CmaCh01G002130.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAATTGGGTTAATCAGGAAACTCCATTTTCCGTTTGGGAAAGAGGAAACTTCGGCCGCCTCTCTCAGCCACTCGTCGGCCCCTCTCTTAAACCTCACACACCCGAACTCTCTCCCAAAACCTCTGTATTCCTCCTCTTCTTCCGCCACCGTCCTCTTTGGATTCGACAGCTTACGACCACACCTCTGAAACTCGGTAAAATTTGTAGATATTTCTTTACTTTGAATTGAAATGAGAACGCTTTATTTCATTGTTTTATGTCTTCTTCTTCGTAGTTTGATTGGCTTGCATCTGGGTTTTGTTATTTGTTTTTTCGATGTGGTTTCATTTCTGTTTCTGCCAAATTGGTTGTTGCCGTTTACGATGTACCAAGTCGTTGCTTAAAGTTATCAGAAAAATTGAGTTCAAGCATTTGTATTTGTCGAAAGCCTTTTTAGGGGAAGGGAAAGGGTTATGAACTGATGGATGATAAGGTAACTATTCCTAGGGAAAATGTTAACTGGATTTCTGATACAGTGTCTTTAAAAACAGCAGCGAAAAAATAGTCTAGGTACGTACACACAGATATTAATTTTTTCTTATAAAAGCATACTCTACTGAAGGCTGTAATAGGGTAGTGTTTTTTGTTTGAAGACTAGAGATAAAATGATAAATTCTCTGATTCTGATTGAAATATTAAAATTTTGAATGAGAAGACATGCACCATAATTCTATTGTTTATTTTGAAGCACATTTTCTTCCATTTTTTATGATGTTTATGATTTCTGGAATGCTAGGAAGTAGAAATGGCGGGAAAATCCGGTAAAGGGAGGAATAGGAAAGGGGCGCACCATGCTACAAATAATTCTGAGGCACTAGTTTCTTCTGCTGCTTCAAAAGATGTTAATAATGGTGCTTTGGAGTCGAAAGCAGAGCCTGTTGAATCAGTCGAGGAATCGTCAGATATTAAGGCAGACATCAAAGAATCTGAAACAGCTGCTCCAGAAAGTCAGCCAAAGCAAGGTGTGTTTTCATTATTAGTCCAATTGATCCTATATCAAGGAGAACTCTTGAGGTGCTTGAACGTCGAATTTGACATCAATTGTGACCGATTCTATATTTTATTTTATTTTTTTTAAAAAGCATATGGAATGTAAATAATTTGAAATGGAGTACAAAGCATGTTTGGGAAGTTGATCTCTTTTCAATGTGATATAGATGTTTTTAAAAATATGGAATTTCGCATTTTTGAAGCTCTTTTTTTTTGTTTTTATAAAAAAAATGTAGCTTGATTTAACTAAGAGGTTTTTTTAGTCATAGAACAAGGAAGATAACGAAGTGTGCTCTGCCCCGAGGTCCTAATCTACTTAATGTGGTTATTTTGGATTTCAGCATCGTAGGGAAAATATCTTTCAGTGTCTGGTTTTCAAACTATAGTTCGTAAGCACAAGATAACAATGAGTCCGGGAAAAGTTATATTTCTTCTCGATATTTTTTTTTATCATACGTCTTCTAGGGTTAAGCTTTTGGTCATCAGTTCATGTGTTTGGTAATATGGTATTTGTACACTCATATTTGACTCAACCATAGTACTTTATGAAGTGAGGATGTCCTTTCAAATTTGAATGCAATATTGAACATGATCACTTACTTTGATGTTGGTTCTCATCATTTTTTTGCCCCACCAATCGGTTTGCAGGTGAACTTCATCTTTATCCGCTATGTGTCAAAACACAAAGCGGCGAAAAGCTTGAATTGCAAGTAAGTCAATTTGAACATGACGACATGTTAATATAGTTTTTCATATCCTTCAGATTATTGACATGCGCCTAATTGATTCCAAAGCTATTATGGGGCCGTGTGGATAG CAAATTGGGTTAATCAGGAAACTCCATTTTCCGTTTGGGAAAGAGGAAACTTCGGCCGCCTCTCTCAGCCACTCGTCGGCCCCTCTCTTAAACCTCACACACCCGAACTCTCTCCCAAAACCTCTGTATTCCTCCTCTTCTTCCGCCACCGTCCTCTTTGGATTCGACAGCTTACGACCACACCTCTGAAACTCGGAAGTAGAAATGGCGGGAAAATCCGGTAAAGGGAGGAATAGGAAAGGGGCGCACCATGCTACAAATAATTCTGAGGCACTAGTTTCTTCTGCTGCTTCAAAAGATGTTAATAATGGTGCTTTGGAGTCGAAAGCAGAGCCTGTTGAATCAGTCGAGGAATCGTCAGATATTAAGGCAGACATCAAAGAATCTGAAACAGCTGCTCCAGAAAGTCAGCCAAAGCAAGGTGAACTTCATCTTTATCCGCTATGTGTCAAAACACAAAGCGGCGAAAAGCTTGAATTGCAAATTATTGACATGCGCCTAATTGATTCCAAAGCTATTATGGGGCCGTGTGGATAG ATGGCGGGAAAATCCGGTAAAGGGAGGAATAGGAAAGGGGCGCACCATGCTACAAATAATTCTGAGGCACTAGTTTCTTCTGCTGCTTCAAAAGATGTTAATAATGGTGCTTTGGAGTCGAAAGCAGAGCCTGTTGAATCAGTCGAGGAATCGTCAGATATTAAGGCAGACATCAAAGAATCTGAAACAGCTGCTCCAGAAAGTCAGCCAAAGCAAGGTGAACTTCATCTTTATCCGCTATGTGTCAAAACACAAAGCGGCGAAAAGCTTGAATTGCAAATTATTGACATGCGCCTAATTGATTCCAAAGCTATTATGGGGCCGTGTGGATAG MAGKSGKGRNRKGAHHATNNSEALVSSAASKDVNNGALESKAEPVESVEESSDIKADIKESETAAPESQPKQGELHLYPLCVKTQSGEKLELQIIDMRLIDSKAIMGPCG
BLAST of CmaCh01G002130.1 vs. TrEMBL
Match: A0A0A0L9W0_CUCSA (Clustered mitochondria protein homolog OS=Cucumis sativus GN=Csa_3G698540 PE=3 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.6e-30 Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. TrEMBL
Match: M5X9G4_PRUPE (Clustered mitochondria protein homolog OS=Prunus persica GN=PRUPE_ppa000213mg PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 6.2e-16 Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. TrEMBL
Match: A0A103Y157_CYNCS (Clustered mitochondria protein homolog OS=Cynara cardunculus var. scolymus GN=Ccrd_021108 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.9e-13 Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. TrEMBL
Match: D7T2X0_VITVI (Clustered mitochondria protein homolog OS=Vitis vinifera GN=VIT_13s0064g01350 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.7e-13 Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. TrEMBL
Match: A0A067L4N6_JATCU (Clustered mitochondria protein homolog OS=Jatropha curcas GN=JCGZ_16718 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 6.4e-13 Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. TAIR10
Match: AT3G52140.4 (AT3G52140.4 tetratricopeptide repeat (TPR)-containing protein) HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06 Identity = 45/124 (36.29%), Postives = 58/124 (46.77%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. NCBI nr
Match: gi|659123676|ref|XP_008461782.1| (PREDICTED: clustered mitochondria protein isoform X2 [Cucumis melo]) HSP 1 Score: 141.4 bits (355), Expect = 9.7e-31 Identity = 79/94 (84.04%), Postives = 84/94 (89.36%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. NCBI nr
Match: gi|659123674|ref|XP_008461781.1| (PREDICTED: clustered mitochondria protein isoform X1 [Cucumis melo]) HSP 1 Score: 141.4 bits (355), Expect = 9.7e-31 Identity = 79/94 (84.04%), Postives = 84/94 (89.36%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. NCBI nr
Match: gi|778682835|ref|XP_011651791.1| (PREDICTED: clustered mitochondria protein [Cucumis sativus]) HSP 1 Score: 139.4 bits (350), Expect = 3.7e-30 Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. NCBI nr
Match: gi|645250718|ref|XP_008231340.1| (PREDICTED: clustered mitochondria protein [Prunus mume]) HSP 1 Score: 92.8 bits (229), Expect = 4.0e-16 Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 1
BLAST of CmaCh01G002130.1 vs. NCBI nr
Match: gi|596055817|ref|XP_007220917.1| (hypothetical protein PRUPE_ppa000213mg [Prunus persica]) HSP 1 Score: 91.7 bits (226), Expect = 8.8e-16 Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
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