CmaCh12G008680 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTCTCGATCTTCAGCTTATTTAGATCCCGAGATGGTAGAAAGAGGCGAGATGAAACGATAGACGATACGAGAAAGGTGTGGCCGAGCGACGAAGACAAAGGCCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAGGCTAAGGCTTACATCGACAAGATCCATACCCAAATCCGCTCCTCTGGAACTGAATGA ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTCTCGATCTTCAGCTTATTTAGATCCCGAGATGGTAGAAAGAGGCGAGATGAAACGATAGACGATACGAGAAAGGTGTGGCCGAGCGACGAAGACAAAGGCCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAGGCTAAGGCTTACATCGACAAGATCCATACCCAAATCCGCTCCTCTGGAACTGAATGA ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTCTCGATCTTCAGCTTATTTAGATCCCGAGATGGTAGAAAGAGGCGAGATGAAACGATAGACGATACGAGAAAGGTGTGGCCGAGCGACGAAGACAAAGGCCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAGGCTAAGGCTTACATCGACAAGATCCATACCCAAATCCGCTCCTCTGGAACTGAATGA MASTNNKRQKPKSPSCFFSIFSLFRSRDGRKRRDETIDDTRKVWPSDEDKGRYWVAEPGIDRKAKAYIDKIHTQIRSSGTE
BLAST of CmaCh12G008680 vs. TrEMBL
Match: A0A0A0LJ24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034820 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.1e-25 Identity = 64/83 (77.11%), Postives = 71/83 (85.54%), Query Frame = 1
BLAST of CmaCh12G008680 vs. TrEMBL
Match: W9R5Q4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022654 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-11 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 1
BLAST of CmaCh12G008680 vs. TrEMBL
Match: V4SLM0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013222mg PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 7.5e-11 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 1
BLAST of CmaCh12G008680 vs. TrEMBL
Match: A0A0A0KAK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014890 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 9.8e-11 Identity = 42/75 (56.00%), Postives = 49/75 (65.33%), Query Frame = 1
BLAST of CmaCh12G008680 vs. TrEMBL
Match: A0A067E306_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040544mg PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 9.8e-11 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 1
BLAST of CmaCh12G008680 vs. TAIR10
Match: AT3G05858.1 (AT3G05858.1 unknown protein) HSP 1 Score: 60.1 bits (144), Expect = 7.4e-10 Identity = 35/59 (59.32%), Postives = 40/59 (67.80%), Query Frame = 1
BLAST of CmaCh12G008680 vs. TAIR10
Match: AT5G26620.1 (AT5G26620.1 unknown protein) HSP 1 Score: 58.2 bits (139), Expect = 2.8e-09 Identity = 32/51 (62.75%), Postives = 34/51 (66.67%), Query Frame = 1
BLAST of CmaCh12G008680 vs. NCBI nr
Match: gi|700205910|gb|KGN61029.1| (hypothetical protein Csa_2G034820 [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 1.5e-25 Identity = 64/83 (77.11%), Postives = 71/83 (85.54%), Query Frame = 1
BLAST of CmaCh12G008680 vs. NCBI nr
Match: gi|659070045|ref|XP_008453122.1| (PREDICTED: uncharacterized protein LOC103493929 [Cucumis melo]) HSP 1 Score: 123.2 bits (308), Expect = 2.0e-25 Identity = 63/80 (78.75%), Postives = 69/80 (86.25%), Query Frame = 1
BLAST of CmaCh12G008680 vs. NCBI nr
Match: gi|703093363|ref|XP_010094905.1| (hypothetical protein L484_022654 [Morus notabilis]) HSP 1 Score: 77.0 bits (188), Expect = 1.7e-11 Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 1
BLAST of CmaCh12G008680 vs. NCBI nr
Match: gi|567871495|ref|XP_006428337.1| (hypothetical protein CICLE_v10013222mg [Citrus clementina]) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-10 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 1
BLAST of CmaCh12G008680 vs. NCBI nr
Match: gi|641826009|gb|KDO45256.1| (hypothetical protein CISIN_1g040544mg [Citrus sinensis]) HSP 1 Score: 73.9 bits (180), Expect = 1.4e-10 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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