CmaCh09G006560.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACCGTGGCACTAGAAAGATTTCTGTGATATGGATTCCTTTCTTTTGTCTCTCATTCTTCCTTTTCGGTATGATCGCCACGAACAGGTTTCTATTTTCTCATTTCGATTTGTTGTGATTCTCTGTTTTTATAGGGTTTTTTTTGTTGATCGGGGGGTTTGGATTTCTGGGTTTTGCAGTAGGTTATGGTTGGTGCCGGAATCTGATGGTCAGGTCATCTCCCGTCGTCGACATGAGCAGGAACTTCAAATCGTCTCTGAAGATAGCTCGATTAAGATGGTGAGTGTTTGACATATTACGACTCATTCTGTTGCCTGTTTAGTCTGATTTATTTTTTCTTGGAAATTTTGAAGCCAGCGGAAAAAAGGGATGTGATCACTGCAGTCTATAGAACTCACGAAGCAATCCAGTTTAGTGCAATTCTTCTTTATTTCCAATTTTTCGTTTCCTCATTCTTCCGCTTTGGCTTAACAGTGAAACAAATTTGTGGAGGTGTACAGATCTTTGGACAAGAAAATTACAATGCTTAA ATGAAGAACCGTGGCACTAGAAAGATTTCTGTGATATGGATTCCTTTCTTTTGTCTCTCATTCTTCCTTTTCGGTATGATCGCCACGAACAGGTTATGGTTGGTGCCGGAATCTGATGGTCAGGTCATCTCCCGTCGTCGACATGAGCAGGAACTTCAAATCGTCTCTGAAGATAGCTCGATTAAGATGCCAGCGGAAAAAAGGGATGTGATCACTGCAGTCTATAGAACTCACGAAGCAATCCAGTTTAGTGCAATTCTTCTTTATTTCCAATTTTTCGTTTCCTCATTCTTCCGCTTTGGCTTAACAGTGAAACAAATTTGTGGAGGTGTACAGATCTTTGGACAAGAAAATTACAATGCTTAA ATGAAGAACCGTGGCACTAGAAAGATTTCTGTGATATGGATTCCTTTCTTTTGTCTCTCATTCTTCCTTTTCGGTATGATCGCCACGAACAGGTTATGGTTGGTGCCGGAATCTGATGGTCAGGTCATCTCCCGTCGTCGACATGAGCAGGAACTTCAAATCGTCTCTGAAGATAGCTCGATTAAGATGCCAGCGGAAAAAAGGGATGTGATCACTGCAGTCTATAGAACTCACGAAGCAATCCAGTTTAGTGCAATTCTTCTTTATTTCCAATTTTTCGTTTCCTCATTCTTCCGCTTTGGCTTAACAGTGAAACAAATTTGTGGAGGTGTACAGATCTTTGGACAAGAAAATTACAATGCTTAA MKNRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDGQVISRRRHEQELQIVSEDSSIKMPAEKRDVITAVYRTHEAIQFSAILLYFQFFVSSFFRFGLTVKQICGGVQIFGQENYNA
BLAST of CmaCh09G006560.1 vs. Swiss-Prot
Match: B3GT7_ARATH (Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. Swiss-Prot
Match: B3GT5_ARATH (Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.8e-07 Identity = 28/82 (34.15%), Postives = 52/82 (63.41%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. TrEMBL
Match: A0A0A0KY94_CUCSA (Hexosyltransferase OS=Cucumis sativus GN=Csa_4G377730 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 7.0e-29 Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. TrEMBL
Match: M5XY44_PRUPE (Hexosyltransferase OS=Prunus persica GN=PRUPE_ppa006755mg PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20 Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. TrEMBL
Match: E0CRD4_VITVI (Hexosyltransferase OS=Vitis vinifera GN=VIT_18s0001g04150 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.5e-18 Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. TrEMBL
Match: A0A061FFP4_THECC (Hexosyltransferase OS=Theobroma cacao GN=TCM_035004 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 9.4e-18 Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. TrEMBL
Match: A0A068VC45_COFCA (Hexosyltransferase OS=Coffea canephora GN=GSCOC_T00001194001 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17 Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. TAIR10
Match: AT1G77810.1 (AT1G77810.1 Galactosyltransferase family protein) HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. TAIR10
Match: AT1G22015.1 (AT1G22015.1 Galactosyltransferase family protein) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08 Identity = 28/82 (34.15%), Postives = 52/82 (63.41%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. NCBI nr
Match: gi|778694510|ref|XP_011653825.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis sativus]) HSP 1 Score: 139.4 bits (350), Expect = 4.1e-30 Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. NCBI nr
Match: gi|659086801|ref|XP_008444117.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis melo]) HSP 1 Score: 139.4 bits (350), Expect = 4.1e-30 Identity = 65/82 (79.27%), Postives = 74/82 (90.24%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. NCBI nr
Match: gi|778694506|ref|XP_011653824.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28 Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. NCBI nr
Match: gi|659086799|ref|XP_008444116.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis melo]) HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28 Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 1
BLAST of CmaCh09G006560.1 vs. NCBI nr
Match: gi|596163873|ref|XP_007222961.1| (hypothetical protein PRUPE_ppa006755mg [Prunus persica]) HSP 1 Score: 106.7 bits (265), Expect = 2.9e-20 Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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