVALGNYLMSQGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG PAMTSRGLVEKDFEQI EFLHRAVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEQIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
            +QKEHGKLLKDFNKGLVNNK+IEALKADVEKF+ SF+MPGFL+SEMKYKD
Sbjct: 421 KIQKEHGKLLKDFNKGLVNNKDIEALKADVEKFALSFDMPGFLVSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. TrEMBL
Match: A9PCX3_POPTR (Serine hydroxymethyltransferase OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 916.0 bits (2366), Expect = 1.9e-263
Identity = 437/471 (92.78%), Postives = 456/471 (96.82%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPV  WGN+ L  VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVTVWGNSSLQTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNE+IDEIENLCR+RALQAFH+DP KWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEYIDEIENLCRARALQAFHLDPTKWGVNVQPYSGSPANFAAYTAVLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TGF+DYD+LEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNPQTGFLDYDRLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY +FR++ADKCGALLLCDMAHISGLVAAQEAANPFEYCD+VTT
Sbjct: 181 RPKLIICGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA SPGFK YAKQVKANAVALGNYLM+KGYKLVT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAQSPGFKAYAKQVKANAVALGNYLMSKGYKLVTEGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDL NITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFLHRAVTITL
Sbjct: 361 EKLCDLANITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           ++QKEHGKLLKDFNKGLVNNKEIEALKADVE+FSGSFEMPGFLMSEMKYKD
Sbjct: 421 SIQKEHGKLLKDFNKGLVNNKEIEALKADVEQFSGSFEMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. TAIR10
Match: AT4G13930.1 (AT4G13930.1 serine hydroxymethyltransferase 4)

HSP 1 Score: 901.0 bits (2327), Expect = 3.2e-262
Identity = 431/471 (91.51%), Postives = 456/471 (96.82%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PV++WGNT LV+VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EG+PGNRYYGGNEFIDEIENLCRSRAL+AFH DPA WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDYARFRAIADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE AVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA +PGFKVYAKQVKANAVALGNYLM+KGY++VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLC+IT+NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFL RAVT+TL
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           ++QK +GKLLKDFNKGLVNNK+++ LKADVEKFS S+EMPGFLMSEMKYKD
Sbjct: 421 DIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. TAIR10
Match: AT4G13890.1 (AT4G13890.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein)

HSP 1 Score: 811.6 bits (2095), Expect = 2.5e-235
Identity = 381/468 (81.41%), Postives = 430/468 (91.88%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PV +WGNT L  VDPEI+DLIEKEK RQCRGIELIA+ENFTS AV+EALGS LTNKYS
Sbjct: 1   MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGG EFIDEIE+LCRSR+L+AFH +P KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGH+THGYY+SGGK ISATSIYFE+LPYKVDS TG+IDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGG++YPR+WDYARFRA+ADK GA LLCDMAH S LVAAQEAA+PFEYCDVVTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           +THKSLRGPRAGMIFYRKGPKP KKGQPE  VYDF+ KIN +VFPALQ GPHN++IGALA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQ M+P FKVYAKQVKANA  L +YL+NKGY LVT GT+NHL+LWDLRPLGLTGNKV
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EK+C+LC IT+N+NAVFGD+S LAPGGVRIG PAMTSRGLVEKDFE+I EFLHRAVTITL
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMK 469
           ++Q+++GK++KDFNKGLVNNKEI+ +KADVE+F+  F+MPGF +SE +
Sbjct: 421 DIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESR 468

[Close]

BLAST of CmaCh17G000880 vs. TAIR10
Match: AT1G36370.1 (AT1G36370.1 serine hydroxymethyltransferase 7)

HSP 1 Score: 629.0 bits (1621), Expect = 2.3e-180
Identity = 295/466 (63.30%), Postives = 368/466 (78.97%), Query Frame = 1


Query: 4   VNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGM 63
           V AWG+ P+   DP+I +L+EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 130 VRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGM 189

Query: 64  PGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IENLC  RAL AF ++  KWGVNVQPYS + ANFA YT LL P +R
Sbjct: 190 PGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGER 249

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGY T GGKKISA SI+FES PYKV+  TG+IDYDKLE+KALD+RPK
Sbjct: 250 IMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPK 309

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDWD+AR R IADKCGA+L+CDMAHISGLVA +E +NPF++CD+VT+TTH
Sbjct: 310 ILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTH 369

Query: 244 KSLRGPRAGMIFYRKGPKPPKKGQ-----PEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           K LRGPR G+IFYR+GPK  K+G           YD E+KINF+VFP+LQGGPHN+ I A
Sbjct: 370 KGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIAA 429

Query: 304 LAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQ  +P +K Y +Q+K NA AL   L+ +  +LVTGGT+NHL+LWDL P+GLTG 
Sbjct: 430 LAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGK 489

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTI 423
             EK+C++C+IT+NK A+FGD+  ++PGGVRIG PAMT+RG +E DFE +A+FL +A  I
Sbjct: 490 VYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQI 549

Query: 424 TLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLM 465
           T  +Q+EHGK  K+F K L  NK+I  L+  VE F+  +EMP  L+
Sbjct: 550 TSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPASLI 595

[Close]

BLAST of CmaCh17G000880 vs. TAIR10
Match: AT1G22020.1 (AT1G22020.1 serine hydroxymethyltransferase 6)

HSP 1 Score: 627.1 bits (1616), Expect = 8.8e-180
Identity = 297/466 (63.73%), Postives = 369/466 (79.18%), Query Frame = 1


Query: 4   VNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGM 63
           V AWGN  +   DPEI + +EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGM 193

Query: 64  PGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++ID+IE LC+ RAL AF ++  KWGVNVQPYS + ANFA +T LL P +R
Sbjct: 194 PGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGER 253

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGYYT GGKK+S  SI+FES PYKVD  TG+IDYDKLEEKALD+RPK
Sbjct: 254 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPK 313

Query: 184 LIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDW++ RFR IADKCGA+L+ DMA ISGLVAA+E+ NPF+YCD+VT+TTH
Sbjct: 314 ILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTH 373

Query: 244 KSLRGPRAGMIFYRKGPKPPKKG-----QPEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           KSLRGPR G+IFY++G KP K+         +  YDFE+KINFSVFP+LQGGPHN+ I A
Sbjct: 374 KSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAA 433

Query: 304 LAVALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQA SP +K+Y +QVK NA AL + L+++  KL+TGGT+NHL+LWDL PLGLTG 
Sbjct: 434 LAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGK 493

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTI 423
             EK+C++C+ITVNK A+F ++  ++PGGVRIG+PAMTSRG +E +FE +A+FL+RA  I
Sbjct: 494 VYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQI 553

Query: 424 TLNVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLM 465
               Q+EHGKL K+  K + + KEI  L+  VE F+  F MP F M
Sbjct: 554 ASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM 599

[Close]

BLAST of CmaCh17G000880 vs. TAIR10
Match: AT4G32520.1 (AT4G32520.1 serine hydroxymethyltransferase 3)

HSP 1 Score: 560.1 bits (1442), Expect = 1.3e-159
Identity = 277/456 (60.75%), Postives = 341/456 (74.78%), Query Frame = 1


Query: 12  LVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYSEGMPGNRYYGG 71
           L  VDPE+  +I KEK RQ R +ELIASENFTS AV+EA+GS LTNKYSEG+PG RYYGG
Sbjct: 83  LGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142

Query: 72  NEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPS 131
           NE+ID++E LC++RAL AF +D  KWGVNVQP SGSPANFA YTA+L PHDRIMGLDLP 
Sbjct: 143 NEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHDRIMGLDLPH 202

Query: 132 GGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDFRPKLIICGGSA 191
           GGHL+HG+ T+  +++S TSIYFES+PY++D +TG +DYD LE+ A  FRPKLII G SA
Sbjct: 203 GGHLSHGFMTA-KRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKLIIAGASA 262

Query: 192 YPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRA 251
           Y RD+DY R R IAD  GA L+ DMAHISGLVAA   A+PFEYCD+VTTTTHKSLRGPR 
Sbjct: 263 YSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRG 322

Query: 252 GMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAMSPGF 311
           GMIF+RK P             D E  +N +VFP LQGGPHNH IG LAV LK A SP F
Sbjct: 323 GMIFFRKDPING---------VDLESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 382

Query: 312 KVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITV 371
           K Y K+V +N  AL N L+  G+KLV+GG++NHLVL DLRP+G+ G +VEK+ D+ +IT+
Sbjct: 383 KAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITL 442

Query: 372 NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITLNVQK-EHGKLL 431
           NKN+V GD SAL PGG+RIG+PAMT+RGL EKDF  +A+F+   V IT+  +K   G  L
Sbjct: 443 NKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKL 502

Query: 432 KDFNKGLVN-----NKEIEALKADVEKFSGSFEMPG 462
           +DFNK + +      + +++LK  VE F+  F +PG
Sbjct: 503 QDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPG 528

[Close]

BLAST of CmaCh17G000880 vs. NCBI nr
Match: gi|449442395|ref|XP_004138967.1| (PREDICTED: serine hydroxymethyltransferase 4 [Cucumis sativus])

HSP 1 Score: 950.7 bits (2456), Expect = 9.9e-274
Identity = 459/471 (97.45%), Postives = 465/471 (98.73%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVN WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHCDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           NVQKE+GKLLKDFNKGLVNNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NVQKEYGKLLKDFNKGLVNNKEIEKLKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. NCBI nr
Match: gi|659114777|ref|XP_008457222.1| (PREDICTED: serine hydroxymethyltransferase 4 [Cucumis melo])

HSP 1 Score: 945.3 bits (2442), Expect = 4.1e-272
Identity = 456/471 (96.82%), Postives = 462/471 (98.09%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVN WGNTPL  VDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAF  DP KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFRCDPTKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           N+QKE+GKLLKDFNKGLVNNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. NCBI nr
Match: gi|590656253|ref|XP_007034218.1| (Serine hydroxymethyltransferase 4 isoform 1 [Theobroma cacao])

HSP 1 Score: 922.2 bits (2382), Expect = 3.8e-265
Identity = 438/471 (92.99%), Postives = 461/471 (97.88%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MDPVNAWGN+ L +VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNAWGNSSLESVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCR+RALQAFH+DP KWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRARALQAFHLDPTKWGVNVQPYSGSPANFAAYTAILQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S+TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDYARFRA+ADKCGALLLCDMAHISGLVAAQEAANPFE+CD+VTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEFCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLM+KGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMSKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG PAMTSRGL+EKDFEQI EFLH+AVTITL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHQAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           N+QK++GKLLKDFNKGLVNNKEIE LKADVEKF+ SF+MPGF MSEMKYKD
Sbjct: 421 NIQKQYGKLLKDFNKGLVNNKEIEELKADVEKFASSFDMPGFKMSEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. NCBI nr
Match: gi|729472659|ref|XP_010527458.1| (PREDICTED: serine hydroxymethyltransferase 4 [Tarenaya hassleriana])

HSP 1 Score: 919.8 bits (2376), Expect = 1.9e-264
Identity = 442/471 (93.84%), Postives = 457/471 (97.03%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           MD V++WGNTPLV VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDSVSSWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH+DP+KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHLDPSKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TG+IDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDYAR RAIADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARLRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVAL NYLM+KGY +VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALANYLMSKGYSIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNIT+NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFLHRAVTITL
Sbjct: 361 EKLCDLCNITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLHRAVTITL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
           NVQKE GKLLKDFNKGLVNNKEIE LKADVEKFSGS+EMPGFLM+EMKYKD
Sbjct: 421 NVQKEFGKLLKDFNKGLVNNKEIEELKADVEKFSGSYEMPGFLMAEMKYKD 471

[Close]

BLAST of CmaCh17G000880 vs. NCBI nr
Match: gi|596161140|ref|XP_007222930.1| (hypothetical protein PRUPE_ppa005242mg [Prunus persica])

HSP 1 Score: 918.7 bits (2373), Expect = 4.2e-264
Identity = 437/471 (92.78%), Postives = 458/471 (97.24%), Query Frame = 1


Query: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60
           M+PVN WGN+PLV VDPEI DLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MEPVNDWGNSPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFIDEIENLCRSRALQAFH+D AKWGVNVQPYSGSPANFAAYTA+LQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHLDAAKWGVNVQPYSGSPANFAAYTAVLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+S TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RP+LIICGGSAYPRDWDYARFR++ADKCGALLLCDMAHISGLVAAQEAANPFEYCD+VTT
Sbjct: 181 RPRLIICGGSAYPRDWDYARFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDA YDFEDKINF+VFP+LQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAAYDFEDKINFAVFPSLQGGPHNHQIGALA 300

Query: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAMSPGFK YAKQVKANAVALGNYL++K Y LVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLISKDYNLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420
           EKLCDLCNITVNKNAVFGDSSAL+PGGVRIGAPAMTSRGLVEKDFE+I EFLHRAV++TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALSPGGVRIGAPAMTSRGLVEKDFEKIGEFLHRAVSLTL 420

Query: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 472
            +QKEHGKLLKDFNKGLVNNK+IE LKADVEKFS SFEMPGF+MSEMKYKD
Sbjct: 421 KIQKEHGKLLKDFNKGLVNNKDIEELKADVEKFSASFEMPGFVMSEMKYKD 471

The following BLAST results are available for this feature:

BLAST of CmaCh17G000880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GLYC4_ARATH	5.6e-261	91.51	Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1	[more]
GLYC5_ARATH	4.5e-234	81.41	Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana GN=SHM5 PE=3 SV=1	[more]
GLYC7_ARATH	4.1e-179	63.30	Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana GN=SHM7 PE=2 SV=1	[more]
GLYC6_ARATH	1.6e-178	63.73	Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana GN=SHM6 PE=2 SV=1	[more]
GLYC1_DICDI	1.4e-174	66.30	Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1	[more]

BLAST of CmaCh17G000880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKC8_CUCSA	6.9e-274	97.45	Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_2G145880 PE=3 SV=1	[more]
A0A061ES58_THECC	2.6e-265	92.99	Serine hydroxymethyltransferase OS=Theobroma cacao GN=TCM_020228 PE=3 SV=1	[more]
M5XDY2_PRUPE	2.9e-264	92.78	Serine hydroxymethyltransferase OS=Prunus persica GN=PRUPE_ppa005242mg PE=3 SV=1	[more]
A0A067KWI2_JATCU	1.1e-263	92.78	Serine hydroxymethyltransferase OS=Jatropha curcas GN=JCGZ_01085 PE=3 SV=1	[more]
A9PCX3_POPTR	1.9e-263	92.78	Serine hydroxymethyltransferase OS=Populus trichocarpa PE=2 SV=1	[more]

BLAST of CmaCh17G000880 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13930.1	3.2e-262	91.51	serine hydroxymethyltransferase 4	[more]
AT4G13890.1	2.5e-235	81.41	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein	[more]
AT1G36370.1	2.3e-180	63.30	serine hydroxymethyltransferase 7	[more]
AT1G22020.1	8.8e-180	63.73	serine hydroxymethyltransferase 6	[more]
AT4G32520.1	1.3e-159	60.75	serine hydroxymethyltransferase 3	[more]

BLAST of CmaCh17G000880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442395\|ref\|XP_004138967.1\|	9.9e-274	97.45	PREDICTED: serine hydroxymethyltransferase 4 [Cucumis sativus]	[more]
gi\|659114777\|ref\|XP_008457222.1\|	4.1e-272	96.82	PREDICTED: serine hydroxymethyltransferase 4 [Cucumis melo]	[more]
gi\|590656253\|ref\|XP_007034218.1\|	3.8e-265	92.99	Serine hydroxymethyltransferase 4 isoform 1 [Theobroma cacao]	[more]
gi\|729472659\|ref\|XP_010527458.1\|	1.9e-264	93.84	PREDICTED: serine hydroxymethyltransferase 4 [Tarenaya hassleriana]	[more]
gi\|596161140\|ref\|XP_007222930.1\|	4.2e-264	92.78	hypothetical protein PRUPE_ppa005242mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001085	Ser_HO-MeTrfase
IPR015421	PyrdxlP-dep_Trfase_major
IPR015422	PyrdxlP-dep_Trfase_dom1
IPR015424	PyrdxlP-dep_Trfase
IPR019798	Ser_HO-MeTrfase_PLP_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity
GO:0003824	catalytic activity
GO:0004372	glycine hydroxymethyltransferase activity
GO:0030170	pyridoxal phosphate binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006544	glycine metabolic process
GO:0006563	L-serine metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0032259	methylation
biological_process	GO:0035999	tetrahydrofolate interconversion
biological_process	GO:0019264	glycine biosynthetic process from serine
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004372	glycine hydroxymethyltransferase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G000880.1	CmaCh17G000880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001085	Serine hydroxymethyltransferase	HAMAP	MF_00051	SHMT	coord: 11..461 score: 42
IPR001085	Serine hydroxymethyltransferase	PIR	PIRSF000412	SHMT	coord: 1..466 score: 1.1E
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 1..467 score:
IPR001085	Serine hydroxymethyltransferase	PFAM	PF00464	SHMT	coord: 13..411 score: 7.1E
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	GENE3D	G3DSA:3.40.640.10		coord: 41..312 score: 1.8
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GENE3D	G3DSA:3.90.1150.10		coord: 313..463 score: 3.7
IPR015424	Pyridoxal phosphate-dependent transferase	unknown	SSF53383	PLP-dependent transferases	coord: 4..463 score: 1.01E
IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	PROSITE	PS00096	SHMT	coord: 236..252 scor
None	No IPR available	PANTHER	PTHR11680:SF11	SUBFAMILY NOT NAMED	coord: 1..467 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G000880	Cucsa.194040	Cucumber (Gy14) v1	cgycmaB0565
CmaCh17G000880	Cla010549	Watermelon (97103) v1	cmawmB358
CmaCh17G000880	Csa2G145880	Cucumber (Chinese Long) v2	cmacuB354
CmaCh17G000880	MELO3C020429	Melon (DHL92) v3.5.1	cmameB338
CmaCh17G000880	ClCG06G007960	Watermelon (Charleston Gray)	cmawcgB328
CmaCh17G000880	CSPI02G09300	Wild cucumber (PI 183967)	cmacpiB358
CmaCh17G000880	CmoCh08G009670	Cucurbita moschata (Rifu)	cmacmoB379
CmaCh17G000880	CmoCh17G000940	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G000880	Lsi09G011280	Bottle gourd (USVL1VR-Ls)	cmalsiB331
CmaCh17G000880	MELO3C020429.2	Melon (DHL92) v3.6.1	cmamedB394
CmaCh17G000880	CsaV3_2G011710	Cucumber (Chinese Long) v3	cmacucB0424
CmaCh17G000880	Cla97C06G117660	Watermelon (97103) v2	cmawmbB377
CmaCh17G000880	Bhi12G001286	Wax gourd	cmawgoB0455
CmaCh17G000880	CsGy2G009510	Cucumber (Gy14) v2	cgybcmaB197
CmaCh17G000880	Carg11050	Silver-seed gourd	carcmaB1486
CmaCh17G000880	Carg10149	Silver-seed gourd	carcmaB0314

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G000880	CmaCh08G009940	Cucurbita maxima (Rimu)	cmacmaB387

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G000880	Cucumber (Chinese Long) v3	cmacucB0425
CmaCh17G000880	Watermelon (97103) v2	cmawmbB366
CmaCh17G000880	Wax gourd	cmawgoB0475
CmaCh17G000880	Cucurbita maxima (Rimu)	cmacmaB249
CmaCh17G000880	Cucurbita maxima (Rimu)	cmacmaB373
CmaCh17G000880	Cucumber (Gy14) v1	cgycmaB0715
CmaCh17G000880	Cucumber (Gy14) v1	cgycmaB0743
CmaCh17G000880	Cucurbita moschata (Rifu)	cmacmoB350
CmaCh17G000880	Cucurbita moschata (Rifu)	cmacmoB362
CmaCh17G000880	Cucurbita moschata (Rifu)	cmacmoB365
CmaCh17G000880	Wild cucumber (PI 183967)	cmacpiB355
CmaCh17G000880	Wild cucumber (PI 183967)	cmacpiB361
CmaCh17G000880	Cucumber (Chinese Long) v2	cmacuB357
CmaCh17G000880	Melon (DHL92) v3.5.1	cmameB343
CmaCh17G000880	Watermelon (Charleston Gray)	cmawcgB319
CmaCh17G000880	Watermelon (97103) v1	cmawmB344
CmaCh17G000880	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G000880	Cucurbita pepo (Zucchini)	cmacpeB402
CmaCh17G000880	Cucurbita pepo (Zucchini)	cmacpeB411
CmaCh17G000880	Bottle gourd (USVL1VR-Ls)	cmalsiB356
CmaCh17G000880	Cucumber (Gy14) v2	cgybcmaB194
CmaCh17G000880	Cucumber (Gy14) v2	cgybcmaB345
CmaCh17G000880	Melon (DHL92) v3.6.1	cmamedB398
CmaCh17G000880	Silver-seed gourd	carcmaB1321