Carg25082 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25082
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	IIIB transcription factor
Location	Cucurbita_argyrosperma_scaffold_072 : 138475 .. 140891 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCGAAATTCAGTTTGTAAATGGGTTGTGAATTTCCCTTCGATTTGACCCACCTGAGTTACAGATCGGATCCTACTTGAGTTTGCAGGGAGGGATTTGGATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGTACTTGGTGTTGGATCTTTCCATTTTGCTTCTGTTTTCTTCTGATTATGCAGTTTATATTCCTCATTGGGGTTTTTGAAATGATGGAGTTGGTTATCATCTACACTGAAATTAGAACCCAATGAGGGAAAATGCACAGTTCTCTGCCATTTTGTGCTGGGAAATGAGAAATAATTCCTGTTTGAACCACTTTCAATTTGAATGATTGAGGAACAGAGATGAGTGAAATGTAGTCAGCTGTTCTTCAGCTGTGAAAACTGCATTTAGTAAATGTATATTGAATCCTTAACATGACCTTTTGGTAGAAAATATAATTCCTAGCGATTAGCTATATATGGTGTTCTTCTCTTGTTTGAATCAACCAAACTTCTCCTCAGGAGGATAGATGAACCAGGGTTTGAAACCAAACTTCTCCTTAGGAGGAGTATAGATGGGTCGATTTAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCTGAGCGCTTCGGGGACCACCTCATCTCTTTTCTTCTTGAGAATCCATACATCCCTTATCAGTATCTTCTTAACTTGGTTCGATCAATATATTTCTCAAGGTTACTTTCTTGGTCATTGGGTTAACTTGTCCTGTCTTTATAGTGAAGTTACGAATATGAGTTTCTTTCTAAATGCAACTTCATTATCATTACCCACTTAAAAATGAATCAGCCATCCATTTGGAAGTAATGGTTTCCTACTTTGCTTGGTATTTCCTTTTCTTCATCCTTCTTTTGTTGACAAATTACTTTGGTGTTGACAACTTAAGTTGTATGGTTTGGATCAAAAAGGCGAGATGGATTGAGTTCGGTTTCTTGGAATCTTATGGAGGAGCTCTAAAACCATTTGAAGATTGCTGCTGAGTTATTCAAACCTTCATTTTGATCAGAATTTCATCGTCATTATGTGGATATTTAAGTGTTCATGTGTAAGGGGCTATGTTTATGTGTGTTTAAAACTTTCTAACTTGTTTGCGAACAAGCTTTATATGTTGTAATGGTGTTTTACCCTTTGCCAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGTAAGATACTCATTTTTCTTTAGGATGGATTTCATATTAGAAACGTTTCTTCTCCGATTTTCAGCTCCCGGGGAAAATCATGTCGTTGTTTTTATAAGAAAACCATAACAAGATTAGCACGAACACACTAAAGAATGTTTTGTTCCCTTATCCAATCGATGTAGGATTTCACAATCCACCCCCTTCGGGGCCAGCATCCTCGTTGGTACTCGTTTCTCTCTCCAATCGATGTGAGACCCCAATCCATCCTCCTTTAGGGCCTAGCATCCTTGTTGCACACCGCATGGTGTCCATCCCCCTTTGGGGTTCAGCTTCCTCGCTAACACATCGCTCGGTGTCTGGCTCTGATACCATTTATAACAGCCCAAGCCCACCGCTAGCAAATGTTGTCCTCTTTGGGCTTTCGTTTCAAGTTTTCCCTCAATGTTTTTAAAACGCGTCTGTTAGAGAGAGGTTTCCACACCCTTATAAAGAATGTTCCGTTCATCTCTCCAATCGATGTGCAATAGTATGGTCCTAATATTTCTCGTCACACAAAGGCACACACAAAAAGAAGGAACTGACACATATACAAGAAAAGAAATGCAGATCGGGAGATCGACCTTTACTTTCTATAAGACATGGGGATTAATGCATTCAACTGAATTAGCATACTCAAGTTATTTCTAGTTTCGATTAGTTAATAATGCTATGCGTTACCGTTTTATGAGCACGAAAGTTAGTAGTACATCCAGTAGTGATGTGGGATAGAATTTATCATTGGGAGGGTTGTTAATGGGCAGCCTAAACATGGGAAGATGAGTATACGAGAGGTGTCACAGATGGGGCCCTCGAGAGGCACAATCATCTTATTATCTATGACAGAACTTTGTACAATGCAGGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCAGCAGTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTT

mRNA sequence

TTTGCGAAATTCAGTTTGTAAATGGGTTGTGAATTTCCCTTCGATTTGACCCACCTGAGTTACAGATCGGATCCTACTTGAGTTTGCAGGGAGGGATTTGGATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCAGCAGTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTT

Coding sequence (CDS)

ATGGACAAGGTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAACAGCGCCGGATTCGATCCTTTAGGTTGGAGATCCAAAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGTTGCCATAAGAAAGGTACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGCATGGTTGAGGAGATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGAGTCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTAATGAAAGTACAACTGGAAGGAGAAGAGAGAAGTATGAAGAACATGGTTAAAGTGATGCAGCAGCAGTTGTTTGAAAAAGCTGAGGCAGGTAAATTTACCAATACCCTT

Protein sequence

MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVRRMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQLFEKAEAGKFTNTL

Homology

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: XP_022931799.1 (uncharacterized protein LOC111438069 isoform X2 [Cucurbita moschata])

HSP 1 Score: 212.6 bits (540), Expect = 7.9e-52
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVP+QAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPQQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQ-QQLFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPI KEAE LMKVQLEGEERSMKNMVKVMQ Q LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIHKEAEALMKVQLEGEERSMKNMVKVMQPQALFE 120

Query: 121 KAEAGK 126
           KAEAG+
Sbjct: 121 KAEAGR 126

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: XP_022971856.1 (uncharacterized protein LOC111470545 isoform X6 [Cucurbita maxima])

HSP 1 Score: 212.6 bits (540), Expect = 7.9e-52
Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLEGEER+MKNMVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAGK 126
            AEAG+
Sbjct: 121 NAEAGR 126

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: XP_022971855.1 (uncharacterized protein LOC111470545 isoform X5 [Cucurbita maxima])

HSP 1 Score: 212.2 bits (539), Expect = 1.0e-51
Identity = 119/125 (95.20%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLEGEER+MKNMVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEAG 125
            AEAG
Sbjct: 121 NAEAG 125

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: XP_022971857.1 (uncharacterized protein LOC111470545 isoform X7 [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 6.7e-51
Identity = 118/124 (95.16%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERK  IRKVPEQAILGEVR
Sbjct: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKATIRKVPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMKVQLEGEER+MKNMVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKVQLEGEERTMKNMVKVMQQQALFE 120

Query: 121 KAEA 124
            AEA
Sbjct: 121 NAEA 124

[Close]

BLAST of Carg25082 vs. NCBI nr
Match: XP_022131261.1 (uncharacterized protein LOC111004517 [Momordica charantia] >XP_022131262.1 uncharacterized protein LOC111004517 [Momordica charantia])

HSP 1 Score: 209.1 bits (531), Expect = 8.7e-51
Identity = 114/130 (87.69%), Postives = 124/130 (95.38%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDK+LEFGRRALFYVRVLSGYE+RRIRSFRLE++KRLKQAEE+K A+RK+PEQAILGEVR
Sbjct: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETESAIEEYFKPIDKEAE LMK+QLEGEER MK+MVKVMQQQ LFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLEGEERKMKDMVKVMQQQALFE 120

Query: 121 KAEAGKFTNT 130
           KAEAGK T +
Sbjct: 121 KAEAGKVTTS 130

[Close]

BLAST of Carg25082 vs. TAIR10
Match: AT4G17010.1 (unknown protein)

HSP 1 Score: 114.0 bits (284), Expect = 6.9e-26
Identity = 61/122 (50.00%), Postives = 85/122 (69.67%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           M+K+LE+GR+A+FYVRVLSGYE+RRIRS+RL+++KR++QA +RKV I ++PEQ +L EVR
Sbjct: 1   MNKLLEYGRKAMFYVRVLSGYEERRIRSYRLQLEKRIQQANQRKVEINRLPEQIVLSEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQLFEK 120
           RM                     FKPIDK A T+M++QLEGE+++M  M+   QQ+   K
Sbjct: 61  RMXXXXXXXXXXXXXXXXXXXXXFKPIDKHASTIMEIQLEGEKKTMGTMMNATQQEAIRK 120

Query: 121 AE 123
            E
Sbjct: 121 IE 122

[Close]

BLAST of Carg25082 vs. TrEMBL
Match: tr|A0A1S3CPZ1|A0A1S3CPZ1_CUCME (uncharacterized protein LOC103503473 OS=Cucumis melo OX=3656 GN=LOC103503473 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 114/131 (87.02%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDK+L+FGRRALFY+RVLSGYE+RRIRSFRL + KRLKQAEERK AIRK+PEQAILGEVR
Sbjct: 1   MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNK LEETESAIEEYFKPIDKEAE LMK+QLEGEERSMK+MVKVMQQQ LF+
Sbjct: 61  RMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLEGEERSMKDMVKVMQQQALFK 120

Query: 121 KAEAGKFTNTL 131
           +AEAGK TNTL
Sbjct: 121 QAEAGKVTNTL 131

[Close]

BLAST of Carg25082 vs. TrEMBL
Match: tr|A0A0A0LKE0|A0A0A0LKE0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912930 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 108/129 (83.72%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           MDK+L+FGRRALFYVRVLSGYE+RRIRS R ++ KRLKQAEERK AIRK+PEQ ILGEVR
Sbjct: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKEAETLMK+QLEGEER+M++MVKVMQQQ L E
Sbjct: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120

Query: 121 KAEAGKFTN 129
           KAEAGK T+
Sbjct: 121 KAEAGKVTS 129

[Close]

BLAST of Carg25082 vs. TrEMBL
Match: tr|A0A2P4MS41|A0A2P4MS41_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_66454 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 100/129 (77.52%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           M+K+L+FGR+ALFYVRVLSGYE+RRIRSFRLE+++R+KQA+ERK A+RKVPEQAIL EVR
Sbjct: 66  MNKLLDFGRKALFYVRVLSGYEERRIRSFRLELEQRMKQAQERKAALRKVPEQAILAEVR 125

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE +MK+QL+GEE+++K M+K MQQQ L E
Sbjct: 126 RMVEEMQNLNKKLEETEAAIEEYFKPIDKEAEVIMKMQLDGEEKTLKEMMKTMQQQALLE 185

Query: 121 KAEAGKFTN 129
           KAEA K TN
Sbjct: 186 KAEAEKITN 194

[Close]

BLAST of Carg25082 vs. TrEMBL
Match: tr|M5WAZ1|M5WAZ1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G058400 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.6e-43
Identity = 99/128 (77.34%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           M+K++EFGR+ALFY RVLSGYE+RRIRSFRLE++KRLK+A ERK+AIRK+PEQ IL EVR
Sbjct: 1   MNKLIEFGRKALFYARVLSGYEERRIRSFRLEVEKRLKEANERKLAIRKIPEQTILSEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEM+TLN+KLEETE+AIEEYFKPIDKEAE +MK QLEGEER+MK M+K M QQ L E
Sbjct: 61  RMVEEMKTLNRKLEETEAAIEEYFKPIDKEAEMIMKTQLEGEERTMKEMMKAMHQQALLE 120

Query: 121 KAEAGKFT 128
           KAEA K T
Sbjct: 121 KAEAEKTT 128

[Close]

BLAST of Carg25082 vs. TrEMBL
Match: tr|A0A2P5FJA6|A0A2P5FJA6_9ROSA (IIIB transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_064590 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.6e-43
Identity = 97/124 (78.23%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1   MDKVLEFGRRALFYVRVLSGYEQRRIRSFRLEIQKRLKQAEERKVAIRKVPEQAILGEVR 60
           M+K+LEFGR+ALFYVRVLSGYE+RRIR+FRL+++ R+KQAEERK A+RK+PEQAIL EVR
Sbjct: 1   MNKLLEFGRKALFYVRVLSGYEERRIRAFRLQMENRIKQAEERKAALRKIPEQAILAEVR 60

Query: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAETLMKVQLEGEERSMKNMVKVMQQQ-LFE 120
           RMVEEMQTLNKKLEETE+AIE+YFKPIDKEAE++MKVQLEGEE++M+ M+  MQQQ L E
Sbjct: 61  RMVEEMQTLNKKLEETEAAIEDYFKPIDKEAESIMKVQLEGEEKTMREMMTAMQQQALLE 120

Query: 121 KAEA 124
           KAEA
Sbjct: 121 KAEA 124

The following BLAST results are available for this feature:

BLAST of Carg25082 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931799.1	7.9e-52	95.24	uncharacterized protein LOC111438069 isoform X2 [Cucurbita moschata]	[more]
XP_022971856.1	7.9e-52	94.44	uncharacterized protein LOC111470545 isoform X6 [Cucurbita maxima]	[more]
XP_022971855.1	1.0e-51	95.20	uncharacterized protein LOC111470545 isoform X5 [Cucurbita maxima]	[more]
XP_022971857.1	6.7e-51	95.16	uncharacterized protein LOC111470545 isoform X7 [Cucurbita maxima]	[more]
XP_022131261.1	8.7e-51	87.69	uncharacterized protein LOC111004517 [Momordica charantia] >XP_022131262.1 uncha...	[more]

BLAST of Carg25082 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17010.1	6.9e-26	50.00	unknown protein	[more]

BLAST of Carg25082 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25082 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CPZ1\|A0A1S3CPZ1_CUCME	1.3e-50	87.02	uncharacterized protein LOC103503473 OS=Cucumis melo OX=3656 GN=LOC103503473 PE=...	[more]
tr\|A0A0A0LKE0\|A0A0A0LKE0_CUCSA	1.3e-47	83.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G912930 PE=4 SV=1	[more]
tr\|A0A2P4MS41\|A0A2P4MS41_QUESU	1.4e-44	77.52	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_66454 PE=4 SV=1	[more]
tr\|M5WAZ1\|M5WAZ1_PRUPE	2.6e-43	77.34	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G058400 PE=4 SV=1	[more]
tr\|A0A2P5FJA6\|A0A2P5FJA6_9ROSA	7.6e-43	78.23	IIIB transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_064590 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25082-RA	Carg25082-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	COILS	Coil	Coil	coord: 56..79
None	No IPR available	PANTHER	PTHR35749	FAMILY NOT NAMED	coord: 1..123

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25082	Cla002813	Watermelon (97103) v1	carwmB0204
Carg25082	Csa3G912930	Cucumber (Chinese Long) v2	carcuB0241
Carg25082	MELO3C003333	Melon (DHL92) v3.5.1	carmeB0221
Carg25082	ClCG09G012770	Watermelon (Charleston Gray)	carwcgB0210
Carg25082	CSPI03G47420	Wild cucumber (PI 183967)	carcpiB0247
Carg25082	Cucsa.313760	Cucumber (Gy14) v1	carcgyB0259
Carg25082	CmaCh19G004010	Cucurbita maxima (Rimu)	carcmaB0294
Carg25082	CmoCh19G004080	Cucurbita moschata (Rifu)	carcmoB0300
Carg25082	Lsi05G000230	Bottle gourd (USVL1VR-Ls)	carlsiB192
Carg25082	Cp4.1LG15g03100	Cucurbita pepo (Zucchini)	carcpeB0303
Carg25082	Cp4.1LG05g02250	Cucurbita pepo (Zucchini)	carcpeB0305
Carg25082	CsGy3G044800	Cucumber (Gy14) v2	carcgybB0230
Carg25082	MELO3C003333.2	Melon (DHL92) v3.6.1	carmedB0227
Carg25082	CsaV3_3G049830	Cucumber (Chinese Long) v3	carcucB0245
Carg25082	Cla97C09G175510	Watermelon (97103) v2	carwmbB0218
Carg25082	Bhi05G000423	Wax gourd	carwgoB0268

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25082	Carg08801	Silver-seed gourd	carcarB253

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25082	Cucurbita maxima (Rimu)	carcmaB0296