CmaCh18G003980 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAACTCCGGCCAAACGACAGCGTACTCCCCGGAGAGGACCAGGCGTGGCGGAGCTCGAGAAGATTCTGAAGGAGCAACAAGCCCAAGACTCCAACACCCAATTCCCACCCATGTCCCCGCCGTCACCGCCGCCACCTCCCCCGCCATCACATCAATTCCTATCTCCATCACCACCGCTACCTCTAACCCCAATTCCATTCCTACCACCGCGTGAGTTCCCTTCTCGGCCAAATCTCTCGCCGTTCACTACTCTCCGTCCCCGACCTCCGCCACCAAAATCCGACACCCAAATGAATATTTCGCCGCAGTTTTTACCCAATTTCCAATTCTCACCTCCCTCACTCAATCGCCATTTTTACAACAACCCAATGGTAAGACAATATTAAACTCCAAACCCTTTTAATTTTTTCTTCAAAAAATTAGTGTAAATATATTAAAAATTTTCAGGAAAATTTCACTCCTGCCTCCGCCTCATCCTCATCGTGTCCGCCGGCAATGCCACCGCCGCCTAATTGCTTCAATCAAATAGACCTCCGCCTCATCCTCATCGTGTCCGCCGGCAATGCCACCGCCGCCTAA ATGAAGAAAACTCCGGCCAAACGACAGCGTACTCCCCGGAGAGGACCAGGCGTGGCGGAGCTCGAGAAGATTCTGAAGGAGCAACAAGCCCAAGACTCCAACACCCAATTCCCACCCATGTCCCCGCCGTCACCGCCGCCACCTCCCCCGCCATCACATCAATTCCTATCTCCATCACCACCGCTACCTCTAACCCCAATTCCATTCCTACCACCGCGTGAGTTCCCTTCTCGGCCAAATCTCTCGCCGTTCACTACTCTCCGTCCCCGACCTCCGCCACCAAAATCCGACACCCAAATGAATATTTCGCCGCAGTTTTTACCCAATTTCCAATTCTCACCTCCCTCACTCAATCGCCATTTTTACAACAACCCAATGGAAAATTTCACTCCTGCCTCCGCCTCATCCTCATCGTGTCCGCCGGCAATGCCACCGCCGCCTAATTGCTTCAATCAAATAGACCTCCGCCTCATCCTCATCGTGTCCGCCGGCAATGCCACCGCCGCCTAA ATGAAGAAAACTCCGGCCAAACGACAGCGTACTCCCCGGAGAGGACCAGGCGTGGCGGAGCTCGAGAAGATTCTGAAGGAGCAACAAGCCCAAGACTCCAACACCCAATTCCCACCCATGTCCCCGCCGTCACCGCCGCCACCTCCCCCGCCATCACATCAATTCCTATCTCCATCACCACCGCTACCTCTAACCCCAATTCCATTCCTACCACCGCGTGAGTTCCCTTCTCGGCCAAATCTCTCGCCGTTCACTACTCTCCGTCCCCGACCTCCGCCACCAAAATCCGACACCCAAATGAATATTTCGCCGCAGTTTTTACCCAATTTCCAATTCTCACCTCCCTCACTCAATCGCCATTTTTACAACAACCCAATGGAAAATTTCACTCCTGCCTCCGCCTCATCCTCATCGTGTCCGCCGGCAATGCCACCGCCGCCTAATTGCTTCAATCAAATAGACCTCCGCCTCATCCTCATCGTGTCCGCCGGCAATGCCACCGCCGCCTAA MKKTPAKRQRTPRRGPGVAELEKILKEQQAQDSNTQFPPMSPPSPPPPPPPSHQFLSPSPPLPLTPIPFLPPREFPSRPNLSPFTTLRPRPPPPKSDTQMNISPQFLPNFQFSPPSLNRHFYNNPMENFTPASASSSSCPPAMPPPPNCFNQIDLRLILIVSAGNATAA
BLAST of CmaCh18G003980 vs. TrEMBL
Match: A0A0A0LSF6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G077140 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.3e-14 Identity = 74/172 (43.02%), Postives = 90/172 (52.33%), Query Frame = 1
BLAST of CmaCh18G003980 vs. NCBI nr
Match: gi|778664946|ref|XP_011648446.1| (PREDICTED: CREB-regulated transcription coactivator 1-like [Cucumis sativus]) HSP 1 Score: 87.0 bits (214), Expect = 3.3e-14 Identity = 74/172 (43.02%), Postives = 90/172 (52.33%), Query Frame = 1
BLAST of CmaCh18G003980 vs. NCBI nr
Match: gi|700209617|gb|KGN64713.1| (hypothetical protein Csa_1G077140 [Cucumis sativus]) HSP 1 Score: 87.0 bits (214), Expect = 3.3e-14 Identity = 74/172 (43.02%), Postives = 90/172 (52.33%), Query Frame = 1
BLAST of CmaCh18G003980 vs. NCBI nr
Match: gi|659068150|ref|XP_008443003.1| (PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo]) HSP 1 Score: 84.3 bits (207), Expect = 2.2e-13 Identity = 77/177 (43.50%), Postives = 91/177 (51.41%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |