CmaCh01G002060.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCCTATTTTGGAAATTGACGCCGGCGAGTTCTTCGTCAAAATCGCCATGTTCCTCTTAGTTCAACTTCTTGTTTATTTTATCCTCTCCGAATCCTCTGATCTCTTCTCTAAGGACCAGAAATTGAAATCTCTCAGCTTCAAACCGGCGAGATCCGTCAGTATTCGCCGGTTGTTAGCAGCCCTTTCCGACATGCCTTCCGGCGGCGAGCTGTCACCGTCGCCGAGAGTTCAGACTCCGTCGTCTATTCACCGGGAGCGTTCCGATAACGGCGGCAGGTTTTAG ATGATGCCTATTTTGGAAATTGACGCCGGCGAGTTCTTCGTCAAAATCGCCATGTTCCTCTTAGTTCAACTTCTTGTTTATTTTATCCTCTCCGAATCCTCTGATCTCTTCTCTAAGGACCAGAAATTGAAATCTCTCAGCTTCAAACCGGCGAGATCCGTCAGTATTCGCCGGTTGTTAGCAGCCCTTTCCGACATGCCTTCCGGCGGCGAGCTGTCACCGTCGCCGAGAGTTCAGACTCCGTCGTCTATTCACCGGGAGCGTTCCGATAACGGCGGCAGGTTTTAG ATGATGCCTATTTTGGAAATTGACGCCGGCGAGTTCTTCGTCAAAATCGCCATGTTCCTCTTAGTTCAACTTCTTGTTTATTTTATCCTCTCCGAATCCTCTGATCTCTTCTCTAAGGACCAGAAATTGAAATCTCTCAGCTTCAAACCGGCGAGATCCGTCAGTATTCGCCGGTTGTTAGCAGCCCTTTCCGACATGCCTTCCGGCGGCGAGCTGTCACCGTCGCCGAGAGTTCAGACTCCGTCGTCTATTCACCGGGAGCGTTCCGATAACGGCGGCAGGTTTTAG MMPILEIDAGEFFVKIAMFLLVQLLVYFILSESSDLFSKDQKLKSLSFKPARSVSIRRLLAALSDMPSGGELSPSPRVQTPSSIHRERSDNGGRF
BLAST of CmaCh01G002060.1 vs. TrEMBL
Match: A0A059D9L9_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_B03635 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.0e-15 Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. TrEMBL
Match: M5X895_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013922mg PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.2e-14 Identity = 48/75 (64.00%), Postives = 61/75 (81.33%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. TrEMBL
Match: B9REM2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1775700 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 3.8e-14 Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. TrEMBL
Match: A0A059D594_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_B02611 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-13 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. TrEMBL
Match: A0A124SEI9_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021506 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.2e-13 Identity = 43/72 (59.72%), Postives = 56/72 (77.78%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. TAIR10
Match: AT2G31945.1 (AT2G31945.1 unknown protein) HSP 1 Score: 67.8 bits (164), Expect = 4.2e-12 Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. TAIR10
Match: AT1G05575.1 (AT1G05575.1 unknown protein) HSP 1 Score: 67.4 bits (163), Expect = 5.4e-12 Identity = 36/63 (57.14%), Postives = 51/63 (80.95%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. NCBI nr
Match: gi|778682889|ref|XP_011651805.1| (PREDICTED: uncharacterized protein LOC105434941 [Cucumis sativus]) HSP 1 Score: 129.8 bits (325), Expect = 2.5e-27 Identity = 68/94 (72.34%), Postives = 80/94 (85.11%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. NCBI nr
Match: gi|659123611|ref|XP_008461750.1| (PREDICTED: uncharacterized protein LOC103500281 [Cucumis melo]) HSP 1 Score: 115.5 bits (288), Expect = 4.9e-23 Identity = 66/92 (71.74%), Postives = 74/92 (80.43%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. NCBI nr
Match: gi|629122616|gb|KCW87106.1| (hypothetical protein EUGRSUZ_B03635, partial [Eucalyptus grandis]) HSP 1 Score: 89.7 bits (221), Expect = 2.9e-15 Identity = 52/91 (57.14%), Postives = 64/91 (70.33%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. NCBI nr
Match: gi|1009105980|ref|XP_015901100.1| (PREDICTED: uncharacterized protein LOC107434156 [Ziziphus jujuba]) HSP 1 Score: 87.4 bits (215), Expect = 1.4e-14 Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 1
BLAST of CmaCh01G002060.1 vs. NCBI nr
Match: gi|802795800|ref|XP_012092598.1| (PREDICTED: uncharacterized protein LOC105650327 [Jatropha curcas]) HSP 1 Score: 87.0 bits (214), Expect = 1.9e-14 Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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