CmaCh19G004010 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G004010
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transcription factor IIIB 90 kDa subunit
Location	Cma_Chr19 : 4790085 .. 4794709 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCAGAATGTAAATGTAAACGAAGCAAAATCATCTTAATTCTTAAACCCCAGCTCGATGAAGCTGTATATAAGCTTGGAAGCAAATCGCCAAGAGAAGGGAAAGAATGAGAGTCTCGGCACCACTGTGTTGGTTCCAAATGGATTGATGGTTTTAACCCATTTGCGAAATTCAGTTTCTAAATGGGTTGTGAATTTCCCTTCGATTCGACCCACCTGAGTTACAGATTGGATCCTACTTGACTCTGCAGGGAGGGATTTGAATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGTACTTGGCGTTGGATCTTTCGATTTTGCTTCCGTTTTCTTCTGAATATGCAGTTTATATTCCTGGGTTTTTGCTCTTTCATGGTGTTCTTGGCTTTGGAAGGATGGAATTGGTTATCATGTACACTGAAATTAGGACCCAATGAGGGAAAATGCACAATTCTCTGCCATTTTGTGCTGGGAAATGAGAAATTATTCCTGTTTGAACAACTTTCAATTTGAATGATTGAGGAACAGAGATGAGTGAAATGTAGTCAGCTGTTCTTCAGCTGTGAAAATATTGAATCCATTAACATGATCTTTTGGTCGAAAATATAATACCTAGAGATTAGCTACATACGGTATACTTCTCCAGGGTTTGAAACCAAACTTCTTCTTAGGAAGATAGATGGATCGATTCAGGTGAAATTCAATGTAGATCCAACTTTCTATTCACTCGTGGGAACCAAGCGGTTTGAGGGACTACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCTCTTATCAGTATAAGGACAACTTCGGGTTGCCACGATAGAAAATGTATCTTCTTAATCATTCTCAGGATATACTTTTGTTGGTTCTATCAATATATTTCTTAAGGTTACTTTCTTGGTCATTAGGTTAACTTGTCCTGTCTTTATAGTGAAGTTACGAATATGAGTTTCTTTCTAAATGCAACTTTCATTATCATTACCCACTTAAAAATGAATAAGCCATACATTTGGAAGTAATGGTTTCCCACTTTGCTTGGCATTTCCTTTTCTTCATCCTTCTTCTAGTTATCTAAAATTTGGAGAAATGGGTTTCAAGGGGTTATCTTTTGTTCGGAGGACGAGACAAATTACTTATGGTCGAGTTTAGGGACAACTTAACTTGTATGGTTTGGATCGAAAAAGCGAGATGGATTGAGTTCGGTTTCTTGGAATCTTCAGAGCAATGAAATTCTGATCAAACCTTCATTTTGATCAGAATTTCATTGTCATTATGTGGATATTCAAGTGTTCGTGTGTAAGGGGCTATGTTTATGTGTGTTCAAAACTTTCTAACTTGTTTGCGAACAAATGTTATATGTTGTAATGGTGTTTTACCCTTTGCCAGGCGGAGGAAAGAAAAGCTACCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGTAAGTTTTATTCTCTTACTTCAATTCCATAGAATGTTTCGTTCTCCTCTCTAATCGATGTAGGATCTCACAATCCACTCCCTTTGGGGTCCAACGTCCTCGCTAGTACTCGTTTCCCTCTCCAATCAATGTGGGACCCCAATCCACCCTCCCTTTAGGGCCTTGGTGTCCATCTCCCTTCGGGGTTCAGCCTCCTCACTGACACATCGCTCGGTGTCTGGTTCTGATACCATTTATAATAGTCTAAGTCCACCGCTAACGTGTCCTCTTTGGGTTTTTCTTTCGAGTTTCCCTCAAAGTTTTTAAAACGCATCTGTTAGAGAGAGGTTTCCACACCCTTATAAAAAATGTTTCGTCCCTCTCTCCAATCGATGTGCAATAGTATGGTCCTAATATTTCTCGTCACACAAAAGCACACACAAAAAGAAGAAACTTACACATATACAAGAAATGCAGATTGGGAGATTGACCTTTACTTTCTATAAGACATGGGGATTAATGTATTCAACTGTATTAGCATACTAACTTGAGTTATTTCTAGTTTCGATTAGTTAATAATGCTATGCGTTACTGTTTACGAGCACGAAAGTTAGTAGTATATCCAGTAGTCACGTGGGATAGAAGTTGTCATTGGGAGGGTTGTTAACAGGCAGCCTAAACATGGGAAGATGAGTGTACGAGAGGTGCCGGGTCCTCGAGAGGCGCAATCATCTTTCTTATTATCTTTTTCTTTACCAGCAATATACAACAATTCCTATGACAAAACTTTGTACAATATATGCAGGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGGCATTAATGAAAGTACAACTTGAAGGAGAAGAGAGAACTATGAAGAACATGGTTAAAGTGATGCAGCAGCAGGCTTTGTTTGAAAACGCTGAGGCAGGTACTCAAAAAACTCATTTGAGCTGATTCTGTGAGAAGTTACTGATGATTCGATTAGATTAATAATGTCTGTTCTTGTGCAATTTTTGTGCCACCAATTGTCTTGAATACACTTCACTCTATAGTTATGATTACAGAGGCACTGTTGATTATATCTGGTTTATTGTATGATGATTTCTTGTGACTGTGTTTCATGAGAGGTGCTTATTAACAACACTGAATCCATAAACTTTACAAAACCTTTCCCCCCAAATAATTGGGTTATGGGTTATGCTCATAGCTCGCTCCCACTAGTTCTGTAACCACCCCAAGCCCACCGCTAGTAAATATTGTCCTCTTTGAGCTTTTCCTTCTGACATTCCCCTCAAGGTTTTAAAACACGTATGCTAGGGAGAGGTTTCCACACCCTAAGGAATGCTTTATTCCCCTCTCCAACCGACGTGGGATCTCATAAGGCTATGCGGCACCCCTCTTATGAAAAGGGCTGCTGCTTGTTGTTTGCTAGATTTTGTTCTATTTTATGGTGTTTGGAGAGAGAAACAATAGAATTTTGGCATTGAGATGTGATCCTTTGTTAGAGTTTGTACCTCTCGTGGGCTTCCGTGTGTAAAGCTTTTCGTAATTACCTTTTTAGTCTTAGTTTGCTTGATTGAGACCCTTTCTAAGTTTATTGGGTTCGTTTTGGAGGTTAGTTTTTGTAACAGTCCAAGCCCACTGCTAGTAGATATTGTCCTTTTTTAGTTTTCCCTGTCAGATTTTCTCTAAAGGTTTTTAAAATGGGTCTACTACGGAATGGTTTCCACACCCTTATAAAGAATGCTTTGTTCCCCTCTCTAATTGATGTGGAATCTCACAATTCACCTTCTTTTGGGTCCAACGTCTCGTTGGCACCCGTTCCTCTCTTCAATTGATGTGGGATCTCACAATCCACCCCCCTTTGGGGTTCAGCGTCCTCGTTGTCACACCGCTCAATGTGTGGCTCTAATACCATTTGTAACAGCCAGTAGATATTGTCCTTTCTGGGCTTTCCCTTCCAAACTTTCCCTCAAACGCGTATGCTAGGGAGATGGTTTCACACCCTTATAAGGAATGATTCGTTCCTCTCTCCAACCGATGTAGGATCTCACAGTTTTTTTTTACTATTCCACTCGTATTCTTTCGTTTGTTCTTAACGTGAGCTTAGTTTTGGAGGATGTCTTCAAATATTCTAAACCCTCACCTCACCATCAAATCCATCTTTAGAAGTAGACTTTATTAGGGATTGGTGCAAGAATTAAATGAGTTTCATCTCACAATCTGATAATACATCCAATTTTGTGACATATAGATTCAGATCGAACTAATCCCAAGAACTCTTATCCTTGAATTGTTCATCTTTTGTAACAGTTCAGACTCACCGCTAGCAAAATTCTTATCCTTAAATTGATCATCTTTTGTAACAACTCAAACCCACTATTAGTCGATATGTATTATCGTCAGCTTCACGATTTTAAAATACATCTACTAGGGAAAATTTTCCACATCTTTATAAATAAATTCACATCTCTAACCGACGTAAGATCTCAGATCTTTATCCTAAAAATTCGTGATGAGAACGAGGTTTCCCAAGGAGGACTTGACCCATTCATCAATGTTTTTTGTTTGTTGTTAATGACCACATCTTGAATTTTGGAAGGTAGACCAATTTGATTCTTTAAATTCAAGTTCTTGACTTTTCTTGTAAGAATATTGATGCCCCCTTCTTCCTGTTCAACATTTAAATATGAACACATGATTCATCAAATTAAGGTTGCCCCAATTTCAAATGGATGAGGTTACATGCCATTTTTTTTGGAAAGATTGATGTTTACTTGAAAATCACATTGACCGTCAATTTGTTCGTGCATTGTTTGAGATTACCAATGTCTTTATCAATCGAGATTTATACAGGTCGATGAAACAGTGAAGAATCGTGCATATACGTGAAAGCAAGGCTTGTTTAGGCTATGTTTATAAATAATTTGTTAAATCAATGATGGTCGAGGTGACATTTCAACTTACAAATCTCGACTAGCTAAATCCTTAGTTCTTGGCATATTTTGTCTTCCAATGAAAAAGACACGTGTAT

mRNA sequence

TTGCAGAATGTAAATGTAAACGAAGCAAAATCATCTTAATTCTTAAACCCCAGCTCGATGAAGCTGTATATAAGCTTGGAAGCAAATCGCCAAGAGAAGGGAAAGAATGAGAGTCTCGGCACCACTGTGTTGGTTCCAAATGGATTGATGGTTTTAACCCATTTGCGAAATTCAGTTTCTAAATGGGTTGTGAATTTCCCTTCGATTCGACCCACCTGAGTTACAGATTGGATCCTACTTGACTCTGCAGGGAGGGATTTGAATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGCTACCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGGCATTAATGAAAGTACAACTTGAAGGAGAAGAGAGAACTATGAAGAACATGGTTAAAGTGATGCAGCAGCAGGCTTTGTTTGAAAACGCTGAGGCAGGTCGATGAAACAGTGAAGAATCGTGCATATACGTGAAAGCAAGGCTTGTTTAGGCTATGTTTATAAATAATTTGTTAAATCAATGATGGTCGAGGTGACATTTCAACTTACAAATCTCGACTAGCTAAATCCTTAGTTCTTGGCATATTTTGTCTTCCAATGAAAAAGACACGTGTAT

Coding sequence (CDS)

ATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGCTACCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGGCATTAATGAAAGTACAACTTGAAGGAGAAGAGAGAACTATGAAGAACATGGTTAAAGTGATGCAGCAGCAGGCTTTGTTTGAAAACGCTGAGGCAGGTCGATGA

Protein sequence

MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFENAEAGR

Homology

[Close]

BLAST of CmaCh19G004010 vs. TrEMBL
Match: A0A0A0LKE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G912930 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-47
Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           MDK+L+FGRRALFYVRVLSGYE+RRIRS R ++ KRLKQAEERK+ IRK+PEQ ILGEVR
Sbjct: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLEGEER M++MVKVMQQQAL E
Sbjct: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120

Query: 121 NAEAGR 127
            AEAG+
Sbjct: 121 KAEAGK 126

[Close]

BLAST of CmaCh19G004010 vs. TrEMBL
Match: A0A059CHJ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02128 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.2e-45
Identity = 98/123 (79.67%), Postives = 115/123 (93.50%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           MDK+LEFGR+ALFYVRVLSGYE+RRIRSFRL+++KRL+QA+ERKAT+RKVPEQ IL EVR
Sbjct: 1   MDKLLEFGRKALFYVRVLSGYEERRIRSFRLQVEKRLQQAQERKATLRKVPEQVILSEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNK+LEETESAIE+YFKPIDK+AEA+MK+QLEGEERTMK MV+ MQ+QAL E
Sbjct: 61  RMVEEMQALNKRLEETESAIEDYFKPIDKQAEAIMKMQLEGEERTMKEMVRTMQRQALLE 120

Query: 121 NAE 124
             +
Sbjct: 121 RED 123

[Close]

BLAST of CmaCh19G004010 vs. TrEMBL
Match: A0A061G494_THECC (Golgin subfamily A member 6-like protein 4, putative OS=Theobroma cacao GN=TCM_015873 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.7e-44
Identity = 98/124 (79.03%), Postives = 114/124 (91.94%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           MDK+ EFGR+ALFYVRVLSGYE+RRIR++RL++++RL QA+ERKA IRK+PEQAIL EVR
Sbjct: 1   MDKLREFGRKALFYVRVLSGYEERRIRNYRLQLERRLLQAQERKAAIRKIPEQAILAEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMV+EMQTLN+KLEETE+AIEEYFKPIDKEAE LMK+QLEGEE+TMK MV  MQQQAL E
Sbjct: 61  RMVDEMQTLNRKLEETEAAIEEYFKPIDKEAEMLMKMQLEGEEKTMKEMVAAMQQQALLE 120

Query: 121 NAEA 125
            AEA
Sbjct: 121 KAEA 124

[Close]

BLAST of CmaCh19G004010 vs. TrEMBL
Match: M5WAZ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012796mg PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.7e-44
Identity = 97/124 (78.23%), Postives = 111/124 (89.52%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           M+K++EFGR+ALFY RVLSGYE+RRIRSFRLE++KRLK+A ERK  IRK+PEQ IL EVR
Sbjct: 1   MNKLIEFGRKALFYARVLSGYEERRIRSFRLEVEKRLKEANERKLAIRKIPEQTILSEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEM+TLN+KLEETE+AIEEYFKPIDKEAE +MK QLEGEERTMK M+K M QQAL E
Sbjct: 61  RMVEEMKTLNRKLEETEAAIEEYFKPIDKEAEMIMKTQLEGEERTMKEMMKAMHQQALLE 120

Query: 121 NAEA 125
            AEA
Sbjct: 121 KAEA 124

[Close]

BLAST of CmaCh19G004010 vs. TrEMBL
Match: A0A067KY79_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03474 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.1e-44
Identity = 96/124 (77.42%), Postives = 115/124 (92.74%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           M+K+LEFGR+ALFYVRVLSGYE+RRIR+FRL++++RL+QAEERKA +RK+PEQAIL EVR
Sbjct: 1   MNKLLEFGRKALFYVRVLSGYEERRIRNFRLQLERRLQQAEERKAALRKIPEQAILSEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQTLNKKLEETE+AIEEYFKPIDKEAE +MK+QLEGE+++MK M+K MQ QA  E
Sbjct: 61  RMVEEMQTLNKKLEETEAAIEEYFKPIDKEAEIIMKMQLEGEDKSMKEMMKAMQTQATLE 120

Query: 121 NAEA 125
            AEA
Sbjct: 121 KAEA 124

[Close]

BLAST of CmaCh19G004010 vs. TAIR10
Match: AT4G17010.1 (AT4G17010.1 unknown protein)

HSP 1 Score: 150.2 bits (378), Expect = 8.5e-37
Identity = 75/124 (60.48%), Postives = 104/124 (83.87%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           M+K+LE+GR+A+FYVRVLSGYE+RRIRS+RL+++KR++QA +RK  I ++PEQ +L EVR
Sbjct: 1   MNKLLEYGRKAMFYVRVLSGYEERRIRSYRLQLEKRIQQANQRKVEINRLPEQIVLSEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNK++E TE+ IE+YFKPIDK A  +M++QLEGE++TM  M+   QQ+A+ +
Sbjct: 61  RMVEEMQNLNKQIENTEAQIEDYFKPIDKHASTIMEIQLEGEKKTMGTMMNATQQEAIRK 120

Query: 121 NAEA 125
             EA
Sbjct: 121 IEEA 124

[Close]

BLAST of CmaCh19G004010 vs. NCBI nr
Match: gi|659131851|ref|XP_008465889.1| (PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 3.7e-50
Identity = 110/126 (87.30%), Postives = 121/126 (96.03%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           MDK+L+FGRRALFY+RVLSGYE+RRIRSFRL + KRLKQAEERKA IRK+PEQAILGEVR
Sbjct: 1   MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQTLNK LEETESAIEEYFKPIDKEAEALMK+QLEGEER+MK+MVKVMQQQALF+
Sbjct: 61  RMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLEGEERSMKDMVKVMQQQALFK 120

Query: 121 NAEAGR 127
            AEAG+
Sbjct: 121 QAEAGK 126

[Close]

BLAST of CmaCh19G004010 vs. NCBI nr
Match: gi|449461267|ref|XP_004148363.1| (PREDICTED: uncharacterized protein LOC101210706 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 2.2e-47
Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           MDK+L+FGRRALFYVRVLSGYE+RRIRS R ++ KRLKQAEERK+ IRK+PEQ ILGEVR
Sbjct: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLEGEER M++MVKVMQQQAL E
Sbjct: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120

Query: 121 NAEAGR 127
            AEAG+
Sbjct: 121 KAEAGK 126

[Close]

BLAST of CmaCh19G004010 vs. NCBI nr
Match: gi|702325842|ref|XP_010053536.1| (PREDICTED: uncharacterized protein LOC104441962 [Eucalyptus grandis])

HSP 1 Score: 188.7 bits (478), Expect = 6.1e-45
Identity = 98/123 (79.67%), Postives = 115/123 (93.50%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           MDK+LEFGR+ALFYVRVLSGYE+RRIRSFRL+++KRL+QA+ERKAT+RKVPEQ IL EVR
Sbjct: 1   MDKLLEFGRKALFYVRVLSGYEERRIRSFRLQVEKRLQQAQERKATLRKVPEQVILSEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNK+LEETESAIE+YFKPIDK+AEA+MK+QLEGEERTMK MV+ MQ+QAL E
Sbjct: 61  RMVEEMQALNKRLEETESAIEDYFKPIDKQAEAIMKMQLEGEERTMKEMVRTMQRQALLE 120

Query: 121 NAE 124
             +
Sbjct: 121 RED 123

[Close]

BLAST of CmaCh19G004010 vs. NCBI nr
Match: gi|1009157332|ref|XP_015896707.1| (PREDICTED: uncharacterized protein LOC107430386 [Ziziphus jujuba])

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-44
Identity = 95/126 (75.40%), Postives = 117/126 (92.86%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           M K+LEFGR+A+FYVRVLSGYE+RRIRSFRL+++KR++QA+ERKA +RK+PEQAIL EVR
Sbjct: 1   MKKLLEFGRKAMFYVRVLSGYEERRIRSFRLQLEKRIQQAQERKAALRKIPEQAILAEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQTLN+KL+ETE+AIEEYFKPIDKEAEA+MK+QLEGEE+TM+ M+K MQQQAL E
Sbjct: 61  RMVEEMQTLNRKLDETEAAIEEYFKPIDKEAEAIMKMQLEGEEKTMREMMKAMQQQALLE 120

Query: 121 NAEAGR 127
             E+ +
Sbjct: 121 KTESNK 126

[Close]

BLAST of CmaCh19G004010 vs. NCBI nr
Match: gi|590676320|ref|XP_007039702.1| (Golgin subfamily A member 6-like protein 4, putative [Theobroma cacao])

HSP 1 Score: 186.0 bits (471), Expect = 3.9e-44
Identity = 98/124 (79.03%), Postives = 114/124 (91.94%), Query Frame = 1


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60
           MDK+ EFGR+ALFYVRVLSGYE+RRIR++RL++++RL QA+ERKA IRK+PEQAIL EVR
Sbjct: 1   MDKLREFGRKALFYVRVLSGYEERRIRNYRLQLERRLLQAQERKAAIRKIPEQAILAEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120
           RMV+EMQTLN+KLEETE+AIEEYFKPIDKEAE LMK+QLEGEE+TMK MV  MQQQAL E
Sbjct: 61  RMVDEMQTLNRKLEETEAAIEEYFKPIDKEAEMLMKMQLEGEEKTMKEMVAAMQQQALLE 120

Query: 121 NAEA 125
            AEA
Sbjct: 121 KAEA 124

The following BLAST results are available for this feature:

BLAST of CmaCh19G004010 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh19G004010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKE0_CUCSA	1.6e-47	82.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G912930 PE=4 SV=1	[more]
A0A059CHJ3_EUCGR	4.2e-45	79.67	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02128 PE=4 SV=1	[more]
A0A061G494_THECC	2.7e-44	79.03	Golgin subfamily A member 6-like protein 4, putative OS=Theobroma cacao GN=TCM_0...	[more]
M5WAZ1_PRUPE	4.7e-44	78.23	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012796mg PE=4 SV=1	[more]
A0A067KY79_JATCU	6.1e-44	77.42	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03474 PE=4 SV=1	[more]

BLAST of CmaCh19G004010 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17010.1	8.5e-37	60.48	unknown protein	[more]

BLAST of CmaCh19G004010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131851\|ref\|XP_008465889.1\|	3.7e-50	87.30	PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo]	[more]
gi\|449461267\|ref\|XP_004148363.1\|	2.2e-47	82.54	PREDICTED: uncharacterized protein LOC101210706 [Cucumis sativus]	[more]
gi\|702325842\|ref\|XP_010053536.1\|	6.1e-45	79.67	PREDICTED: uncharacterized protein LOC104441962 [Eucalyptus grandis]	[more]
gi\|1009157332\|ref\|XP_015896707.1\|	1.8e-44	75.40	PREDICTED: uncharacterized protein LOC107430386 [Ziziphus jujuba]	[more]
gi\|590676320\|ref\|XP_007039702.1\|	3.9e-44	79.03	Golgin subfamily A member 6-like protein 4, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G004010.1	CmaCh19G004010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 30..50 score: -coord: 56..79 scor
None	No IPR available	PANTHER	PTHR35749	FAMILY NOT NAMED	coord: 2..124 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G004010	Cucsa.313760	Cucumber (Gy14) v1	cgycmaB0868
CmaCh19G004010	Cla002813	Watermelon (97103) v1	cmawmB472
CmaCh19G004010	Csa3G912930	Cucumber (Chinese Long) v2	cmacuB511
CmaCh19G004010	MELO3C003333	Melon (DHL92) v3.5.1	cmameB473
CmaCh19G004010	ClCG09G012770	Watermelon (Charleston Gray)	cmawcgB440
CmaCh19G004010	CSPI03G47420	Wild cucumber (PI 183967)	cmacpiB518
CmaCh19G004010	CmoCh19G004080	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G004010	Lsi05G000230	Bottle gourd (USVL1VR-Ls)	cmalsiB490
CmaCh19G004010	Cp4.1LG15g03100	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G004010	Cp4.1LG05g02250	Cucurbita pepo (Zucchini)	cmacpeB544
CmaCh19G004010	MELO3C003333.2	Melon (DHL92) v3.6.1	cmamedB547
CmaCh19G004010	CsaV3_3G049830	Cucumber (Chinese Long) v3	cmacucB0616
CmaCh19G004010	Cla97C09G175510	Watermelon (97103) v2	cmawmbB549
CmaCh19G004010	Bhi05G000423	Wax gourd	cmawgoB0646
CmaCh19G004010	CsGy3G044800	Cucumber (Gy14) v2	cgybcmaB377
CmaCh19G004010	Carg08801	Silver-seed gourd	carcmaB1083
CmaCh19G004010	Carg25082	Silver-seed gourd	carcmaB0294

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G004010	Watermelon (97103) v2	cmawmbB525
CmaCh19G004010	Wax gourd	cmawgoB0636
CmaCh19G004010	Cucurbita maxima (Rimu)	cmacmaB341
CmaCh19G004010	Cucurbita maxima (Rimu)	cmacmaB453
CmaCh19G004010	Cucurbita maxima (Rimu)	cmacmaB461
CmaCh19G004010	Cucumber (Gy14) v1	cgycmaB0892
CmaCh19G004010	Cucurbita moschata (Rifu)	cmacmoB503
CmaCh19G004010	Cucurbita moschata (Rifu)	cmacmoB525
CmaCh19G004010	Cucurbita moschata (Rifu)	cmacmoB533
CmaCh19G004010	Wild cucumber (PI 183967)	cmacpiB521
CmaCh19G004010	Cucumber (Chinese Long) v2	cmacuB514
CmaCh19G004010	Melon (DHL92) v3.5.1	cmameB483
CmaCh19G004010	Watermelon (Charleston Gray)	cmawcgB453
CmaCh19G004010	Bottle gourd (USVL1VR-Ls)	cmalsiB497
CmaCh19G004010	Cucumber (Gy14) v2	cgybcmaB381
CmaCh19G004010	Melon (DHL92) v3.6.1	cmamedB558
CmaCh19G004010	Silver-seed gourd	carcmaB0788
CmaCh19G004010	Cucumber (Chinese Long) v3	cmacucB0620