CmaCh05G003580 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh05G003580
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionEthylene-responsive transcription factor
LocationCma_Chr05 : 1604135 .. 1604999 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCTCCGCTCACCATGCCCAGACCACAACAAAGATTCCGCGGTGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGTAAGTCCATTCTCCTAGCTTTAAACTAAGTCCATTCGCCATCCTTTTTGTTCACTGATTTTTGTTCATACAGGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAGGCCGCGCGCCTCATGTGCGGGCCAAGGGCGCGCACTAACTTCCCTTACGACGCCTCCCTGTCGCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTTCACCGCTGCTACATGGCCTCCTTGCAACTCACCAAGCAATCCTCCTCTGCTGCACGTCGCCCTCAAACCGACACAATCCGAACCGATTTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAGCCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGGGAGCCGTTGGATGATGATCATATTCAACAAATGATCGAGGAGCTCCTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGCCTGCAGGCTCAGCCCATTTGACATTCAACTATAGATCTCCGCCTCTAATTATGTACAAAATATGAATTAATTTAGCTAATTTAATTAACTACCCGACTTTTGATCATTTGAGGTCATTATTTCCTCTTGGCCAACCCAGATTTGTTTCTCTCTGGTTTGGCCAATTGAGTGGCGGCGCCCCCATTTTATTTCATGTACTATTTTCCAAATCCCTTTATATTACATAATTAGTATGAAATCCTTATAATTTCATTTCCCC

mRNA sequence

TGTCTCCGCTCACCATGCCCAGACCACAACAAAGATTCCGCGGTGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAGGCCGCGCGCCTCATGTGCGGGCCAAGGGCGCGCACTAACTTCCCTTACGACGCCTCCCTGTCGCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTTCACCGCTGCTACATGGCCTCCTTGCAACTCACCAAGCAATCCTCCTCTGCTGCACGTCGCCCTCAAACCGACACAATCCGAACCGATTTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAGCCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGGGAGCCGTTGGATGATGATCATATTCAACAAATGATCGAGGAGCTCCTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGCCTGCAGGCTCAGCCCATTTGACATTCAACTATAGATCTCCGCCTCTAATTATGTACAAAATATGAATTAATTTAGCTAATTTAATTAACTACCCGACTTTTGATCATTTGAGGTCATTATTTCCTCTTGGCCAACCCAGATTTGTTTCTCTCTGGTTTGGCCAATTGAGTGGCGGCGCCCCCATTTTATTTCATGTACTATTTTCCAAATCCCTTTATATTACATAATTAGTATGAAATCCTTATAATTTCATTTCCCC

Coding sequence (CDS)

ATGCCCAGACCACAACAAAGATTCCGCGGTGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAGGCCGCGCGCCTCATGTGCGGGCCAAGGGCGCGCACTAACTTCCCTTACGACGCCTCCCTGTCGCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTTCACCGCTGCTACATGGCCTCCTTGCAACTCACCAAGCAATCCTCCTCTGCTGCACGTCGCCCTCAAACCGACACAATCCGAACCGATTTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAGCCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGGGAGCCGTTGGATGATGATCATATTCAACAAATGATCGAGGAGCTCCTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGCCTGCAGGCTCAGCCCATTTGA

Protein sequence

MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTSGIAPVGVEADVTSTKKVKLESVDRGEPLDDDHIQQMIEELLDYGGIELRSAAGLQAQPI
Homology
[Close]
BLAST of CmaCh05G003580 vs. Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.2e-55
Identity = 117/182 (64.29%), Postives = 137/182 (75.27%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ +   +SSS+LLSATLTAKLH+CYMASLQ+TKQ+ +   + QT T R+  + + 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQT---QTQTQTARSQSADSD 120

Query: 121 GIA--PVGVEADVTSTKKVKLESVDRG-----EPLDDDHIQQMIEELLDYGGIELRSAAG 176
           G+      +   VT T ++K E  +        PL++DHI+QMIEELL YG IEL S   
Sbjct: 121 GVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 179

[Close]
BLAST of CmaCh05G003580 vs. Swiss-Prot
Match: PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-43
Identity = 98/170 (57.65%), Postives = 118/170 (69.41%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ + S+SSSS+LLSATL AKLHRCYMASLQ+T+ SS        +  R   S  +
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSS------LPEAPRIIASPNN 120

Query: 121 GIAPVGVEADV---------------TSTKKVKLESVDRGEPLDDDHIQQ 156
            +  +G +A +                  KKVK+E   + +PL++DHI Q
Sbjct: 121 AVKGIGADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]
BLAST of CmaCh05G003580 vs. Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-25
Identity = 83/194 (42.78%), Postives = 110/194 (56.70%), Query Frame = 1 

Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  D-----------------ASLSRSSSSRLLSATLTAKLHRC------YMASLQLTKQSSS 125
           +                 +++S S+SS  LS+ L+AKL +C       +  L+L   SS 
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSH 124

Query: 126 AARRPQTDTIRTDFS--VTSGIAPVGVEADVTS----------TKKVKLESVDRGEPLDD 163
                +    ++D S  +T  + P     + TS          T +V++    R E LD+
Sbjct: 125 IGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGG-SREEVLDE 184

[Close]
BLAST of CmaCh05G003580 vs. Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.5e-22
Identity = 77/177 (43.50%), Postives = 100/177 (56.50%), Query Frame = 1 

Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YMASLQLTKQSSSAARRPQTDT 125
             S   +S        S + LS  L AKL + C     Y+  L+L   SS      +   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 IRTDFSVTSGIAPVGVEADV-----TSTKKVKLESVDRGEPLDDDHIQQMIEELLDY 164
            +T  +    +  +G + +        T K+K+ + D  E  DD    QMIEELL++
Sbjct: 125 SKTSPNWVK-LVELGDKVNARPGGDIETNKMKVRNEDVQE--DDQMAMQMIEELLNW 178

[Close]
BLAST of CmaCh05G003580 vs. Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.1e-21
Identity = 76/184 (41.30%), Postives = 100/184 (54.35%), Query Frame = 1 

Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  DASLSRSS----------SSRLLSATLTAKLHRC------YMASLQLTKQSSSAA---RR 125
             S   S           S + LS  L AKL +        +  L+L   SS      +R
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 PQTDTIRT---DFSVTSGIAPVGVEADVTSTKKVKLESVDRGEPL---DDDHI-QQMIEE 164
             + T  T      + + +    V+  +T+  K  +E  +  E     D+D +  +MIEE
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEMIEE 184

[Close]
BLAST of CmaCh05G003580 vs. TrEMBL
Match: A0A0A0LSL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382540 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.6e-77
Identity = 156/175 (89.14%), Postives = 160/175 (91.43%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTD IRTDFSV S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPV-GVEADVTSTKKVKLESVDRGEP-----LDDDHIQQMIEELLDYGGIELR 170
           GIAPV  VE D  + KKVK+ESVD  EP     LDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]
BLAST of CmaCh05G003580 vs. TrEMBL
Match: F6H3U5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06000 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.8e-57
Identity = 124/185 (67.03%), Postives = 143/185 (77.30%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ + S+SSSS+LLSATLTAKLHRCYMASLQLTKQS    ++P T  + T  S+  
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQLTKQSLHEPQKPPTSHVATTTSIAG 120

Query: 121 GIA----------PVGVEADVTS--TKKVKLES-VDRGEPLDDDHIQQMIEELLDYGGIE 173
            +           PV V+    +   KKV+++S   + +PL+DDHIQQMIEELLDYG IE
Sbjct: 121 KVGESGQWSPEKRPVTVQQPEANWVVKKVQVDSNTQQFKPLEDDHIQQMIEELLDYGSIE 180

[Close]
BLAST of CmaCh05G003580 vs. TrEMBL
Match: A0A067FJG7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029507mg PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.4e-55
Identity = 125/194 (64.43%), Postives = 141/194 (72.68%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ + S SSSS+LLSATLTAKLHRCYMASLQ+TK  SSAA  PQ     +  S  S
Sbjct: 61  TNFPYNPNASHSSSSKLLSATLTAKLHRCYMASLQMTK--SSAANEPQ-KAPASHVSTPS 120

Query: 121 GIA--------------PVGVEADV----TSTKKVKLESVDRGEPLDDDHIQQMIEELLD 177
           G A              P+ V+        + KK ++E   + +PL+DDHI+QMIEELLD
Sbjct: 121 GNATRINEMGKHLLEMRPMQVQGSTEPINRAVKKEQVEIAQQFKPLEDDHIEQMIEELLD 180

[Close]
BLAST of CmaCh05G003580 vs. TrEMBL
Match: V4UBY1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009593mg PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.4e-55
Identity = 125/194 (64.43%), Postives = 141/194 (72.68%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ + S SSSS+LLSATLTAKLHRCYMASLQ+TK  SSAA  PQ     +  S  S
Sbjct: 61  TNFPYNPNASHSSSSKLLSATLTAKLHRCYMASLQMTK--SSAANEPQ-KAPASHVSTPS 120

Query: 121 GIA--------------PVGVEADV----TSTKKVKLESVDRGEPLDDDHIQQMIEELLD 177
           G A              P+ V+        + KK ++E   + +PL+DDHI+QMIEELLD
Sbjct: 121 GNATRVNEMGKHLLEMRPMQVQGSTEPINRAVKKEQVEIAQQFKPLEDDHIEQMIEELLD 180

[Close]
BLAST of CmaCh05G003580 vs. TrEMBL
Match: A0A0M3SU38_9ROSA (AP2/EREBP family transcription factor-like protein 19 OS=Prunus pseudocerasus PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-54
Identity = 123/194 (63.40%), Postives = 140/194 (72.16%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ + S+SS+S+LLSATLTAKLHRCYMASLQ+TK S    ++PQ   + T      
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPQPCFVDTKNDNAE 120

Query: 121 GIAPVGV--------------EADVTST---KKVKLESVDRG-EPLDDDHIQQMIEELLD 177
               +G+              E + T      KVK+ES  +  +PL+DDHI+QMIEELL 
Sbjct: 121 KAIELGMNFPEKKPETHHEQEEPEETMNWVFSKVKVESSQQQFKPLEDDHIEQMIEELLH 180

[Close]
BLAST of CmaCh05G003580 vs. TAIR10
Match: AT5G25190.1 (AT5G25190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-56
Identity = 117/182 (64.29%), Postives = 137/182 (75.27%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ +   +SSS+LLSATLTAKLH+CYMASLQ+TKQ+ +   + QT T R+  + + 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQT---QTQTQTARSQSADSD 120

Query: 121 GIA--PVGVEADVTSTKKVKLESVDRG-----EPLDDDHIQQMIEELLDYGGIELRSAAG 176
           G+      +   VT T ++K E  +        PL++DHI+QMIEELL YG IEL S   
Sbjct: 121 GVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 179

[Close]
BLAST of CmaCh05G003580 vs. TAIR10
Match: AT1G15360.1 (AT1G15360.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26
Identity = 83/194 (42.78%), Postives = 110/194 (56.70%), Query Frame = 1 

Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  D-----------------ASLSRSSSSRLLSATLTAKLHRC------YMASLQLTKQSSS 125
           +                 +++S S+SS  LS+ L+AKL +C       +  L+L   SS 
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSH 124

Query: 126 AARRPQTDTIRTDFS--VTSGIAPVGVEADVTS----------TKKVKLESVDRGEPLDD 163
                +    ++D S  +T  + P     + TS          T +V++    R E LD+
Sbjct: 125 IGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGG-SREEVLDE 184

[Close]
BLAST of CmaCh05G003580 vs. TAIR10
Match: AT5G25390.2 (AT5G25390.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-23
Identity = 77/177 (43.50%), Postives = 100/177 (56.50%), Query Frame = 1 

Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YMASLQLTKQSSSAARRPQTDT 125
             S   +S        S + LS  L AKL + C     Y+  L+L   SS      +   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 IRTDFSVTSGIAPVGVEADV-----TSTKKVKLESVDRGEPLDDDHIQQMIEELLDY 164
            +T  +    +  +G + +        T K+K+ + D  E  DD    QMIEELL++
Sbjct: 125 SKTSPNWVK-LVELGDKVNARPGGDIETNKMKVRNEDVQE--DDQMAMQMIEELLNW 178

[Close]
BLAST of CmaCh05G003580 vs. TAIR10
Match: AT5G11190.1 (AT5G11190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-22
Identity = 76/184 (41.30%), Postives = 100/184 (54.35%), Query Frame = 1 

Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  DASLSRSS----------SSRLLSATLTAKLHRC------YMASLQLTKQSSSAA---RR 125
             S   S           S + LS  L AKL +        +  L+L   SS      +R
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 PQTDTIRT---DFSVTSGIAPVGVEADVTSTKKVKLESVDRGEPL---DDDHI-QQMIEE 164
             + T  T      + + +    V+  +T+  K  +E  +  E     D+D +  +MIEE
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEMIEE 184

[Close]
BLAST of CmaCh05G003580 vs. TAIR10
Match: AT1G50640.1 (AT1G50640.1 ethylene responsive element binding factor 3)

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-18
Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = 1 

Query: 7  RFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYD 66
          RFRGVR+R WG + +EIR P  K R+WLGTF++AE+AARAYD AAR + GP+A+TNFP D
Sbjct: 27 RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPID 86

Query: 67 AS 69
          +S
Sbjct: 87 SS 88

[Close]
BLAST of CmaCh05G003580 vs. NCBI nr
Match: gi|659088962|ref|XP_008445253.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 1.2e-78
Identity = 159/175 (90.86%), Postives = 161/175 (92.00%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 41  MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 100

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTD IRTDFSV S
Sbjct: 101 TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 160

Query: 121 GIAP-VGVEADVTSTKKVKLESVDRGEP-----LDDDHIQQMIEELLDYGGIELR 170
           GIAP   VE D T+ KKVK+ESVD GEP     LDDDHIQQMIEELLDYGGIELR
Sbjct: 161 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 215

[Close]
BLAST of CmaCh05G003580 vs. NCBI nr
Match: gi|449441876|ref|XP_004138708.1| (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis sativus])

HSP 1 Score: 297.0 bits (759), Expect = 2.3e-77
Identity = 156/175 (89.14%), Postives = 160/175 (91.43%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTD IRTDFSV S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPV-GVEADVTSTKKVKLESVDRGEP-----LDDDHIQQMIEELLDYGGIELR 170
           GIAPV  VE D  + KKVK+ESVD  EP     LDDDHIQQMIEELLDYGGIELR
Sbjct: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]
BLAST of CmaCh05G003580 vs. NCBI nr
Match: gi|225430392|ref|XP_002285373.1| (PREDICTED: protein PPLZ02 [Vitis vinifera])

HSP 1 Score: 230.3 bits (586), Expect = 2.6e-57
Identity = 124/185 (67.03%), Postives = 143/185 (77.30%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ + S+SSSS+LLSATLTAKLHRCYMASLQLTKQS    ++P T  + T  S+  
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQLTKQSLHEPQKPPTSHVATTTSIAG 120

Query: 121 GIA----------PVGVEADVTS--TKKVKLES-VDRGEPLDDDHIQQMIEELLDYGGIE 173
            +           PV V+    +   KKV+++S   + +PL+DDHIQQMIEELLDYG IE
Sbjct: 121 KVGESGQWSPEKRPVTVQQPEANWVVKKVQVDSNTQQFKPLEDDHIQQMIEELLDYGSIE 180

[Close]
BLAST of CmaCh05G003580 vs. NCBI nr
Match: gi|296082087|emb|CBI21092.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 224.6 bits (571), Expect = 1.4e-55
Identity = 118/172 (68.60%), Postives = 130/172 (75.58%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ + S+SSSS+LLSATLTAKLHRCYMASLQLTKQS    ++P T  + T  S+  
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQLTKQSLHEPQKPPTSHVATTTSIA- 120

Query: 121 GIAPVGVEADVTSTKKVKLESVDRGEPLDDDHIQQMIEELLDYGGIELRSAA 173
                                   G+PL+DDHIQQMIEELLDYG IEL S +
Sbjct: 121 ------------------------GKPLEDDHIQQMIEELLDYGSIELCSGS 147

[Close]
BLAST of CmaCh05G003580 vs. NCBI nr
Match: gi|567916622|ref|XP_006450317.1| (hypothetical protein CICLE_v10009593mg [Citrus clementina])

HSP 1 Score: 221.9 bits (564), Expect = 9.2e-55
Identity = 125/194 (64.43%), Postives = 141/194 (72.68%), Query Frame = 1 

Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120
           TNFPY+ + S SSSS+LLSATLTAKLHRCYMASLQ+TK  SSAA  PQ     +  S  S
Sbjct: 61  TNFPYNPNASHSSSSKLLSATLTAKLHRCYMASLQMTK--SSAANEPQ-KAPASHVSTPS 120

Query: 121 GIA--------------PVGVEADV----TSTKKVKLESVDRGEPLDDDHIQQMIEELLD 177
           G A              P+ V+        + KK ++E   + +PL+DDHI+QMIEELLD
Sbjct: 121 GNATRVNEMGKHLLEMRPMQVQGSTEPINRAVKKEQVEIAQQFKPLEDDHIEQMIEELLD 180

The following BLAST results are available for this feature:
BLAST of CmaCh05G003580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF03_ARATH3.2e-5564.29Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF00... [more]
PZ02_LUPPO1.2e-4357.65Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1[more]
WIN1_ARATH4.5e-2542.78Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE... [more]
SHN3_ARATH3.5e-2243.50Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3... [more]
SHN2_ARATH5.1e-2141.30Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2... [more]
BLAST of CmaCh05G003580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSL8_CUCSA1.6e-7789.14Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382540 PE=4 SV=1[more]
F6H3U5_VITVI1.8e-5767.03Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06000 PE=4 SV=... [more]
A0A067FJG7_CITSI6.4e-5564.43Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029507mg PE=4 SV=1[more]
V4UBY1_9ROSI6.4e-5564.43Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009593mg PE=4 SV=1[more]
A0A0M3SU38_9ROSA3.2e-5463.40AP2/EREBP family transcription factor-like protein 19 OS=Prunus pseudocerasus PE... [more]
BLAST of CmaCh05G003580 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25190.11.8e-5664.29 Integrase-type DNA-binding superfamily protein[more]
AT1G15360.12.5e-2642.78 Integrase-type DNA-binding superfamily protein[more]
AT5G25390.22.0e-2343.50 Integrase-type DNA-binding superfamily protein[more]
AT5G11190.12.9e-2241.30 Integrase-type DNA-binding superfamily protein[more]
AT1G50640.11.5e-1864.52 ethylene responsive element binding factor 3[more]
BLAST of CmaCh05G003580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088962|ref|XP_008445253.1|1.2e-7890.86PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo][more]
gi|449441876|ref|XP_004138708.1|2.3e-7789.14PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis sativus... [more]
gi|225430392|ref|XP_002285373.1|2.6e-5767.03PREDICTED: protein PPLZ02 [Vitis vinifera][more]
gi|296082087|emb|CBI21092.3|1.4e-5568.60unnamed protein product [Vitis vinifera][more]
gi|567916622|ref|XP_006450317.1|9.2e-5564.43hypothetical protein CICLE_v10009593mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G003580.1CmaCh05G003580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..46
score: 9.2E-11coord: 8..19
score: 9.2
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 7..64
score: 8.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 7..56
score: 6.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 7..70
score: 2.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 7..64
score: 20
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 7..66
score: 1.05
IPR017392AP2/ERF transcription factor ERF/PTI6PANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..170
score: 5.3
NoneNo IPR availablePANTHERPTHR31194:SF4ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003coord: 1..170
score: 5.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh05G003580Cp4.1LG11g03060Cucurbita pepo (Zucchini)cmacpeB766
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh05G003580Cucumber (Chinese Long) v3cmacucB0935
CmaCh05G003580Cucumber (Chinese Long) v3cmacucB0944
CmaCh05G003580Watermelon (97103) v2cmawmbB817
CmaCh05G003580Watermelon (97103) v2cmawmbB829
CmaCh05G003580Watermelon (97103) v2cmawmbB832
CmaCh05G003580Wax gourdcmawgoB0945
CmaCh05G003580Wax gourdcmawgoB0967
CmaCh05G003580Cucurbita maxima (Rimu)cmacmaB066
CmaCh05G003580Cucurbita maxima (Rimu)cmacmaB199
CmaCh05G003580Cucumber (Gy14) v1cgycmaB0462
CmaCh05G003580Cucumber (Gy14) v1cgycmaB0758
CmaCh05G003580Cucurbita moschata (Rifu)cmacmoB754
CmaCh05G003580Cucurbita moschata (Rifu)cmacmoB770
CmaCh05G003580Cucurbita moschata (Rifu)cmacmoB786
CmaCh05G003580Wild cucumber (PI 183967)cmacpiB801
CmaCh05G003580Wild cucumber (PI 183967)cmacpiB809
CmaCh05G003580Cucumber (Chinese Long) v2cmacuB792
CmaCh05G003580Cucumber (Chinese Long) v2cmacuB800
CmaCh05G003580Melon (DHL92) v3.5.1cmameB725
CmaCh05G003580Melon (DHL92) v3.5.1cmameB743
CmaCh05G003580Watermelon (Charleston Gray)cmawcgB700
CmaCh05G003580Watermelon (Charleston Gray)cmawcgB712
CmaCh05G003580Watermelon (97103) v1cmawmB753
CmaCh05G003580Watermelon (97103) v1cmawmB756
CmaCh05G003580Cucurbita pepo (Zucchini)cmacpeB785
CmaCh05G003580Cucurbita pepo (Zucchini)cmacpeB797
CmaCh05G003580Bottle gourd (USVL1VR-Ls)cmalsiB727
CmaCh05G003580Bottle gourd (USVL1VR-Ls)cmalsiB739
CmaCh05G003580Cucumber (Gy14) v2cgybcmaB258
CmaCh05G003580Cucumber (Gy14) v2cgybcmaB557
CmaCh05G003580Melon (DHL92) v3.6.1cmamedB818
CmaCh05G003580Melon (DHL92) v3.6.1cmamedB838
CmaCh05G003580Silver-seed gourdcarcmaB0189
CmaCh05G003580Silver-seed gourdcarcmaB0901
CmaCh05G003580Silver-seed gourdcarcmaB1357