CmaCh15G003720 (gene) Cucurbita maxima (Rimu)

NameCmaCh15G003720
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr15 : 1703517 .. 1704341 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCGCCAATTGCTTCTCCTTGCTCTTGTCTTCGCCGTCGTTGTCGGCATTGTCTCCGCCGCATCACCCAAGGCCGATGACCATAAACCCTCTGACGCCAAATCTGCTGAAAATAAGACTACCGCAGCTGCCGCTCCAACCCCTGCCCATGCTCACAAAGGAGCTGCTTCTTCCCCCAGGGCTGAAGCCGGTGCCCCCGAGGCTGATGTCGGTGCCCCCAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCTAAGGCTTCCAGCCCTGCCGATGGCCCTGCTTCCGGTCCTGCTTCTGGCCCTGCCGGCAATGAGGGTTCTGCCGATTCCCCTGCTGGATCCCCCGAGTCCGATGCTGATGCGTCATCTCCACCTTCCCCAAGCGGACCTGCTGCCGGACCCGTCAGCGAAGACGAAGATATGGCTGATGCACCAAGTGATTCACCCTCTGATTCTCCGCCCAGTGATGCTTCGTTCCAGAAAGTGTCAGCCGCCACCGTTGCCGGGGTTTTGGGCGTTGCTGGATTGTTTGCCTTCTAA

mRNA sequence

ATGGCCCGCCAATTGCTTCTCCTTGCTCTTGTCTTCGCCGTCGTTGTCGGCATTGTCTCCGCCGCATCACCCAAGGCCGATGACCATAAACCCTCTGACGCCAAATCTGCTGAAAATAAGACTACCGCAGCTGCCGCTCCAACCCCTGCCCATGCTCACAAAGGAGCTGCTTCTTCCCCCAGGGCTGAAGCCGGTGCCCCCGAGGCTGATGTCGGTGCCCCCAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCTAAGGCTTCCAGCCCTGCCGATGGCCCTGCTTCCGGTCCTGCTTCTGGCCCTGCCGGCAATGAGGGTTCTGCCGATTCCCCTGCTGGATCCCCCGAGTCCGATGCTGATGCGTCATCTCCACCTTCCCCAAGCGGACCTGCTGCCGGACCCGTCAGCGAAGACGAAGATATGGCTGATGCACCAAGTGATTCACCCTCTGATTCTCCGCCCAGTGATGCTTCGTTCCAGAAAGTGTCAGCCGCCACCGTTGCCGGGGTTTTGGGCGTTGCTGGATTGTTTGCCTTCTAA

Coding sequence (CDS)

ATGGCCCGCCAATTGCTTCTCCTTGCTCTTGTCTTCGCCGTCGTTGTCGGCATTGTCTCCGCCGCATCACCCAAGGCCGATGACCATAAACCCTCTGACGCCAAATCTGCTGAAAATAAGACTACCGCAGCTGCCGCTCCAACCCCTGCCCATGCTCACAAAGGAGCTGCTTCTTCCCCCAGGGCTGAAGCCGGTGCCCCCGAGGCTGATGTCGGTGCCCCCAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCTAAGGCTTCCAGCCCTGCCGATGGCCCTGCTTCCGGTCCTGCTTCTGGCCCTGCCGGCAATGAGGGTTCTGCCGATTCCCCTGCTGGATCCCCCGAGTCCGATGCTGATGCGTCATCTCCACCTTCCCCAAGCGGACCTGCTGCCGGACCCGTCAGCGAAGACGAAGATATGGCTGATGCACCAAGTGATTCACCCTCTGATTCTCCGCCCAGTGATGCTTCGTTCCAGAAAGTGTCAGCCGCCACCGTTGCCGGGGTTTTGGGCGTTGCTGGATTGTTTGCCTTCTAA

Protein sequence

MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSPRAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAPSDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF
BLAST of CmaCh15G003720 vs. TrEMBL
Match: A0A0A0KUB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517830 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.6e-10
Identity = 87/187 (46.52%), Postives = 109/187 (58.29%), Query Frame = 1

Query: 95  PKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKAD 154
           P+   G   A + A  + A +PKA    P   A  P A      A + +P A A AP A 
Sbjct: 75  PRPPCGLVVASSPA-SSPASSPKAADVEPSDGAKTPAA------APSKSPAAAADAPIA- 134

Query: 155 AGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGSAD-SPAGSPESD 214
             A  + AGAPK  A AP A AGAP+A +P  G   GPAS PAG+E S+  +PAG+PE  
Sbjct: 135 --ATPSAAGAPKGAASAPSAKAGAPEADTPVAG---GPASSPAGDESSSTVAPAGAPE-- 194

Query: 215 ADASSPPSPSGPAAGPVSED------EDMADAPSDSPSDSPPSDASFQKVSAATVAGVLG 274
           AD SSPPSP+GPAAGP S+       +  AD+P+D+PSDSP +  S  KVS A VAG+ G
Sbjct: 195 ADVSSPPSPTGPAAGPTSDAVADAPADSSADSPADTPSDSPANGGSLVKVSVAAVAGISG 246

BLAST of CmaCh15G003720 vs. TrEMBL
Match: A0A0D2M181_9CHLO (Uncharacterized protein OS=Monoraphidium neglectum GN=MNEG_10519 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07
Identity = 86/175 (49.14%), Postives = 97/175 (55.43%), Query Frame = 1

Query: 14  VVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSPRAEAGAPEADVGA 73
           +++    AA+ KA       A +A+ K  AAAA  PA A K  A+  +A A A +A    
Sbjct: 109 IILTKAPAAAAKAPAAAADKAPAADAKAPAAAAKAPAAADKAPAADAKATAAADKA---- 168

Query: 74  PKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKAD 133
           P  DA AP A   AP ADA AP ADA AP ADA AP ADA AP ADA AP ADA AP A 
Sbjct: 169 PAGDAKAPAATDKAPAADAKAPAADAKAPAADAKAPAADAKAPAADAKAPAADAKAPAAA 228

Query: 134 AGAPKADAGAPEA--DAGAPKADAGAPKADAGAPKADAGAPEADAG-APKASSPA 186
                A A AP A  D     ADA AP ADA AP A A AP A A  AP A++PA
Sbjct: 229 KAPAAAAAKAPAADDDEEPDAADAKAPAADAKAPAAAAKAPAAAAAKAPAAAAPA 279

BLAST of CmaCh15G003720 vs. TrEMBL
Match: I1GGA9_AMPQE (Uncharacterized protein OS=Amphimedon queenslandica GN=LOC100635508 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07
Identity = 59/121 (48.76%), Postives = 61/121 (50.41%), Query Frame = 1

Query: 60  PRAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPK-----------ADAGAPEADAGA 119
           P A+A  P AD   P ADA  P A+   P ADA  P            ADA  P ADA  
Sbjct: 72  PNADADQPNADTDQPNADADQPNANTDQPNADADLPNTNADANQPNANADADQPNADADQ 131

Query: 120 PKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKAD 170
           P  DA  P ADA  P ADA  P ADA  P ADA  P ADA  P ADA  P ADA  P AD
Sbjct: 132 PNTDANQPNADADQPNADANQPNADANQPNADADQPNADADPPNADADPPNADADQPNAD 191

BLAST of CmaCh15G003720 vs. TrEMBL
Match: C3ZV21_BRAFL (Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_230465 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07
Identity = 51/115 (44.35%), Postives = 61/115 (53.04%), Query Frame = 1

Query: 65  GAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPE 124
           G PE D G P  D G    D G P  D G P+ D G PE D G P+ D G P+ D G PE
Sbjct: 5   GQPETDYGQPDIDDGQTVTDYGQPVTDYGQPETDYGQPETDYGKPETDYGQPETDYGQPE 64

Query: 125 ADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAP 180
            D G P+ D G P+ D G P+ D G  + D G P+ + G P+ D G PE D G P
Sbjct: 65  TDYGKPETDYGQPETDYGQPDTDDGQTETDYGQPETEYGQPETDYGQPETDHGQP 119

BLAST of CmaCh15G003720 vs. TrEMBL
Match: Q03752_9APIC (Circumsporozoite protein OS=Plasmodium yoelii GN=CS PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07
Identity = 79/180 (43.89%), Postives = 85/180 (47.22%), Query Frame = 1

Query: 31  PSDAKSAENKTTAAAAPTPAHAHKGAASSPRAEAGAPEADVGAPKADAGAPEADAGAPKA 90
           P D      K    A P     +K    +  A+  AP AD  AP AD  AP AD  AP A
Sbjct: 128 PKDGNKDAPKEEKKADPPKEAQNKLKQPAAVADPNAPVADPNAPVADPNAPVADPNAPVA 187

Query: 91  DAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGA 150
           D  AP AD  AP AD  AP AD  AP AD  AP AD  AP AD  AP AD  AP AD  A
Sbjct: 188 DPNAPVADPNAPVADPNAPVADPNAPVADPNAPVADPNAPVADPNAPVADPNAPVADPNA 247

Query: 151 PKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGSADSPAGSP 210
           P+AD  AP+AD  AP+AD  AP AD  AP    P   P   P   P         P   P
Sbjct: 248 PRADPNAPRADPNAPRADPNAPRADPNAP-PQQPQPQPQPKPQPKPQPKPQPKPQPQPQP 306

BLAST of CmaCh15G003720 vs. NCBI nr
Match: gi|659118049|ref|XP_008458926.1| (PREDICTED: mucin-1 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 3.5e-13
Identity = 95/181 (52.49%), Postives = 109/181 (60.22%), Query Frame = 1

Query: 101 APEADAGAPKAD-AGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPK 160
           A EA A +P +  A +PKA    P  D   P A      A + AP A A AP A    P 
Sbjct: 22  AAEAPAASPASSPASSPKAADLEPSDDGKTPAA------APSKAPAAAADAPIAVT--PS 81

Query: 161 ADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGS-----ADSPAGSPESDA 220
           A AGAPK  A AP A  GAP+A SP  G   GPAS PAG+E S     A +PAG+P SDA
Sbjct: 82  A-AGAPKGAASAPAAKGGAPEADSPVAG---GPASSPAGDESSSTVAPAGAPAGAPASDA 141

Query: 221 DASSPPSPSGPAAGPVSEDEDMADAPSDSPSDSP-PSDASFQKVSAATVAGVLGVAGLFA 275
           + SSPPSP+GPAAGP S  +  ADAP+DSP+DSP PS  S  KVS A VAG+ GV GLF 
Sbjct: 142 EVSSPPSPTGPAAGPAS--DAAADAPADSPADSPAPSGGSLVKVSVAAVAGISGVVGLFV 188

BLAST of CmaCh15G003720 vs. NCBI nr
Match: gi|762131703|ref|XP_011449024.1| (PREDICTED: probable WRKY transcription factor protein 1 isoform X3 [Crassostrea gigas])

HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10
Identity = 86/198 (43.43%), Postives = 103/198 (52.02%), Query Frame = 1

Query: 28  DHKPSDAKSAENKTTAAAAPTPAHAHKGAASSPRAEAGAPEADVGAPKADAGAPEADAGA 87
           D K  +A SA++       P P+ + + A   P+    AP+AD  APKAD  AP+ D  A
Sbjct: 729 DQKQQNAPSAQSNN-----PAPSQSDQTA---PKGNQTAPKADQTAPKADQTAPKGDQTA 788

Query: 88  PKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEAD 147
           PKAD  APKAD  AP  D  APK D  APKAD  AP+ D  APK D  APK D  AP AD
Sbjct: 789 PKADQAAPKADQTAPTGDQTAPKGDQTAPKADQTAPKGDQTAPKTDQTAPKGDQTAPNAD 848

Query: 148 AGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGSADSPA 207
              PK D  APK D  APK D  AP+ D  APK  + A              +G++    
Sbjct: 849 QTNPKGDQTAPKGDQTAPKGDQTAPKGDQTAPKGDNAAQ-----------KTDGTSQKGV 906

Query: 208 GSPESDADASSPPSPSGP 226
             P S A +S PPS +GP
Sbjct: 909 KRP-STAGSSKPPSTAGP 906

BLAST of CmaCh15G003720 vs. NCBI nr
Match: gi|762131699|ref|XP_011449022.1| (PREDICTED: probable WRKY transcription factor protein 1 isoform X1 [Crassostrea gigas])

HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10
Identity = 86/198 (43.43%), Postives = 103/198 (52.02%), Query Frame = 1

Query: 28  DHKPSDAKSAENKTTAAAAPTPAHAHKGAASSPRAEAGAPEADVGAPKADAGAPEADAGA 87
           D K  +A SA++       P P+ + + A   P+    AP+AD  APKAD  AP+ D  A
Sbjct: 733 DQKQQNAPSAQSNN-----PAPSQSDQTA---PKGNQTAPKADQTAPKADQTAPKGDQTA 792

Query: 88  PKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEAD 147
           PKAD  APKAD  AP  D  APK D  APKAD  AP+ D  APK D  APK D  AP AD
Sbjct: 793 PKADQAAPKADQTAPTGDQTAPKGDQTAPKADQTAPKGDQTAPKTDQTAPKGDQTAPNAD 852

Query: 148 AGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGSADSPA 207
              PK D  APK D  APK D  AP+ D  APK  + A              +G++    
Sbjct: 853 QTNPKGDQTAPKGDQTAPKGDQTAPKGDQTAPKGDNAAQ-----------KTDGTSQKGV 910

Query: 208 GSPESDADASSPPSPSGP 226
             P S A +S PPS +GP
Sbjct: 913 KRP-STAGSSKPPSTAGP 910

BLAST of CmaCh15G003720 vs. NCBI nr
Match: gi|762131701|ref|XP_011449023.1| (PREDICTED: probable WRKY transcription factor protein 1 isoform X2 [Crassostrea gigas])

HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10
Identity = 86/198 (43.43%), Postives = 103/198 (52.02%), Query Frame = 1

Query: 28  DHKPSDAKSAENKTTAAAAPTPAHAHKGAASSPRAEAGAPEADVGAPKADAGAPEADAGA 87
           D K  +A SA++       P P+ + + A   P+    AP+AD  APKAD  AP+ D  A
Sbjct: 732 DQKQQNAPSAQSNN-----PAPSQSDQTA---PKGNQTAPKADQTAPKADQTAPKGDQTA 791

Query: 88  PKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEAD 147
           PKAD  APKAD  AP  D  APK D  APKAD  AP+ D  APK D  APK D  AP AD
Sbjct: 792 PKADQAAPKADQTAPTGDQTAPKGDQTAPKADQTAPKGDQTAPKTDQTAPKGDQTAPNAD 851

Query: 148 AGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGSADSPA 207
              PK D  APK D  APK D  AP+ D  APK  + A              +G++    
Sbjct: 852 QTNPKGDQTAPKGDQTAPKGDQTAPKGDQTAPKGDNAAQ-----------KTDGTSQKGV 909

Query: 208 GSPESDADASSPPSPSGP 226
             P S A +S PPS +GP
Sbjct: 912 KRP-STAGSSKPPSTAGP 909

BLAST of CmaCh15G003720 vs. NCBI nr
Match: gi|762131739|ref|XP_011449043.1| (PREDICTED: doublecortin domain-containing protein 2-like isoform X21 [Crassostrea gigas])

HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10
Identity = 86/198 (43.43%), Postives = 103/198 (52.02%), Query Frame = 1

Query: 28  DHKPSDAKSAENKTTAAAAPTPAHAHKGAASSPRAEAGAPEADVGAPKADAGAPEADAGA 87
           D K  +A SA++       P P+ + + A   P+    AP+AD  APKAD  AP+ D  A
Sbjct: 614 DQKQQNAPSAQSNN-----PAPSQSDQTA---PKGNQTAPKADQTAPKADQTAPKGDQTA 673

Query: 88  PKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEAD 147
           PKAD  APKAD  AP  D  APK D  APKAD  AP+ D  APK D  APK D  AP AD
Sbjct: 674 PKADQAAPKADQTAPTGDQTAPKGDQTAPKADQTAPKGDQTAPKTDQTAPKGDQTAPNAD 733

Query: 148 AGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGSADSPA 207
              PK D  APK D  APK D  AP+ D  APK  + A              +G++    
Sbjct: 734 QTNPKGDQTAPKGDQTAPKGDQTAPKGDQTAPKGDNAAQ-----------KTDGTSQKGV 791

Query: 208 GSPESDADASSPPSPSGP 226
             P S A +S PPS +GP
Sbjct: 794 KRP-STAGSSKPPSTAGP 791

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KUB8_CUCSA5.6e-1046.52Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517830 PE=4 SV=1[more]
A0A0D2M181_9CHLO1.2e-0749.14Uncharacterized protein OS=Monoraphidium neglectum GN=MNEG_10519 PE=4 SV=1[more]
I1GGA9_AMPQE1.5e-0748.76Uncharacterized protein OS=Amphimedon queenslandica GN=LOC100635508 PE=4 SV=1[more]
C3ZV21_BRAFL2.0e-0744.35Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDR... [more]
Q03752_9APIC5.8e-0743.89Circumsporozoite protein OS=Plasmodium yoelii GN=CS PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659118049|ref|XP_008458926.1|3.5e-1352.49PREDICTED: mucin-1 [Cucumis melo][more]
gi|762131703|ref|XP_011449024.1|3.6e-1043.43PREDICTED: probable WRKY transcription factor protein 1 isoform X3 [Crassostrea ... [more]
gi|762131699|ref|XP_011449022.1|3.6e-1043.43PREDICTED: probable WRKY transcription factor protein 1 isoform X1 [Crassostrea ... [more]
gi|762131701|ref|XP_011449023.1|3.6e-1043.43PREDICTED: probable WRKY transcription factor protein 1 isoform X2 [Crassostrea ... [more]
gi|762131739|ref|XP_011449043.1|3.6e-1043.43PREDICTED: doublecortin domain-containing protein 2-like isoform X21 [Crassostre... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G003720.1CmaCh15G003720.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None