CmaCh09G006560 (gene) Cucurbita maxima (Rimu)

NameCmaCh09G006560
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionBeta-1,3-galactosyltransferase 7
LocationCma_Chr09 : 3120106 .. 3120640 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACCGTGGCACTAGAAAGATTTCTGTGATATGGATTCCTTTCTTTTGTCTCTCATTCTTCCTTTTCGGTATGATCGCCACGAACAGGTTTCTATTTTCTCATTTCGATTTGTTGTGATTCTCTGTTTTTATAGGGTTTTTTTTGTTGATCGGGGGGTTTGGATTTCTGGGTTTTGCAGTAGGTTATGGTTGGTGCCGGAATCTGATGGTCAGGTCATCTCCCGTCGTCGACATGAGCAGGAACTTCAAATCGTCTCTGAAGATAGCTCGATTAAGATGGTGAGTGTTTGACATATTACGACTCATTCTGTTGCCTGTTTAGTCTGATTTATTTTTTCTTGGAAATTTTGAAGCCAGCGGAAAAAAGGGATGTGATCACTGCAGTCTATAGAACTCACGAAGCAATCCAGTTTAGTGCAATTCTTCTTTATTTCCAATTTTTCGTTTCCTCATTCTTCCGCTTTGGCTTAACAGTGAAACAAATTTGTGGAGGTGTACAGATCTTTGGACAAGAAAATTACAATGCTTAA

mRNA sequence

ATGAAGAACCGTGGCACTAGAAAGATTTCTGTGATATGGATTCCTTTCTTTTGTCTCTCATTCTTCCTTTTCGGTATGATCGCCACGAACAGGTTATGGTTGGTGCCGGAATCTGATGGTCAGGTCATCTCCCGTCGTCGACATGAGCAGGAACTTCAAATCGTCTCTGAAGATAGCTCGATTAAGATGCCAGCGGAAAAAAGGGATGTGATCACTGCAGTCTATAGAACTCACGAAGCAATCCAGTTTAGTGCAATTCTTCTTTATTTCCAATTTTTCGTTTCCTCATTCTTCCGCTTTGGCTTAACAGTGAAACAAATTTGTGGAGGTGTACAGATCTTTGGACAAGAAAATTACAATGCTTAA

Coding sequence (CDS)

ATGAAGAACCGTGGCACTAGAAAGATTTCTGTGATATGGATTCCTTTCTTTTGTCTCTCATTCTTCCTTTTCGGTATGATCGCCACGAACAGGTTATGGTTGGTGCCGGAATCTGATGGTCAGGTCATCTCCCGTCGTCGACATGAGCAGGAACTTCAAATCGTCTCTGAAGATAGCTCGATTAAGATGCCAGCGGAAAAAAGGGATGTGATCACTGCAGTCTATAGAACTCACGAAGCAATCCAGTTTAGTGCAATTCTTCTTTATTTCCAATTTTTCGTTTCCTCATTCTTCCGCTTTGGCTTAACAGTGAAACAAATTTGTGGAGGTGTACAGATCTTTGGACAAGAAAATTACAATGCTTAA

Protein sequence

MKNRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDGQVISRRRHEQELQIVSEDSSIKMPAEKRDVITAVYRTHEAIQFSAILLYFQFFVSSFFRFGLTVKQICGGVQIFGQENYNA
BLAST of CmaCh09G006560 vs. Swiss-Prot
Match: B3GT7_ARATH (Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 1

Query: 7  RKISVIWIPFFCLSFFLFGMIATNRLWLVPESD--GQVISRRRHEQELQIVSED-SSIKM 66
          R IS+ W+PF C+SFF  G I T+R W  P SD   Q+IS+   + ELQIVS+D +  K 
Sbjct: 8  RVISLKWVPFLCISFFALGAIFTSRSW-EPSSDSGSQLISQHHRDHELQIVSDDCAHNKK 67

Query: 67 PAEKRDVITAVYRTHEAIQ 83
            +++DV   V RTHEAIQ
Sbjct: 68 ATQEKDVTGEVLRTHEAIQ 85

BLAST of CmaCh09G006560 vs. Swiss-Prot
Match: B3GT5_ARATH (Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-07
Identity = 28/82 (34.15%), Postives = 52/82 (63.41%), Query Frame = 1

Query: 3  NRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDG-QVISRRRHEQELQIVSED-SS 62
          N+ ++++++ W+P  C+S F  G I T++L       G Q+I + R +QEL+IV++D + 
Sbjct: 5  NKVSKRLTMTWVPLLCISCFFLGAIFTSKLRSASSDSGSQLILQHRRDQELKIVTQDYAH 64

Query: 63 IKMPAEKRDVITAVYRTHEAIQ 83
           K  ++  DV+  V +TH+AI+
Sbjct: 65 EKKKSQDNDVMEEVLKTHKAIE 86

BLAST of CmaCh09G006560 vs. TrEMBL
Match: A0A0A0KY94_CUCSA (Hexosyltransferase OS=Cucumis sativus GN=Csa_4G377730 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.0e-29
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATN-RLWLVPESDGQVISRRRHEQELQIVSEDS 60
          MK RGTRKIS+IW+PFFC SFF FGM+ TN R+W   ES+GQVISRRRHEQELQIVSEDS
Sbjct: 1  MKTRGTRKISIIWLPFFCFSFFFFGMLITNSRIWSASESNGQVISRRRHEQELQIVSEDS 60

Query: 61 SIKMPAEKRDVITAVYRTHEAIQ 83
          SIK+PAEK D++T VYRTHEAIQ
Sbjct: 61 SIKIPAEKTDMMTEVYRTHEAIQ 83

BLAST of CmaCh09G006560 vs. TrEMBL
Match: M5XY44_PRUPE (Hexosyltransferase OS=Prunus persica GN=PRUPE_ppa006755mg PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20
Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDGQVISRRRHEQELQIVSED-S 60
          MKNR +RKIS  WIP FC+  FL GM+ T+R+W+ PES+GQ+IS RR EQELQIVSED +
Sbjct: 1  MKNRSSRKISATWIPIFCIPAFLLGMLITSRMWVAPESNGQLISTRRQEQELQIVSEDCA 60

Query: 61 SIKMPAEKRDVITAVYRTHEAIQ 83
          + K P +++DV+  +Y+THE+IQ
Sbjct: 61 TKKKPGQEKDVMDEIYKTHESIQ 83

BLAST of CmaCh09G006560 vs. TrEMBL
Match: E0CRD4_VITVI (Hexosyltransferase OS=Vitis vinifera GN=VIT_18s0001g04150 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-18
Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDGQVISRRRHEQELQIVSED-S 60
          MKNR ++K S  WIP  C+  F FGM+ TNRLW  PES+ Q+ISRR+HEQELQI+SE  +
Sbjct: 1  MKNRSSKKFSAKWIPIICVLCFCFGMLLTNRLWTPPESNSQLISRRQHEQELQIISEGCT 60

Query: 61 SIKMPAEKRDVITAVYRTHEAIQF 84
          + K P ++RDV+  V +THEAIQ+
Sbjct: 61 TKKKPTQERDVMEEVQKTHEAIQY 84

BLAST of CmaCh09G006560 vs. TrEMBL
Match: A0A061FFP4_THECC (Hexosyltransferase OS=Theobroma cacao GN=TCM_035004 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.4e-18
Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDGQVISRRRHEQELQIVSED-S 60
          MK+R  +KISV WIPF C+ FF  G++  NRLWL  ES+GQ+ISR R EQELQIVSED  
Sbjct: 1  MKHRSPKKISVKWIPFLCICFFTLGILFCNRLWLPLESNGQLISRHRREQELQIVSEDCD 60

Query: 61 SIKMPAEKRDVITAVYRTHEAIQ 83
          + K PA+  DV+  V +THEAIQ
Sbjct: 61 TKKKPAQDNDVMGEVLKTHEAIQ 83

BLAST of CmaCh09G006560 vs. TrEMBL
Match: A0A068VC45_COFCA (Hexosyltransferase OS=Coffea canephora GN=GSCOC_T00001194001 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDGQVISRRRHEQELQIVSEDSS 60
          MK+R + K+SV WIP F +SFF  GM+ TNR W+ PES GQ+IS+ R EQELQI+SED +
Sbjct: 1  MKSRSSGKVSVKWIPIFSISFFFIGMLFTNRFWVPPESGGQLISQHRREQELQIISEDCT 60

Query: 61 IKMPA--EKRDVITAVYRTHEAIQ 83
           K  +  + +DV+  VY+THEAIQ
Sbjct: 61 TKKKSGEQDKDVMDEVYKTHEAIQ 84

BLAST of CmaCh09G006560 vs. TAIR10
Match: AT1G77810.1 (AT1G77810.1 Galactosyltransferase family protein)

HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12
Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 1

Query: 7  RKISVIWIPFFCLSFFLFGMIATNRLWLVPESD--GQVISRRRHEQELQIVSED-SSIKM 66
          R IS+ W+PF C+SFF  G I T+R W  P SD   Q+IS+   + ELQIVS+D +  K 
Sbjct: 8  RVISLKWVPFLCISFFALGAIFTSRSW-EPSSDSGSQLISQHHRDHELQIVSDDCAHNKK 67

Query: 67 PAEKRDVITAVYRTHEAIQ 83
            +++DV   V RTHEAIQ
Sbjct: 68 ATQEKDVTGEVLRTHEAIQ 85

BLAST of CmaCh09G006560 vs. TAIR10
Match: AT1G22015.1 (AT1G22015.1 Galactosyltransferase family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 28/82 (34.15%), Postives = 52/82 (63.41%), Query Frame = 1

Query: 3  NRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDG-QVISRRRHEQELQIVSED-SS 62
          N+ ++++++ W+P  C+S F  G I T++L       G Q+I + R +QEL+IV++D + 
Sbjct: 5  NKVSKRLTMTWVPLLCISCFFLGAIFTSKLRSASSDSGSQLILQHRRDQELKIVTQDYAH 64

Query: 63 IKMPAEKRDVITAVYRTHEAIQ 83
           K  ++  DV+  V +TH+AI+
Sbjct: 65 EKKKSQDNDVMEEVLKTHKAIE 86

BLAST of CmaCh09G006560 vs. NCBI nr
Match: gi|778694510|ref|XP_011653825.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-30
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDGQVISRRRHEQELQIVSEDSS 60
          MK RGTRKIS+IW+PFFC SFF FGM+ TNR+W   ES+GQVISRRRHEQELQIVSEDSS
Sbjct: 1  MKTRGTRKISIIWLPFFCFSFFFFGMLITNRIWSASESNGQVISRRRHEQELQIVSEDSS 60

Query: 61 IKMPAEKRDVITAVYRTHEAIQ 83
          IK+PAEK D++T VYRTHEAIQ
Sbjct: 61 IKIPAEKTDMMTEVYRTHEAIQ 82

BLAST of CmaCh09G006560 vs. NCBI nr
Match: gi|659086801|ref|XP_008444117.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis melo])

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-30
Identity = 65/82 (79.27%), Postives = 74/82 (90.24%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDGQVISRRRHEQELQIVSEDSS 60
          MK+RGTRKIS+IW+PFFC SFF FGM+ TNR+W V ES+GQVISRRRHEQELQIVSEDSS
Sbjct: 1  MKSRGTRKISIIWVPFFCFSFFFFGMLITNRIWSVSESNGQVISRRRHEQELQIVSEDSS 60

Query: 61 IKMPAEKRDVITAVYRTHEAIQ 83
           K+PAEK+DV+T VYRT EAIQ
Sbjct: 61 FKIPAEKKDVMTEVYRTQEAIQ 82

BLAST of CmaCh09G006560 vs. NCBI nr
Match: gi|778694506|ref|XP_011653824.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATN-RLWLVPESDGQVISRRRHEQELQIVSEDS 60
          MK RGTRKIS+IW+PFFC SFF FGM+ TN R+W   ES+GQVISRRRHEQELQIVSEDS
Sbjct: 1  MKTRGTRKISIIWLPFFCFSFFFFGMLITNSRIWSASESNGQVISRRRHEQELQIVSEDS 60

Query: 61 SIKMPAEKRDVITAVYRTHEAIQ 83
          SIK+PAEK D++T VYRTHEAIQ
Sbjct: 61 SIKIPAEKTDMMTEVYRTHEAIQ 83

BLAST of CmaCh09G006560 vs. NCBI nr
Match: gi|659086799|ref|XP_008444116.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis melo])

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28
Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATN-RLWLVPESDGQVISRRRHEQELQIVSEDS 60
          MK+RGTRKIS+IW+PFFC SFF FGM+ TN R+W V ES+GQVISRRRHEQELQIVSEDS
Sbjct: 1  MKSRGTRKISIIWVPFFCFSFFFFGMLITNSRIWSVSESNGQVISRRRHEQELQIVSEDS 60

Query: 61 SIKMPAEKRDVITAVYRTHEAIQ 83
          S K+PAEK+DV+T VYRT EAIQ
Sbjct: 61 SFKIPAEKKDVMTEVYRTQEAIQ 83

BLAST of CmaCh09G006560 vs. NCBI nr
Match: gi|596163873|ref|XP_007222961.1| (hypothetical protein PRUPE_ppa006755mg [Prunus persica])

HSP 1 Score: 106.7 bits (265), Expect = 2.9e-20
Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 1

Query: 1  MKNRGTRKISVIWIPFFCLSFFLFGMIATNRLWLVPESDGQVISRRRHEQELQIVSED-S 60
          MKNR +RKIS  WIP FC+  FL GM+ T+R+W+ PES+GQ+IS RR EQELQIVSED +
Sbjct: 1  MKNRSSRKISATWIPIFCIPAFLLGMLITSRMWVAPESNGQLISTRRQEQELQIVSEDCA 60

Query: 61 SIKMPAEKRDVITAVYRTHEAIQ 83
          + K P +++DV+  +Y+THE+IQ
Sbjct: 61 TKKKPGQEKDVMDEIYKTHESIQ 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
B3GT7_ARATH1.2e-1049.37Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1[more]
B3GT5_ARATH2.8e-0734.15Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=... [more]
Match NameE-valueIdentityDescription
A0A0A0KY94_CUCSA7.0e-2978.31Hexosyltransferase OS=Cucumis sativus GN=Csa_4G377730 PE=3 SV=1[more]
M5XY44_PRUPE2.0e-2059.04Hexosyltransferase OS=Prunus persica GN=PRUPE_ppa006755mg PE=3 SV=1[more]
E0CRD4_VITVI1.5e-1857.14Hexosyltransferase OS=Vitis vinifera GN=VIT_18s0001g04150 PE=3 SV=1[more]
A0A061FFP4_THECC9.4e-1860.24Hexosyltransferase OS=Theobroma cacao GN=TCM_035004 PE=3 SV=1[more]
A0A068VC45_COFCA1.2e-1755.95Hexosyltransferase OS=Coffea canephora GN=GSCOC_T00001194001 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G77810.16.9e-1249.37 Galactosyltransferase family protein[more]
AT1G22015.11.6e-0834.15 Galactosyltransferase family protein[more]
Match NameE-valueIdentityDescription
gi|778694510|ref|XP_011653825.1|4.1e-3079.27PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis sativus][more]
gi|659086801|ref|XP_008444117.1|4.1e-3079.27PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis melo][more]
gi|778694506|ref|XP_011653824.1|1.0e-2878.31PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis sativus][more]
gi|659086799|ref|XP_008444116.1|1.0e-2878.31PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis melo][more]
gi|596163873|ref|XP_007222961.1|2.9e-2059.04hypothetical protein PRUPE_ppa006755mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002659Glyco_trans_31
IPR025298DUF4094
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
Vocabulary: Molecular Function
TermDefinition
GO:0008378galactosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0000139 Golgi membrane
molecular_function GO:0008378 galactosyltransferase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G006560.1CmaCh09G006560.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002659Glycosyl transferase, family 31PANTHERPTHR11214BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASEcoord: 4..82
score: 9.2
IPR025298Domain of unknown function DUF4094PFAMPF13334DUF4094coord: 12..82
score: 7.1
NoneNo IPR availablePANTHERPTHR11214:SF74BETA-1,3-GALACTOSYLTRANSFERASE 7-RELATEDcoord: 4..82
score: 9.2

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh09G006560CmaCh01G014100Cucurbita maxima (Rimu)cmacmaB053