CmaCh07G005770.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTAACGGCCACCGCCGATCTTCGTTTGGAGATAGCCTTTTCCCCTACCAAACCTCCGTACCGGAAAACGGCGATGCTTCTGTCGTGGATAATATACGGGGAAGATTGGCGGAAGCAGAGTCGCGACTGGCTGTAGTTCGGGCTCGGGAGGTGGAGCTCAGCCGCCTCTTGGAGGAAATGAAACGTTTAGTCTCTGTGATGGAGATTCTCGAGAACTACCTGAAACGGCAGTATCGTGACCGCCAAGAGTATGTGGTTCGTCTTCTCTCCCCTGTAGCTTGA ATGTGTAACGGCCACCGCCGATCTTCGTTTGGAGATAGCCTTTTCCCCTACCAAACCTCCGTACCGGAAAACGGCGATGCTTCTGTCGTGGATAATATACGGGGAAGATTGGCGGAAGCAGAGTCGCGACTGGCTGTAGTTCGGGCTCGGGAGGTGGAGCTCAGCCGCCTCTTGGAGGAAATGAAACGTTTAGTCTCTGTGATGGAGATTCTCGAGAACTACCTGAAACGGCAGTATCGTGACCGCCAAGAGTATGTGGTTCGTCTTCTCTCCCCTGTAGCTTGA ATGTGTAACGGCCACCGCCGATCTTCGTTTGGAGATAGCCTTTTCCCCTACCAAACCTCCGTACCGGAAAACGGCGATGCTTCTGTCGTGGATAATATACGGGGAAGATTGGCGGAAGCAGAGTCGCGACTGGCTGTAGTTCGGGCTCGGGAGGTGGAGCTCAGCCGCCTCTTGGAGGAAATGAAACGTTTAGTCTCTGTGATGGAGATTCTCGAGAACTACCTGAAACGGCAGTATCGTGACCGCCAAGAGTATGTGGTTCGTCTTCTCTCCCCTGTAGCTTGA MCNGHRRSSFGDSLFPYQTSVPENGDASVVDNIRGRLAEAESRLAVVRAREVELSRLLEEMKRLVSVMEILENYLKRQYRDRQEYVVRLLSPVA
BLAST of CmaCh07G005770.1 vs. Swiss-Prot
Match: SKI34_ARATH (Protein SKIP34 OS=Arabidopsis thaliana GN=SKIP34 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 6.4e-15 Identity = 47/94 (50.00%), Postives = 65/94 (69.15%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. TrEMBL
Match: A0A0A0KIR5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G498950 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 4.0e-32 Identity = 78/94 (82.98%), Postives = 80/94 (85.11%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. TrEMBL
Match: A0A067K0P3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18706 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 4.6e-20 Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. TrEMBL
Match: B9T6T7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0270660 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 6.6e-19 Identity = 58/95 (61.05%), Postives = 68/95 (71.58%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. TrEMBL
Match: V4RX85_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026840mg PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.9e-18 Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. TrEMBL
Match: W9SN91_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026774 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.6e-17 Identity = 59/95 (62.11%), Postives = 70/95 (73.68%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. TAIR10
Match: AT5G65495.1 (AT5G65495.1 unknown protein) HSP 1 Score: 81.3 bits (199), Expect = 3.6e-16 Identity = 47/94 (50.00%), Postives = 65/94 (69.15%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. NCBI nr
Match: gi|778718976|ref|XP_011657944.1| (PREDICTED: protein SKIP34 [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 5.8e-32 Identity = 78/94 (82.98%), Postives = 80/94 (85.11%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. NCBI nr
Match: gi|659079949|ref|XP_008440533.1| (PREDICTED: protein SKIP34 [Cucumis melo]) HSP 1 Score: 144.1 bits (362), Expect = 1.3e-31 Identity = 78/94 (82.98%), Postives = 80/94 (85.11%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. NCBI nr
Match: gi|802673988|ref|XP_012081673.1| (PREDICTED: protein SKIP34 [Jatropha curcas]) HSP 1 Score: 105.1 bits (261), Expect = 6.6e-20 Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. NCBI nr
Match: gi|255586651|ref|XP_002533956.1| (PREDICTED: protein SKIP34 [Ricinus communis]) HSP 1 Score: 101.3 bits (251), Expect = 9.5e-19 Identity = 58/95 (61.05%), Postives = 68/95 (71.58%), Query Frame = 1
BLAST of CmaCh07G005770.1 vs. NCBI nr
Match: gi|567867271|ref|XP_006426258.1| (hypothetical protein CICLE_v10026840mg [Citrus clementina]) HSP 1 Score: 99.8 bits (247), Expect = 2.8e-18 Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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