CmaCh20G008640 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGTTTGTGCCTCATCACAGCACTCAAGCCCTAGCCTCACGACCTGGCATTTCACAGCGAAAATCATTCATATAGATGGCAGGCTACAAGAATTGAGGCACCCAGTCAAGGCCAGCCACATTCTCAATCAAAACCCTAATTGTTTCCTCTGTAGTTCAGAATCTATGAAGATCAATTCAATCGTTCCACAAATTTCCAGCGACAGAGAGCTCGAATTGGGGGAAATTTACTTTCTAATCCCGCTTGCTAAATCCGATCTGCCGATTTCTCTCACAATCTTGTGTGCTTTGGCTGCCAAAGCAAATGTAGCCCTCACCAGCTCCAAGAAGGCGTATCCGTCCATGAAAGCGGCGCCGGCCGCCGTAGGGTACCGCATCAGAGCACCAGGGACGTCGTACTGA ATGGGGGTTTGTGCCTCATCACAGCACTCAAGCCCTAGCCTCACGACCTGGCATTTCACAGCGAAAATCATTCATATAGATGGCAGGCTACAAGAATTGAGGCACCCAGTCAAGGCCAGCCACATTCTCAATCAAAACCCTAATTGTTTCCTCTGTAGTTCAGAATCTATGAAGATCAATTCAATCGTTCCACAAATTTCCAGCGACAGAGAGCTCGAATTGGGGGAAATTTACTTTCTAATCCCGCTTGCTAAATCCGATCTGCCGATTTCTCTCACAATCTTGTGTGCTTTGGCTGCCAAAGCAAATGTAGCCCTCACCAGCTCCAAGAAGGCGTATCCGTCCATGAAAGCGGCGCCGGCCGCCGTAGGGTACCGCATCAGAGCACCAGGGACGTCGTACTGA ATGGGGGTTTGTGCCTCATCACAGCACTCAAGCCCTAGCCTCACGACCTGGCATTTCACAGCGAAAATCATTCATATAGATGGCAGGCTACAAGAATTGAGGCACCCAGTCAAGGCCAGCCACATTCTCAATCAAAACCCTAATTGTTTCCTCTGTAGTTCAGAATCTATGAAGATCAATTCAATCGTTCCACAAATTTCCAGCGACAGAGAGCTCGAATTGGGGGAAATTTACTTTCTAATCCCGCTTGCTAAATCCGATCTGCCGATTTCTCTCACAATCTTGTGTGCTTTGGCTGCCAAAGCAAATGTAGCCCTCACCAGCTCCAAGAAGGCGTATCCGTCCATGAAAGCGGCGCCGGCCGCCGTAGGGTACCGCATCAGAGCACCAGGGACGTCGTACTGA MGVCASSQHSSPSLTTWHFTAKIIHIDGRLQELRHPVKASHILNQNPNCFLCSSESMKINSIVPQISSDRELELGEIYFLIPLAKSDLPISLTILCALAAKANVALTSSKKAYPSMKAAPAAVGYRIRAPGTSY
BLAST of CmaCh20G008640 vs. TrEMBL
Match: A0A0A0LIX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G239380 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 3.6e-50 Identity = 110/133 (82.71%), Postives = 114/133 (85.71%), Query Frame = 1
BLAST of CmaCh20G008640 vs. TrEMBL
Match: F6HQJ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01950 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.2e-26 Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = 1
BLAST of CmaCh20G008640 vs. TrEMBL
Match: B9HRT2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s11380g PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 2.7e-26 Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 1
BLAST of CmaCh20G008640 vs. TrEMBL
Match: W9RBP1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026971 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.2e-25 Identity = 60/115 (52.17%), Postives = 85/115 (73.91%), Query Frame = 1
BLAST of CmaCh20G008640 vs. TrEMBL
Match: B9RZE0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0938490 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 8.8e-25 Identity = 63/121 (52.07%), Postives = 84/121 (69.42%), Query Frame = 1
BLAST of CmaCh20G008640 vs. TAIR10
Match: AT2G23690.1 (AT2G23690.1 unknown protein) HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16 Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 1
BLAST of CmaCh20G008640 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein) HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 1
BLAST of CmaCh20G008640 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein) HSP 1 Score: 75.9 bits (185), Expect = 2.2e-14 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 1
BLAST of CmaCh20G008640 vs. TAIR10
Match: AT3G50800.1 (AT3G50800.1 unknown protein) HSP 1 Score: 71.2 bits (173), Expect = 5.3e-13 Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 1
BLAST of CmaCh20G008640 vs. TAIR10
Match: AT1G76600.1 (AT1G76600.1 unknown protein) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11 Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = 1
BLAST of CmaCh20G008640 vs. NCBI nr
Match: gi|778669274|ref|XP_011649227.1| (PREDICTED: uncharacterized protein LOC101205353 [Cucumis sativus]) HSP 1 Score: 205.7 bits (522), Expect = 5.1e-50 Identity = 110/133 (82.71%), Postives = 114/133 (85.71%), Query Frame = 1
BLAST of CmaCh20G008640 vs. NCBI nr
Match: gi|359475255|ref|XP_003631624.1| (PREDICTED: uncharacterized protein LOC100855234 [Vitis vinifera]) HSP 1 Score: 127.5 bits (319), Expect = 1.8e-26 Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = 1
BLAST of CmaCh20G008640 vs. NCBI nr
Match: gi|224105459|ref|XP_002313818.1| (hypothetical protein POPTR_0009s11380g [Populus trichocarpa]) HSP 1 Score: 126.3 bits (316), Expect = 3.9e-26 Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 1
BLAST of CmaCh20G008640 vs. NCBI nr
Match: gi|703097883|ref|XP_010096234.1| (hypothetical protein L484_026971 [Morus notabilis]) HSP 1 Score: 122.1 bits (305), Expect = 7.4e-25 Identity = 60/115 (52.17%), Postives = 85/115 (73.91%), Query Frame = 1
BLAST of CmaCh20G008640 vs. NCBI nr
Match: gi|223541772|gb|EEF43320.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 121.3 bits (303), Expect = 1.3e-24 Identity = 63/121 (52.07%), Postives = 84/121 (69.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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