CmaCh15G003720.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCCGCCAATTGCTTCTCCTTGCTCTTGTCTTCGCCGTCGTTGTCGGCATTGTCTCCGCCGCATCACCCAAGGCCGATGACCATAAACCCTCTGACGCCAAATCTGCTGAAAATAAGACTACCGCAGCTGCCGCTCCAACCCCTGCCCATGCTCACAAAGGAGCTGCTTCTTCCCCCAGGGCTGAAGCCGGTGCCCCCGAGGCTGATGTCGGTGCCCCCAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCTAAGGCTTCCAGCCCTGCCGATGGCCCTGCTTCCGGTCCTGCTTCTGGCCCTGCCGGCAATGAGGGTTCTGCCGATTCCCCTGCTGGATCCCCCGAGTCCGATGCTGATGCGTCATCTCCACCTTCCCCAAGCGGACCTGCTGCCGGACCCGTCAGCGAAGACGAAGATATGGCTGATGCACCAAGTGATTCACCCTCTGATTCTCCGCCCAGTGATGCTTCGTTCCAGAAAGTGTCAGCCGCCACCGTTGCCGGGGTTTTGGGCGTTGCTGGATTGTTTGCCTTCTAA ATGGCCCGCCAATTGCTTCTCCTTGCTCTTGTCTTCGCCGTCGTTGTCGGCATTGTCTCCGCCGCATCACCCAAGGCCGATGACCATAAACCCTCTGACGCCAAATCTGCTGAAAATAAGACTACCGCAGCTGCCGCTCCAACCCCTGCCCATGCTCACAAAGGAGCTGCTTCTTCCCCCAGGGCTGAAGCCGGTGCCCCCGAGGCTGATGTCGGTGCCCCCAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCTAAGGCTTCCAGCCCTGCCGATGGCCCTGCTTCCGGTCCTGCTTCTGGCCCTGCCGGCAATGAGGGTTCTGCCGATTCCCCTGCTGGATCCCCCGAGTCCGATGCTGATGCGTCATCTCCACCTTCCCCAAGCGGACCTGCTGCCGGACCCGTCAGCGAAGACGAAGATATGGCTGATGCACCAAGTGATTCACCCTCTGATTCTCCGCCCAGTGATGCTTCGTTCCAGAAAGTGTCAGCCGCCACCGTTGCCGGGGTTTTGGGCGTTGCTGGATTGTTTGCCTTCTAA ATGGCCCGCCAATTGCTTCTCCTTGCTCTTGTCTTCGCCGTCGTTGTCGGCATTGTCTCCGCCGCATCACCCAAGGCCGATGACCATAAACCCTCTGACGCCAAATCTGCTGAAAATAAGACTACCGCAGCTGCCGCTCCAACCCCTGCCCATGCTCACAAAGGAGCTGCTTCTTCCCCCAGGGCTGAAGCCGGTGCCCCCGAGGCTGATGTCGGTGCCCCCAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCAAAGGCTGATGCCGGTGCCCCCGAGGCTGATGCCGGTGCCCCTAAGGCTTCCAGCCCTGCCGATGGCCCTGCTTCCGGTCCTGCTTCTGGCCCTGCCGGCAATGAGGGTTCTGCCGATTCCCCTGCTGGATCCCCCGAGTCCGATGCTGATGCGTCATCTCCACCTTCCCCAAGCGGACCTGCTGCCGGACCCGTCAGCGAAGACGAAGATATGGCTGATGCACCAAGTGATTCACCCTCTGATTCTCCGCCCAGTGATGCTTCGTTCCAGAAAGTGTCAGCCGCCACCGTTGCCGGGGTTTTGGGCGTTGCTGGATTGTTTGCCTTCTAA MARQLLLLALVFAVVVGIVSAASPKADDHKPSDAKSAENKTTAAAAPTPAHAHKGAASSPRAEAGAPEADVGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPEADAGAPKADAGAPKADAGAPKADAGAPEADAGAPKASSPADGPASGPASGPAGNEGSADSPAGSPESDADASSPPSPSGPAAGPVSEDEDMADAPSDSPSDSPPSDASFQKVSAATVAGVLGVAGLFAF
BLAST of CmaCh15G003720.1 vs. TrEMBL
Match: A0A0A0KUB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517830 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.6e-10 Identity = 87/187 (46.52%), Postives = 109/187 (58.29%), Query Frame = 1
BLAST of CmaCh15G003720.1 vs. TrEMBL
Match: A0A0D2M181_9CHLO (Uncharacterized protein OS=Monoraphidium neglectum GN=MNEG_10519 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 86/175 (49.14%), Postives = 97/175 (55.43%), Query Frame = 1
BLAST of CmaCh15G003720.1 vs. TrEMBL
Match: I1GGA9_AMPQE (Uncharacterized protein OS=Amphimedon queenslandica GN=LOC100635508 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07 Identity = 59/121 (48.76%), Postives = 61/121 (50.41%), Query Frame = 1
BLAST of CmaCh15G003720.1 vs. TrEMBL
Match: C3ZV21_BRAFL (Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_230465 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07 Identity = 51/115 (44.35%), Postives = 61/115 (53.04%), Query Frame = 1
BLAST of CmaCh15G003720.1 vs. TrEMBL
Match: Q03752_9APIC (Circumsporozoite protein OS=Plasmodium yoelii GN=CS PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07 Identity = 79/180 (43.89%), Postives = 85/180 (47.22%), Query Frame = 1
BLAST of CmaCh15G003720.1 vs. NCBI nr
Match: gi|659118049|ref|XP_008458926.1| (PREDICTED: mucin-1 [Cucumis melo]) HSP 1 Score: 84.3 bits (207), Expect = 3.5e-13 Identity = 95/181 (52.49%), Postives = 109/181 (60.22%), Query Frame = 1
BLAST of CmaCh15G003720.1 vs. NCBI nr
Match: gi|762131703|ref|XP_011449024.1| (PREDICTED: probable WRKY transcription factor protein 1 isoform X3 [Crassostrea gigas]) HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10 Identity = 86/198 (43.43%), Postives = 103/198 (52.02%), Query Frame = 1
BLAST of CmaCh15G003720.1 vs. NCBI nr
Match: gi|762131699|ref|XP_011449022.1| (PREDICTED: probable WRKY transcription factor protein 1 isoform X1 [Crassostrea gigas]) HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10 Identity = 86/198 (43.43%), Postives = 103/198 (52.02%), Query Frame = 1
BLAST of CmaCh15G003720.1 vs. NCBI nr
Match: gi|762131701|ref|XP_011449023.1| (PREDICTED: probable WRKY transcription factor protein 1 isoform X2 [Crassostrea gigas]) HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10 Identity = 86/198 (43.43%), Postives = 103/198 (52.02%), Query Frame = 1
BLAST of CmaCh15G003720.1 vs. NCBI nr
Match: gi|762131739|ref|XP_011449043.1| (PREDICTED: doublecortin domain-containing protein 2-like isoform X21 [Crassostrea gigas]) HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10 Identity = 86/198 (43.43%), Postives = 103/198 (52.02%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
|