CmaCh05G003580.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCTCCGCTCACCATGCCCAGACCACAACAAAGATTCCGCGGTGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGTAAGTCCATTCTCCTAGCTTTAAACTAAGTCCATTCGCCATCCTTTTTGTTCACTGATTTTTGTTCATACAGGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAGGCCGCGCGCCTCATGTGCGGGCCAAGGGCGCGCACTAACTTCCCTTACGACGCCTCCCTGTCGCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTTCACCGCTGCTACATGGCCTCCTTGCAACTCACCAAGCAATCCTCCTCTGCTGCACGTCGCCCTCAAACCGACACAATCCGAACCGATTTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAGCCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGGGAGCCGTTGGATGATGATCATATTCAACAAATGATCGAGGAGCTCCTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGCCTGCAGGCTCAGCCCATTTGACATTCAACTATAGATCTCCGCCTCTAATTATGTACAAAATATGAATTAATTTAGCTAATTTAATTAACTACCCGACTTTTGATCATTTGAGGTCATTATTTCCTCTTGGCCAACCCAGATTTGTTTCTCTCTGGTTTGGCCAATTGAGTGGCGGCGCCCCCATTTTATTTCATGTACTATTTTCCAAATCCCTTTATATTACATAATTAGTATGAAATCCTTATAATTTCATTTCCCC TGTCTCCGCTCACCATGCCCAGACCACAACAAAGATTCCGCGGTGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAGGCCGCGCGCCTCATGTGCGGGCCAAGGGCGCGCACTAACTTCCCTTACGACGCCTCCCTGTCGCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTTCACCGCTGCTACATGGCCTCCTTGCAACTCACCAAGCAATCCTCCTCTGCTGCACGTCGCCCTCAAACCGACACAATCCGAACCGATTTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAGCCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGGGAGCCGTTGGATGATGATCATATTCAACAAATGATCGAGGAGCTCCTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGCCTGCAGGCTCAGCCCATTTGACATTCAACTATAGATCTCCGCCTCTAATTATGTACAAAATATGAATTAATTTAGCTAATTTAATTAACTACCCGACTTTTGATCATTTGAGGTCATTATTTCCTCTTGGCCAACCCAGATTTGTTTCTCTCTGGTTTGGCCAATTGAGTGGCGGCGCCCCCATTTTATTTCATGTACTATTTTCCAAATCCCTTTATATTACATAATTAGTATGAAATCCTTATAATTTCATTTCCCC ATGCCCAGACCACAACAAAGATTCCGCGGTGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAGGCCGCGCGCCTCATGTGCGGGCCAAGGGCGCGCACTAACTTCCCTTACGACGCCTCCCTGTCGCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTTCACCGCTGCTACATGGCCTCCTTGCAACTCACCAAGCAATCCTCCTCTGCTGCACGTCGCCCTCAAACCGACACAATCCGAACCGATTTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAGCCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGGGAGCCGTTGGATGATGATCATATTCAACAAATGATCGAGGAGCTCCTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGCCTGCAGGCTCAGCCCATTTGA MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTSGIAPVGVEADVTSTKKVKLESVDRGEPLDDDHIQQMIEELLDYGGIELRSAAGLQAQPI
BLAST of CmaCh05G003580.1 vs. Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.2e-55 Identity = 117/182 (64.29%), Postives = 137/182 (75.27%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. Swiss-Prot
Match: PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.2e-43 Identity = 98/170 (57.65%), Postives = 118/170 (69.41%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.5e-25 Identity = 83/194 (42.78%), Postives = 110/194 (56.70%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 3.5e-22 Identity = 77/177 (43.50%), Postives = 100/177 (56.50%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 5.1e-21 Identity = 76/184 (41.30%), Postives = 100/184 (54.35%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TrEMBL
Match: A0A0A0LSL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382540 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.6e-77 Identity = 156/175 (89.14%), Postives = 160/175 (91.43%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TrEMBL
Match: F6H3U5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06000 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 1.8e-57 Identity = 124/185 (67.03%), Postives = 143/185 (77.30%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TrEMBL
Match: A0A067FJG7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029507mg PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 6.4e-55 Identity = 125/194 (64.43%), Postives = 141/194 (72.68%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TrEMBL
Match: V4UBY1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009593mg PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 6.4e-55 Identity = 125/194 (64.43%), Postives = 141/194 (72.68%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TrEMBL
Match: A0A0M3SU38_9ROSA (AP2/EREBP family transcription factor-like protein 19 OS=Prunus pseudocerasus PE=2 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 3.2e-54 Identity = 123/194 (63.40%), Postives = 140/194 (72.16%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TAIR10
Match: AT5G25190.1 (AT5G25190.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 216.1 bits (549), Expect = 1.8e-56 Identity = 117/182 (64.29%), Postives = 137/182 (75.27%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TAIR10
Match: AT1G15360.1 (AT1G15360.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26 Identity = 83/194 (42.78%), Postives = 110/194 (56.70%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TAIR10
Match: AT5G25390.2 (AT5G25390.2 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 106.3 bits (264), Expect = 2.0e-23 Identity = 77/177 (43.50%), Postives = 100/177 (56.50%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TAIR10
Match: AT5G11190.1 (AT5G11190.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 102.4 bits (254), Expect = 2.9e-22 Identity = 76/184 (41.30%), Postives = 100/184 (54.35%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-18 Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. NCBI nr
Match: gi|659088962|ref|XP_008445253.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]) HSP 1 Score: 301.2 bits (770), Expect = 1.2e-78 Identity = 159/175 (90.86%), Postives = 161/175 (92.00%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. NCBI nr
Match: gi|449441876|ref|XP_004138708.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis sativus]) HSP 1 Score: 297.0 bits (759), Expect = 2.3e-77 Identity = 156/175 (89.14%), Postives = 160/175 (91.43%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. NCBI nr
Match: gi|225430392|ref|XP_002285373.1| (PREDICTED: protein PPLZ02 [Vitis vinifera]) HSP 1 Score: 230.3 bits (586), Expect = 2.6e-57 Identity = 124/185 (67.03%), Postives = 143/185 (77.30%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. NCBI nr
Match: gi|296082087|emb|CBI21092.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 224.6 bits (571), Expect = 1.4e-55 Identity = 118/172 (68.60%), Postives = 130/172 (75.58%), Query Frame = 1
BLAST of CmaCh05G003580.1 vs. NCBI nr
Match: gi|567916622|ref|XP_006450317.1| (hypothetical protein CICLE_v10009593mg [Citrus clementina]) HSP 1 Score: 221.9 bits (564), Expect = 9.2e-55 Identity = 125/194 (64.43%), Postives = 141/194 (72.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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