CmaCh09G009640 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G009640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cell differentiation protein rcd1, putative
Location	Cma_Chr09 : 4884643 .. 4892089 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATATATGAGTACACGCTCCATCTAGGCCTAGAAACTGACGCCCTCTCAGCTGATAAAGAGAGGAACTTCCTTTCTTCCCTTCGCCGGCGTGAAATCGGAGGAGTCTTGTTGAGACTTGAAGGTTTTTGATTGTCGAAAATGTCGAATCTTCCCCAATCGCACTCCATGAATGCTGCGTTTGGAGGTCCTGGTATCGGTTCGTCGATCCCCAGTGCCTCCGGAGCTGCACCGAACAAGGAGCGAAAAATGGCTTCTTCGGAGCAACTAGTGCTCGACCTCAGCAACCCGGAACTCCGGGAGAACGCTCTCCTTGAACTGTCGAAGGTAAGATTCCTTGACCTTTAAGCAACCAGAGAGGAGGAGGAGGAGAGTGTTGAGGATTGGTGTTTTTTCTTGTTTTGGTGTGATGGTTGTGATAATTAGGGATTGCGGCTGAAAGGATTTGTGTTGGTGTTAGAGAATTTGTAGGTTTTGTTTGGCATGTCAGGAATTTTTAACTTGCTGTGGCTGAGAGGAATTTTCGCGATCGGATGTGTTTATTTGAAATAAAATTATGTTCTTATTGCTGTATAGTTCATCGCAGCTAGGTTGAATGTTGTTTTGATCCTTGCATGTTTAGTGCTACTTTTGTTAATTGTTTTGTATAGAATAGACTGAAATTTTCGCGAACGTCAGGAATTGTTTTGTTAATTGACTATTTTTAGCTCAAGCTAATTACGTAGCGTTCCCCTTCTTCCACTTTTCTCTCAACTTCTTGCTGCAATTTTTTTTTCTATCGCGCTTCGGTCGAAGGGGAACGATCCATCCGTTCCTGCGCCGGTCGAGGGGGAACGATCCCGCGCCGGTCGAGGGGGAACGATCCCGCGCCGGTCGAGGGGGAACGATCCCGCGCCGGTCGAGGGGGAACGATCCCGCGCCGGTCGAGGGGGAACGATCCCACTCCGGTAGAAGGGAACTTATGACATGCAACTGACATGCAACTGAAACGATCCATCCCGCTTCGGTCGAAGGGAGAACAATCCCCCGCCGGTAGTGGGGGAACAATCCCACGACGGTAGAAGGGAACTTATGACATGCAACTGAAACAATCCATTCCCCTACGGGGGAATGATCCCGCGCCGGTAGGGGGAACGATCCCGCGCCAGTAGAAAGGAACATGCAACTGAAACAAGTTCTTGTAAAGGGGAAAAGGTTCGGTAGAAGGGAACTTATGACATGCAACTGAAACAATTCTTGCAAATGGGAAAAGGGCGTAATGTGGGGCTGTTCTTAGGCCCTTCTTATTTTATCCAAAGGGTTTGAATTAGCCCCTGATCGTATTTCTCCCGAGATTAAAGAAAAGATGGGCAATCTGTCTTTCCCCGGACCCTACGACTAAGAAAGATTTCACTTCTTAAAATATCCCATATACATAGGTGGGAACAAGGGAAGGGGTCAGATTTATCCCGATGGGACAAAGCATTGGTAGGGTGGAACTTCTCCCTAGCAGTGCTTGGGATAAGCCCGAAAGAAAACCCCAAAGAGGACAATATCTGTCGATTCTTTGTTAGTGTTCATCATATGGGAATTCTTTTGGTATTATATGTGCAGTTAACCAAGTATATCTGATACCCTAATTTGTTTCTGTTCTTATTTTTCAGAAGAGGGAACTGTTTCAAGACTTGGCTCCATTGTTGTGGAACTCCTTTGGAACCATTGCTGCCTTGTTGCAAGTATGCTGCTTTAATTCTCAAACATACTATGAATTGTCTATAATTCACTCCTAATCTTGTTTTATTTTGTGTTTGTTTGTTTGCTTGTTTTGGGGTGGAACAGGAAATTGTATCAATATATCCTGTTCTGTCTCCCCCTAATCTGACCCCAGCGCAGTCGAATAGAGTTTGCAATGCTCTTGCTCTTCTTCAGGTCACTCCTTGTCGAACTTGTTACATCATGGAATCAAATTATATATGGTTTTGTGCTCACTAGTTACACAATATCTTGTTGATCTGAAACTATAACTTATGCAGTCTATATCTCTTTTTGTATGTTTTTTTTGCAGTGTGTAGCTTCACACCCAGATACGAGGATGTTGTTTCTCAACGGTAATGTTGTTGATCTTGTTAATGTTTGAACACTTTTGCTTGAGACTTTGTTCAAGACACAATCTAACATACTAAATGAAGTGGGCTTGTCGGAAATTTACACTAATTAGTTTGTGTGGAGGAAGCAATGAAACTAGCCATGTGGATCCCAAACACTTTGAAAGACTCTCCATCTCATTTTTTATGAAATAATACTAGAACATAAAATAGAAAGCCATAAAAAGGAGGTAATGTGTAATAGCCTAACCTCACCGTTAGCCGATATTGTCTAGTTTGGCTCGTTATGTATCGTCGTCAGCCTCATGGTTTTAAAAAACGTCTGTTAGGGAGAGGTTTTCATATCAGGTCAACCTAAAACCCGTCTGTTAGGGAGAGGTTTTCATACCAGGTCAACCTAAAATGCGTATGTTAGGAAGAGGTTTCCATATCGGGTCAACCTAAAACACGTCTGTTAAGGAGAGGTTTCCATACCGGGTTAGCTTAAAACGCGTCTGTTAGGGAGAGGTTTCCATACCGGGTTAGCTTAAAACGCGTCTGTTAGGGAGAGGTTTTCGTACCGGGCCAGCCTAAAACACGTCTATTAAGGAGAGGTTTCCACACCCTTGTAAGGGTCAACCTAAAACCCTCACGGTTTTAAAACGCTATAAGGGTCAACCTAAAACCCTCATGGGTTTAAAATGCTACAAGGGTCAACCTAAAACCCTCACAGTTTTAAAATTCGAGGCGTTATATAACCTAACAAAAACATATTTTCCTAAAATTCGGGGCGTTACATAACCTAACAAAAAGGACCTCCACTCTAAAGAAAAAATTAAACCTAACAGGTAATTACAATTATAACTTCTGCATAATCCACCATGGGGCTTCTCAGTTGAATATCTAGCAAAATTTTTGAATGCATATATTAGTTGGGTGCTTAGCAGTTAGCGGTCATAGGATTTTCACGATTTCCTTAAGATGATTGCATAGTTGCCTGTTTGTTTCAAGAATTGATTCATACTGAATTTATCCTCTGCAGCTCACATACCCTTGTATTTGTATCCTTTCCTCAACACGACTAGCAAGTCGAGGCCCTTTGAGTACTTGCGCCTTACTAGCTTGGGTGTCATCGGTGCGCTAGTGAAGGTATGTCACTTTAAAGCATGAGCTTATACTCTCGAGCTTATACTCTCTCCCTGTAATTTTCTTGTAACAGTCCAAGCCCACCGCTAGTCAATATTGTTCTCTTTGGGTTTTCCCTTCTGTGCTTCCCCTCAAGGTTTTTAAAACGCCTTCCTTCTCTTCTCCAACCGATATGGGATCTCACAATCCACCCATTATCGGGGCTCAGCATCCTCGCTGGCATTCATTCCTCTCTCCAATCGATTTGGGATCTCACAGTCCACCCCCCTTTGAGGCCAGCGTCCTCATTGGCACACCGTCTAGTGTTTGACTCTGATACCATTTTTAACTGCCCAAACCCACTGCTAGTAGATATTGTCCTATTTGGCTTTCCCTTCCGGGATTCCCCTCAAAGTTTTTAAAACACCTTTCCTAGGAAGAGGTTTTCACACTCTTATAAAGAATGTTTTGTTCTCCTCCCCAATCGATGTGGGATCTCACAATCCACCCACTATCAGGGTTCAGTGTCCTCGCTGACACTCATTCCTCTTTCTAATCGATATGGGATCTCACAGTCCACCTCCCATCAGGGCCAGTGTCCTCACTGGCACACTGCCCGGTATCTGGTTCTGATACCATTTTTAACAGCCCAAACCCAAATCCACTGTTAGCAGATATGGTCCTCTTTGGGCTTTTCCTCGAAAGGATTTTAAAACGCGTCCCCTAGGGGCGTGGGATCTCACCTTTCTTCTTTTTTTTCTTTTTTTTCCTTTTTATTGGGCACTCTCTATATTGAAAATCTAATAATTTTTGTTTTCCTCCTGTTTTTACCAGGTAGATGATACAGAAGTAATAAGTTTTCTGCTGTCAACTGAAATAATTCCTCTATGCCTGCGTACAATGGAAATGGGAAGCGAGTTGTCAAAAACAGCTGAGTTTCCTGATGCTACTTTTATTTCTATATTTCTCTTTTTAATTTTTCTAGCAATTTTATCTCATTTTATACCTTATTTTATTGGGAATTATCTATTATAAAATCTCAATTGCACATGTCACCAAAAATTAAGGTATGAGGACCCACTCTCAATTTGTGGGCCCTTTCTAAAACTCTGAATTATTAGAAATGAGTTATTCCTTTTGATAGGGTAGGAAACACCCCTCCTGATGTGAGATCCCACGTCGGTTGGAGAGGAGAACAAAACATTCTTTGTAAGGGTGTGAAAACCTCTCTCTAGCAACCTTGAAGGGAAGCCCAAAAGGGAAAACCCAACGAGGAAAATATCTGCTCGGTGGGCTTTGGCCATAACAAATGGTATTAGAGCCAGATACCGAGATGTGCCAACGAGGAGGCTAAACCTTGAAGGGGTTGGACATGAGGTGGTGTGCCAGCAAGGACGCTGGGCCCCGAAGGGGTGTGAATTGGGAGGTCCCACATCGATTGGAGAAGGGAACAAGGGCCGGCTAGGACGTTTGGCTCTGAAGGTGGTGGATTGTGAGATCCCACGTCGATTAGGGAGGAGAAGAGAACAAAACATTCTTTATAAGGACGTGGAAACCTCTCCCAAGAAGGGAAAGCCCAAAGAGGACAATATGTGCTAGCGGTGAGCTTGGGCGGTTGAGTTTTTTTTTTTTTGTGTGAATTGTTTGGCTTAATGTCTTGTAAAAGAGGTTTCCAGCCTCTCAAAATAGGTGGTGGTTTGTGTCTCTTTATTGTGCTGATTGCTTTGTGTCAACAGTGATTTCTAGTTCTGTTTATGTTTGGCACTGTTATTGGCTCTTGCAGGTGAAATATTAGAGGAGACCTTACACTAAATTGACCCACGACTTTGTACTGCAGGTTGCAACATTTATCGTGCAGAAAATTTTACTGGATGATGTCGGGTTGGATTATATTTGTACTACAGCCGAAAGATTTTTCGCTGTTGGTCGAGTTCTGGGAAACATGGTTGCAGCTCTTGCTGAGCAACCTTCGTCTCGTCTCTTGAAGCACATAATTCGATGTTATCTTCGATTGTCCGATAACCCGAAGTGCGTAAAAGTGGATTTGCATTTCAGTTAAGGTATTATTAGCCTTTTCAGTTTCTTTAACGACTTGTTCCGTTGTTCAGAGCTTGCGACGCCTTAAGGAGCTGTCTTCCAGACATGCTGAGAGATTCTACTTTCAATGGCTGTCTTCGGGTAAGTGTCTTTTCGACATGAATTTCATTTGTCGCGCTTCTGTGGAGTTTTCTGTTCTGAGTATGTTTCTAATTCATGTTCAGTGTTTTAGGCTAAGCTGACTATGTTGGCGTTGTACAATGGTTCTGCTAAGAGGAAAATACTGTAAAATTTCCGTGTTTGTTCATAATAGGGGAAAAAAAGAAAAACATTTTGAAAGTTCTAAAACGAAAAGTGTGAGATCTTGCCTCGGTTGAGGAAGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTTCCTAGCAAACACGTTTTCAAATTTTGAGGGAAGCCTAAAAGGGAAAGCCCAAAAAGGACAATATATGCGTGGTGGGCTTGGGTCATTACAAATAGTATTAGAGCTAGACACTAGATGGTATGCTAACGAGGAGGCTGAGTCCCGAAGAGGGTTGTGGCGGTGTGCCAGCAAGAACGTTGGGCTCTGAAGGGGAGTGGATTGGGGGGTCTCACATCGATTGGAGAAGGGAACAAGTCCTGAAGGGGGGGATTGTGAGATCCCACATCGGTTGAGGAAGAGAACGAAACTTCCTTTATAAGGGTATGGAAACCTCTCCCTAGTCAACATGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCCCAAAAAGGACAATATTTACTAGCAGTGGGCTTGGGTCGTTACAAATGGTATTAGAGCCAGACACTAGGCAATGTGCCAATGAGGAGGCTGAGTCCTGAAGGGGGTTGGACATGGGGCGGTGTGCCAACAAGGATGCTGAGCCTCGAAGGGGGATGGATTGGTGGTCCCACATCGATTGGAGAAGGGAATGAGCGCCAGCACCTCGCTGGGCTCCAAGGGGGGTGAATTGTGAGATATTACATTGGTTGAGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCCAACAAACGTGTTTTAAAAACCTTGAGAGGAAGCCCAAAAGGGAAAATCCAAAGTGGACAATATTTGCTAGCGGTGGGCTTATGCCGTTACAAATGATATCAGAGCCAGACACTGGGCGGTGTGCCAGCAAGGACGCTGGGCCCCGATGGGGGGTGGATTTGGAGGTCCTACATCGATTGGAGAAGGGAATGAGTGCCAGTGAAGACGTTAGGTCGCGGATAGGGTGGATTGTGAGATCCCACATCGGTTGAGAAAGAGAACGAAATATCCTTTATAAGGGTGTGGAAACCTCTCCCTAGAAAACACGTTTTAAAAATTTTGAGGGGAAGCCCGAAGAGGATAATATCTGCTAGCAGTGGGTTTGGACCATTACAAAAAGTGTTCTTGAAAATGAGCTTAAAAGCACTCCACTAAGTATCACGATTCTCAAAATCATCATGAACTCGGGTTCACTCTCACTCGGAGCTTCTAATTCATAACAAAAGTATTGGACTTACTGGTATAACTTATTATCAAAACTCATTGATTTTGCATTGTGGATCACTTCCAAAATTTTAACGTTGACAGGATGATCCAACCACTAGGCGGTGGCTTCAACAGTTGCTGCTCAGTGTAGGAATGAGTAGGGTTCCTACACTTCAGGCCGGGGCTGGATTTGATCACATGATGTGAACTAAACCCGTAATGTATGTTCCAAAATTCTCTGTATTAGCATCACCTCAGCATTGCCTAAACTTATTTACGGGTTTGTAATTCTAAAAAACAATCTGCTCGAGTAAACCTTCTCGAGTAAAAGAATTATACACATGTTTATAGCTTTGTCATTAGAACTGCTCTCTGTTTTCTTCGAGTAATCTATTGTGCATCTATGAACCATGTATGTAATTGTAGATCATACAACCACACATTCGATCTAGATGAACACAAAGAATATGAGAGAAAATGTCGGAAGAAATATGGGTGTTTAAGAACATGAGAGAAATGGCAGGAAGGAATATTGGGTAGAATACACTCAGAATGAGAATCTAGAAAATTGGAAATGGATCTTGTCAACAAAGAATTTCATTTTCGAACGAACATCCATATCTTCACTTTTGATGTGTTTTGTCTTTGAATGATAATCCAACGGTATGACACTCTGAC

mRNA sequence

CATATATGAGTACACGCTCCATCTAGGCCTAGAAACTGACGCCCTCTCAGCTGATAAAGAGAGGAACTTCCTTTCTTCCCTTCGCCGGCGTGAAATCGGAGGAGTCTTGTTGAGACTTGAAGGTTTTTGATTGTCGAAAATGTCGAATCTTCCCCAATCGCACTCCATGAATGCTGCGTTTGGAGGTCCTGGTATCGGTTCGTCGATCCCCAGTGCCTCCGGAGCTGCACCGAACAAGGAGCGAAAAATGGCTTCTTCGGAGCAACTAGTGCTCGACCTCAGCAACCCGGAACTCCGGGAGAACGCTCTCCTTGAACTGTCGAAGAAGAGGGAACTGTTTCAAGACTTGGCTCCATTGTTGTGGAACTCCTTTGGAACCATTGCTGCCTTGTTGCAAGAAATTGTATCAATATATCCTGTTCTGTCTCCCCCTAATCTGACCCCAGCGCAGTCGAATAGAGTTTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCTTCACACCCAGATACGAGGATGTTGTTTCTCAACGCTCACATACCCTTGTATTTGTATCCTTTCCTCAACACGACTAGCAAGTCGAGGCCCTTTGAGTACTTGCGCCTTACTAGCTTGGGTGTCATCGGTGCGCTAGTGAAGGTAGATGATACAGAAGTAATAAGTTTTCTGCTGTCAACTGAAATAATTCCTCTATGCCTGCGTACAATGGAAATGGGAAGCGAGTTGTCAAAAACAGTTGCAACATTTATCGTGCAGAAAATTTTACTGGATGATGTCGGGTTGGATTATATTTGTACTACAGCCGAAAGATTTTTCGCTGTTGGTCGAGTTCTGGGAAACATGGTTGCAGCTCTTGCTGAGCAACCTTCGTCTCGTCTCTTGAAGCACATAATTCGATGTTATCTTCGATTGTCCGATAACCCGAAAGCTTGCGACGCCTTAAGGAGCTGTCTTCCAGACATGCTGAGAGATTCTACTTTCAATGGCTGTCTTCGGGATGATCCAACCACTAGGCGGTGGCTTCAACAGTTGCTGCTCAGTGTAGGAATGAGTAGGGTTCCTACACTTCAGGCCGGGGCTGGATTTGATCACATGATGTGAACTAAACCCGTAATGTATGTTCCAAAATTCTCTGTATTAGCATCACCTCAGCATTGCCTAAACTTATTTACGGGTTTGTAATTCTAAAAAACAATCTGCTCGAGTAAACCTTCTCGAGTAAAAGAATTATACACATGTTTATAGCTTTGTCATTAGAACTGCTCTCTGTTTTCTTCGAGTAATCTATTGTGCATCTATGAACCATGTATGTAATTGTAGATCATACAACCACACATTCGATCTAGATGAACACAAAGAATATGAGAGAAAATGTCGGAAGAAATATGGGTGTTTAAGAACATGAGAGAAATGGCAGGAAGGAATATTGGGTAGAATACACTCAGAATGAGAATCTAGAAAATTGGAAATGGATCTTGTCAACAAAGAATTTCATTTTCGAACGAACATCCATATCTTCACTTTTGATGTGTTTTGTCTTTGAATGATAATCCAACGGTATGACACTCTGAC

Coding sequence (CDS)

ATGTCGAATCTTCCCCAATCGCACTCCATGAATGCTGCGTTTGGAGGTCCTGGTATCGGTTCGTCGATCCCCAGTGCCTCCGGAGCTGCACCGAACAAGGAGCGAAAAATGGCTTCTTCGGAGCAACTAGTGCTCGACCTCAGCAACCCGGAACTCCGGGAGAACGCTCTCCTTGAACTGTCGAAGAAGAGGGAACTGTTTCAAGACTTGGCTCCATTGTTGTGGAACTCCTTTGGAACCATTGCTGCCTTGTTGCAAGAAATTGTATCAATATATCCTGTTCTGTCTCCCCCTAATCTGACCCCAGCGCAGTCGAATAGAGTTTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCTTCACACCCAGATACGAGGATGTTGTTTCTCAACGCTCACATACCCTTGTATTTGTATCCTTTCCTCAACACGACTAGCAAGTCGAGGCCCTTTGAGTACTTGCGCCTTACTAGCTTGGGTGTCATCGGTGCGCTAGTGAAGGTAGATGATACAGAAGTAATAAGTTTTCTGCTGTCAACTGAAATAATTCCTCTATGCCTGCGTACAATGGAAATGGGAAGCGAGTTGTCAAAAACAGTTGCAACATTTATCGTGCAGAAAATTTTACTGGATGATGTCGGGTTGGATTATATTTGTACTACAGCCGAAAGATTTTTCGCTGTTGGTCGAGTTCTGGGAAACATGGTTGCAGCTCTTGCTGAGCAACCTTCGTCTCGTCTCTTGAAGCACATAATTCGATGTTATCTTCGATTGTCCGATAACCCGAAAGCTTGCGACGCCTTAAGGAGCTGTCTTCCAGACATGCTGAGAGATTCTACTTTCAATGGCTGTCTTCGGGATGATCCAACCACTAGGCGGTGGCTTCAACAGTTGCTGCTCAGTGTAGGAATGAGTAGGGTTCCTACACTTCAGGCCGGGGCTGGATTTGATCACATGATGTGA

Protein sequence

MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLSVGMSRVPTLQAGAGFDHMM

Homology

[Close]

BLAST of CmaCh09G009640 vs. Swiss-Prot
Match: RCD1_BOVIN (Cell differentiation protein RCD1 homolog OS=Bos taurus GN=RQCD1 PE=2 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.0e-104
Identity = 191/265 (72.08%), Postives = 224/265 (84.53%), Query Frame = 1


Query: 42  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLT 101
           Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT
Sbjct: 24  QWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLT 83

Query: 102 PAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVI 161
             QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVI
Sbjct: 84  AHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVI 143

Query: 162 GALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTA 221
           GALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T 
Sbjct: 144 GALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTY 203

Query: 222 ERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFN 281
           ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D+TF 
Sbjct: 204 ERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFA 263

Query: 282 GCLRDDPTTRRWLQQLLLSVGMSRV 307
             L+DD TT+RWL QL+ ++   +V
Sbjct: 264 QVLKDDTTTKRWLAQLVKNLQEGQV 288

[Close]

BLAST of CmaCh09G009640 vs. Swiss-Prot
Match: RCD1_HUMAN (Cell differentiation protein RCD1 homolog OS=Homo sapiens GN=RQCD1 PE=1 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.0e-104
Identity = 191/265 (72.08%), Postives = 224/265 (84.53%), Query Frame = 1


Query: 42  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLT 101
           Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT
Sbjct: 24  QWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLT 83

Query: 102 PAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVI 161
             QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVI
Sbjct: 84  AHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVI 143

Query: 162 GALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTA 221
           GALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T 
Sbjct: 144 GALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTY 203

Query: 222 ERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFN 281
           ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D+TF 
Sbjct: 204 ERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFA 263

Query: 282 GCLRDDPTTRRWLQQLLLSVGMSRV 307
             L+DD TT+RWL QL+ ++   +V
Sbjct: 264 QVLKDDTTTKRWLAQLVKNLQEGQV 288

[Close]

BLAST of CmaCh09G009640 vs. Swiss-Prot
Match: RCD1_MACFA (Cell differentiation protein RCD1 homolog OS=Macaca fascicularis GN=RQCD1 PE=2 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.0e-104
Identity = 191/265 (72.08%), Postives = 224/265 (84.53%), Query Frame = 1


Query: 42  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLT 101
           Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT
Sbjct: 24  QWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLT 83

Query: 102 PAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVI 161
             QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVI
Sbjct: 84  AHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVI 143

Query: 162 GALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTA 221
           GALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T 
Sbjct: 144 GALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTY 203

Query: 222 ERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFN 281
           ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D+TF 
Sbjct: 204 ERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFA 263

Query: 282 GCLRDDPTTRRWLQQLLLSVGMSRV 307
             L+DD TT+RWL QL+ ++   +V
Sbjct: 264 QVLKDDTTTKRWLAQLVKNLQEGQV 288

[Close]

BLAST of CmaCh09G009640 vs. Swiss-Prot
Match: RCD1_MOUSE (Cell differentiation protein RCD1 homolog OS=Mus musculus GN=Rqcd1 PE=1 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.0e-104
Identity = 191/265 (72.08%), Postives = 224/265 (84.53%), Query Frame = 1


Query: 42  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLT 101
           Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT
Sbjct: 24  QWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLT 83

Query: 102 PAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVI 161
             QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVI
Sbjct: 84  AHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVI 143

Query: 162 GALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTA 221
           GALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T 
Sbjct: 144 GALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTY 203

Query: 222 ERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFN 281
           ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D+TF 
Sbjct: 204 ERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFA 263

Query: 282 GCLRDDPTTRRWLQQLLLSVGMSRV 307
             L+DD TT+RWL QL+ ++   +V
Sbjct: 264 QVLKDDTTTKRWLAQLVKNLQEGQV 288

[Close]

BLAST of CmaCh09G009640 vs. Swiss-Prot
Match: RCD1_PONAB (Cell differentiation protein RCD1 homolog OS=Pongo abelii GN=RQCD1 PE=2 SV=2)

HSP 1 Score: 381.3 bits (978), Expect = 1.0e-104
Identity = 191/265 (72.08%), Postives = 224/265 (84.53%), Query Frame = 1


Query: 42  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLT 101
           Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT
Sbjct: 24  QWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLT 83

Query: 102 PAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVI 161
             QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL+T SK+RPFEYLRLTSLGVI
Sbjct: 84  AHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVI 143

Query: 162 GALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTA 221
           GALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T 
Sbjct: 144 GALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTY 203

Query: 222 ERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFN 281
           ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNP+A +ALR CLPD L+D+TF 
Sbjct: 204 ERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFA 263

Query: 282 GCLRDDPTTRRWLQQLLLSVGMSRV 307
             L+DD TT+RWL QL+ ++   +V
Sbjct: 264 QVLKDDTTTKRWLAQLVKNLQEGQV 288

[Close]

BLAST of CmaCh09G009640 vs. TrEMBL
Match: A0A0A0K791_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G214190 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 4.7e-165
Identity = 303/319 (94.98%), Postives = 309/319 (96.87%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M+NLPQS SMNAAFGGPG   SIP A+GA PNKERKMASSEQLVLDLSNP+LRENALLEL
Sbjct: 1   MANLPQSLSMNAAFGGPG--PSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS
Sbjct: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           H DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 121 HSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE
Sbjct: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
           QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRD+TFN CLR+DPTTRRWLQQLL +
Sbjct: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHN 300

Query: 301 VGMSRVPTLQAGAGFDHMM 320
           VGMSRVP LQAGAGFDHMM
Sbjct: 301 VGMSRVPALQAGAGFDHMM 317

[Close]

BLAST of CmaCh09G009640 vs. TrEMBL
Match: A0A067L3U6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00927 PE=4 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 5.9e-160
Identity = 291/319 (91.22%), Postives = 307/319 (96.24%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M+NLPQS SMNA FGGP   +S P+A+GA PNK+RKMAS+E LVLDLSNP+LRENALLEL
Sbjct: 1   MANLPQSLSMNAPFGGPS--ASTPTAAGAPPNKDRKMASAEHLVLDLSNPDLRENALLEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL+PAQSNRVCNALALLQCVAS
Sbjct: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVAS 120

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE
Sbjct: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
           QPSSRLLKHIIRCYLRLSDNP+ACDALRSCLPDMLRD+TF+ CLR+DPTTRRWLQQLL +
Sbjct: 241 QPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHN 300

Query: 301 VGMSRVPTLQAGAGFDHMM 320
           VG++RVP LQAG GFDHM+
Sbjct: 301 VGVNRVPGLQAGGGFDHML 317

[Close]

BLAST of CmaCh09G009640 vs. TrEMBL
Match: A0A061GSY1_THECC (Cell differentiation, Rcd1-like protein isoform 1 OS=Theobroma cacao GN=TCM_040506 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 3.2e-158
Identity = 291/319 (91.22%), Postives = 304/319 (95.30%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M NLPQS SMN  FGGP   SS P+A+GA  NK+RKMAS+E LVLDLSNP+LRENALLEL
Sbjct: 3   MVNLPQSLSMNTPFGGPT--SSNPTAAGAPANKDRKMASAEHLVLDLSNPDLRENALLEL 62

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS
Sbjct: 63  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 122

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 123 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 182

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE
Sbjct: 183 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 242

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
           QPSSRLLKHIIRCYLRLSDNP+ACDALRSCLPDMLRD+TF+ CLR+D TTRRWLQQLL +
Sbjct: 243 QPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSTCLREDQTTRRWLQQLLHN 302

Query: 301 VGMSRVPTLQAGAGFDHMM 320
           VG++RVPTLQAG GFDHM+
Sbjct: 303 VGVNRVPTLQAGGGFDHML 319

[Close]

BLAST of CmaCh09G009640 vs. TrEMBL
Match: A0A0D2W9B8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G250200 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 3.2e-158
Identity = 289/317 (91.17%), Postives = 305/317 (96.21%), Query Frame = 1


Query: 3   NLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLELSK 62
           NLPQS SMN+ FGGP   +S P+A+GA  NK+RKMA++E LVLDLSNP+LRENALLELSK
Sbjct: 5   NLPQSLSMNSPFGGPS--ASNPTAAGAPANKDRKMATAEHLVLDLSNPDLRENALLELSK 64

Query: 63  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP 122
           KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
Sbjct: 65  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP 124

Query: 123 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 182
           DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 125 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 184

Query: 183 PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQP 242
           PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQP
Sbjct: 185 PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQP 244

Query: 243 SSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLSVG 302
           SSRLLKHIIRCYLRLSDNP+ACDALRSCLPDMLRD+TF+ CLR+D TTRRWLQQLL +VG
Sbjct: 245 SSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDQTTRRWLQQLLHNVG 304

Query: 303 MSRVPTLQAGAGFDHMM 320
           ++RVPTLQAGAGFDHM+
Sbjct: 305 VNRVPTLQAGAGFDHML 319

[Close]

BLAST of CmaCh09G009640 vs. TrEMBL
Match: B9STZ0_RICCO (Cell differentiation protein rcd1, putative OS=Ricinus communis GN=RCOM_0752590 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 5.5e-158
Identity = 289/319 (90.60%), Postives = 305/319 (95.61%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M+NLPQS SMNA FGGP   +S P+A+GA  NK+RKMAS+E LVLDLSNP+LRENALLEL
Sbjct: 1   MANLPQSLSMNAQFGGPS--ASTPTAAGAPANKDRKMASAEHLVLDLSNPDLRENALLEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL+PAQSNRVCNALALLQCVAS
Sbjct: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVAS 120

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE
Sbjct: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
           QPSSRLLKHIIRCYLRLSDNP+ACDALRSCLPDMLRD+TF+ CLR+DPTTRRWLQQLL +
Sbjct: 241 QPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDNTFSSCLREDPTTRRWLQQLLHN 300

Query: 301 VGMSRVPTLQAGAGFDHMM 320
           VG+SRVP L AGA F+HM+
Sbjct: 301 VGVSRVPGLPAGAAFEHML 317

[Close]

BLAST of CmaCh09G009640 vs. TAIR10
Match: AT3G20800.1 (AT3G20800.1 Cell differentiation, Rcd1-like protein)

HSP 1 Score: 521.2 bits (1341), Expect = 4.6e-148
Identity = 268/319 (84.01%), Postives = 287/319 (89.97%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M+NLP S SM   FGGP   +  P+  GA  NK+R +AS+EQLVLDLSNPELRENALLEL
Sbjct: 1   MANLPSSLSMGTPFGGPSTSAQNPT--GAPANKDRNLASAEQLVLDLSNPELRENALLEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIY VL+PPNLTPAQSNRVCN+LALLQCVAS
Sbjct: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYSVLAPPNLTPAQSNRVCNSLALLQCVAS 120

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           H DTRMLFL AHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 121 HSDTRMLFLKAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           IIPLCLRTMEMGSELSKTVATFIVQKILLDDVG+DYICTTAERFFAVGRVLGNMV +L E
Sbjct: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAERFFAVGRVLGNMVQSLVE 240

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
           QPS RLLKHIIRCYLRLSDNP+AC AL SCLPD LRD +F+ CLR+DPT RRWLQQL+ +
Sbjct: 241 QPSPRLLKHIIRCYLRLSDNPRACAALASCLPDSLRDGSFSNCLREDPTARRWLQQLVHN 300

Query: 301 VGMSRVPTLQAGAGFDHMM 320
           VG+ RVPT Q G GF+HM+
Sbjct: 301 VGVGRVPTHQ-GGGFEHML 316

[Close]

BLAST of CmaCh09G009640 vs. TAIR10
Match: AT5G12980.1 (AT5G12980.1 Cell differentiation, Rcd1-like protein)

HSP 1 Score: 460.3 bits (1183), Expect = 9.7e-130
Identity = 238/318 (74.84%), Postives = 271/318 (85.22%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M+NLP   SM +       G+S PS+S    N +RK++S+EQL+LDLSNPELRENAL EL
Sbjct: 1   MANLPPPLSMKSVALS---GASSPSSSS---NNDRKLSSAEQLILDLSNPELRENALHEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRE+FQDLAPLLW+S GTI ALLQEI+++YP LSPP +TPAQSNRVCNALALLQCVAS
Sbjct: 61  SKKREIFQDLAPLLWHSVGTIPALLQEIIAVYPALSPPTMTPAQSNRVCNALALLQCVAS 120

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           H DTRMLFL AH+PLYLY FLNT+SKSRPFEYLRLTSLGVIGALVKVDDTEVI FLL TE
Sbjct: 121 HTDTRMLFLKAHLPLYLYAFLNTSSKSRPFEYLRLTSLGVIGALVKVDDTEVIRFLLQTE 180

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           I+PLCLRTME GSELSKTVATFIVQK+LLDDVGL+Y+CTTAERFFA+GRVLGNMV +LAE
Sbjct: 181 IVPLCLRTMENGSELSKTVATFIVQKVLLDDVGLEYMCTTAERFFALGRVLGNMVTSLAE 240

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
            PS+RLLKHIIRCYLRL+DNP+ACDAL SCLPD+LRD+TF+GCL DDP   +WLQQLL +
Sbjct: 241 GPSARLLKHIIRCYLRLTDNPRACDALGSCLPDLLRDATFSGCLYDDPPAMQWLQQLLHN 300

Query: 301 VGMSRVPTLQAGAGFDHM 319
           V +      +A  G  HM
Sbjct: 301 VNVGG----RAPQGLAHM 308

[Close]

BLAST of CmaCh09G009640 vs. TAIR10
Match: AT2G32550.1 (AT2G32550.1 Cell differentiation, Rcd1-like protein)

HSP 1 Score: 138.7 bits (348), Expect = 6.4e-33
Identity = 98/296 (33.11%), Postives = 151/296 (51.01%), Query Frame = 1


Query: 21  SSIPSASGAAPNKERKMASSE-----QLVLDLSNPE--LRENALLELSKKRELFQDLAPL 80
           S+  S+S A P +   +A        Q V D+  P+  + + AL  L+  R  F+ L  L
Sbjct: 25  SNASSSSSAPPPRLSVVAHPTVEMIIQWVCDIHKPKSYMSDFALHNLAYHRNDFEFLPSL 84

Query: 81  LWNSFGTIAALLQEIVSIYPVLS--------PPNLTPAQSNRVCNALALLQCVASHPDTR 140
           LW S  T+  +LQE+   Y  L+        P  L P    RV N   L Q +A HPDT 
Sbjct: 85  LWESKNTVYIMLQEVFEAYRHLAGHISLRLFPHPLNPL---RVYNVFLLFQSMACHPDTS 144

Query: 141 MLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKV-DDTEVISFLLSTEIIPL 200
             FL A +P Y YP ++T    +  E +RL +LGVI  ++K  +D  V  +L+ + ++  
Sbjct: 145 RQFLRAKMPNYFYPLMDTGLIDKSDECMRLAALGVIAHMLKASEDGAVNRYLMESGVVGF 204

Query: 201 CLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE--QP 260
           C++ +E GS  +K VA +I+ KI+  D GL Y C  A+RF+ +  +L  ++  L+   +P
Sbjct: 205 CVKPIEFGSTETKKVALYILDKIMSTDQGLYYCCVLADRFYVIDELLKKVLFYLSNMVRP 264

Query: 261 SSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLL 299
            S L   +  CY++LS N +A + +R   P +L D TF+    +DP       QLL
Sbjct: 265 PSSLFSLVTGCYVKLSQNSRARNGIRRYTPFLLFDGTFSRLYAEDPVAANNRIQLL 317

[Close]

BLAST of CmaCh09G009640 vs. NCBI nr
Match: gi|449444060|ref|XP_004139793.1| (PREDICTED: cell differentiation protein RCD1 homolog [Cucumis sativus])

HSP 1 Score: 588.6 bits (1516), Expect = 6.7e-165
Identity = 303/319 (94.98%), Postives = 309/319 (96.87%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M+NLPQS SMNAAFGGPG   SIP A+GA PNKERKMASSEQLVLDLSNP+LRENALLEL
Sbjct: 1   MANLPQSLSMNAAFGGPG--PSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS
Sbjct: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           H DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 121 HSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE
Sbjct: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
           QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRD+TFN CLR+DPTTRRWLQQLL +
Sbjct: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHN 300

Query: 301 VGMSRVPTLQAGAGFDHMM 320
           VGMSRVP LQAGAGFDHMM
Sbjct: 301 VGMSRVPALQAGAGFDHMM 317

[Close]

BLAST of CmaCh09G009640 vs. NCBI nr
Match: gi|802588428|ref|XP_012070881.1| (PREDICTED: cell differentiation protein RCD1 homolog isoform X1 [Jatropha curcas])

HSP 1 Score: 571.6 bits (1472), Expect = 8.4e-160
Identity = 291/319 (91.22%), Postives = 307/319 (96.24%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M+NLPQS SMNA FGGP   +S P+A+GA PNK+RKMAS+E LVLDLSNP+LRENALLEL
Sbjct: 1   MANLPQSLSMNAPFGGPS--ASTPTAAGAPPNKDRKMASAEHLVLDLSNPDLRENALLEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL+PAQSNRVCNALALLQCVAS
Sbjct: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVAS 120

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE
Sbjct: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
           QPSSRLLKHIIRCYLRLSDNP+ACDALRSCLPDMLRD+TF+ CLR+DPTTRRWLQQLL +
Sbjct: 241 QPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHN 300

Query: 301 VGMSRVPTLQAGAGFDHMM 320
           VG++RVP LQAG GFDHM+
Sbjct: 301 VGVNRVPGLQAGGGFDHML 317

[Close]

BLAST of CmaCh09G009640 vs. NCBI nr
Match: gi|823262380|ref|XP_012463939.1| (PREDICTED: cell differentiation protein RCD1 homolog isoform X1 [Gossypium raimondii])

HSP 1 Score: 565.8 bits (1457), Expect = 4.6e-158
Identity = 289/317 (91.17%), Postives = 305/317 (96.21%), Query Frame = 1


Query: 3   NLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLELSK 62
           NLPQS SMN+ FGGP   +S P+A+GA  NK+RKMA++E LVLDLSNP+LRENALLELSK
Sbjct: 5   NLPQSLSMNSPFGGPS--ASNPTAAGAPANKDRKMATAEHLVLDLSNPDLRENALLELSK 64

Query: 63  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP 122
           KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
Sbjct: 65  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP 124

Query: 123 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 182
           DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 125 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 184

Query: 183 PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQP 242
           PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQP
Sbjct: 185 PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQP 244

Query: 243 SSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLSVG 302
           SSRLLKHIIRCYLRLSDNP+ACDALRSCLPDMLRD+TF+ CLR+D TTRRWLQQLL +VG
Sbjct: 245 SSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDQTTRRWLQQLLHNVG 304

Query: 303 MSRVPTLQAGAGFDHMM 320
           ++RVPTLQAGAGFDHM+
Sbjct: 305 VNRVPTLQAGAGFDHML 319

[Close]

BLAST of CmaCh09G009640 vs. NCBI nr
Match: gi|590583471|ref|XP_007014909.1| (Cell differentiation, Rcd1-like protein isoform 1 [Theobroma cacao])

HSP 1 Score: 565.8 bits (1457), Expect = 4.6e-158
Identity = 291/319 (91.22%), Postives = 304/319 (95.30%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M NLPQS SMN  FGGP   SS P+A+GA  NK+RKMAS+E LVLDLSNP+LRENALLEL
Sbjct: 3   MVNLPQSLSMNTPFGGPT--SSNPTAAGAPANKDRKMASAEHLVLDLSNPDLRENALLEL 62

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS
Sbjct: 63  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 122

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 123 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 182

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE
Sbjct: 183 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 242

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
           QPSSRLLKHIIRCYLRLSDNP+ACDALRSCLPDMLRD+TF+ CLR+D TTRRWLQQLL +
Sbjct: 243 QPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSTCLREDQTTRRWLQQLLHN 302

Query: 301 VGMSRVPTLQAGAGFDHMM 320
           VG++RVPTLQAG GFDHM+
Sbjct: 303 VGVNRVPTLQAGGGFDHML 319

[Close]

BLAST of CmaCh09G009640 vs. NCBI nr
Match: gi|255577151|ref|XP_002529459.1| (PREDICTED: cell differentiation protein RCD1 homolog isoform X2 [Ricinus communis])

HSP 1 Score: 565.1 bits (1455), Expect = 7.9e-158
Identity = 289/319 (90.60%), Postives = 305/319 (95.61%), Query Frame = 1


Query: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60
           M+NLPQS SMNA FGGP   +S P+A+GA  NK+RKMAS+E LVLDLSNP+LRENALLEL
Sbjct: 1   MANLPQSLSMNAQFGGPS--ASTPTAAGAPANKDRKMASAEHLVLDLSNPDLRENALLEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL+PAQSNRVCNALALLQCVAS
Sbjct: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVAS 120

Query: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180

Query: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240
           IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE
Sbjct: 181 IIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAE 240

Query: 241 QPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDSTFNGCLRDDPTTRRWLQQLLLS 300
           QPSSRLLKHIIRCYLRLSDNP+ACDALRSCLPDMLRD+TF+ CLR+DPTTRRWLQQLL +
Sbjct: 241 QPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDNTFSSCLREDPTTRRWLQQLLHN 300

Query: 301 VGMSRVPTLQAGAGFDHMM 320
           VG+SRVP L AGA F+HM+
Sbjct: 301 VGVSRVPGLPAGAAFEHML 317

The following BLAST results are available for this feature:

BLAST of CmaCh09G009640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RCD1_BOVIN	1.0e-104	72.08	Cell differentiation protein RCD1 homolog OS=Bos taurus GN=RQCD1 PE=2 SV=1	[more]
RCD1_HUMAN	1.0e-104	72.08	Cell differentiation protein RCD1 homolog OS=Homo sapiens GN=RQCD1 PE=1 SV=1	[more]
RCD1_MACFA	1.0e-104	72.08	Cell differentiation protein RCD1 homolog OS=Macaca fascicularis GN=RQCD1 PE=2 S...	[more]
RCD1_MOUSE	1.0e-104	72.08	Cell differentiation protein RCD1 homolog OS=Mus musculus GN=Rqcd1 PE=1 SV=1	[more]
RCD1_PONAB	1.0e-104	72.08	Cell differentiation protein RCD1 homolog OS=Pongo abelii GN=RQCD1 PE=2 SV=2	[more]

BLAST of CmaCh09G009640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K791_CUCSA	4.7e-165	94.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G214190 PE=4 SV=1	[more]
A0A067L3U6_JATCU	5.9e-160	91.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00927 PE=4 SV=1	[more]
A0A061GSY1_THECC	3.2e-158	91.22	Cell differentiation, Rcd1-like protein isoform 1 OS=Theobroma cacao GN=TCM_0405...	[more]
A0A0D2W9B8_GOSRA	3.2e-158	91.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G250200 PE=4 SV=1	[more]
B9STZ0_RICCO	5.5e-158	90.60	Cell differentiation protein rcd1, putative OS=Ricinus communis GN=RCOM_0752590 ...	[more]

BLAST of CmaCh09G009640 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20800.1	4.6e-148	84.01	Cell differentiation, Rcd1-like protein	[more]
AT5G12980.1	9.7e-130	74.84	Cell differentiation, Rcd1-like protein	[more]
AT2G32550.1	6.4e-33	33.11	Cell differentiation, Rcd1-like protein	[more]

BLAST of CmaCh09G009640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444060\|ref\|XP_004139793.1\|	6.7e-165	94.98	PREDICTED: cell differentiation protein RCD1 homolog [Cucumis sativus]	[more]
gi\|802588428\|ref\|XP_012070881.1\|	8.4e-160	91.22	PREDICTED: cell differentiation protein RCD1 homolog isoform X1 [Jatropha curcas...	[more]
gi\|823262380\|ref\|XP_012463939.1\|	4.6e-158	91.17	PREDICTED: cell differentiation protein RCD1 homolog isoform X1 [Gossypium raimo...	[more]
gi\|590583471\|ref\|XP_007014909.1\|	4.6e-158	91.22	Cell differentiation, Rcd1-like protein isoform 1 [Theobroma cacao]	[more]
gi\|255577151\|ref\|XP_002529459.1\|	7.9e-158	90.60	PREDICTED: cell differentiation protein RCD1 homolog isoform X2 [Ricinus communi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007216	Rcd1/Caf40
IPR016024	ARM-type_fold

Vocabulary: **Biological Process**
Term	Definition
GO:0006402	mRNA catabolic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0030014	CCR4-NOT complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006402	mRNA catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G009640.1	CmaCh09G009640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007216	Rcd1/Caf40	PANTHER	PTHR12262	UNCHARACTERIZED	coord: 1..319 score: 5.1E
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 45..270 score: 1.
None	No IPR available	PFAM	PF04078	Rcd1	coord: 43..299 score: 8.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G009640	Cla016309	Watermelon (97103) v1	cmawmB011
CmaCh09G009640	Csa7G214190	Cucumber (Chinese Long) v2	cmacuB040
CmaCh09G009640	MELO3C013140	Melon (DHL92) v3.5.1	cmameB018
CmaCh09G009640	ClCG09G010980	Watermelon (Charleston Gray)	cmawcgB009
CmaCh09G009640	CSPI07G09990	Wild cucumber (PI 183967)	cmacpiB040
CmaCh09G009640	CmoCh09G009650	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G009640	CmoCh01G011650	Cucurbita moschata (Rifu)	cmacmoB048
CmaCh09G009640	Lsi02G018900	Bottle gourd (USVL1VR-Ls)	cmalsiB018
CmaCh09G009640	Cp4.1LG02g00950	Cucurbita pepo (Zucchini)	cmacpeB046
CmaCh09G009640	Cp4.1LG06g08780	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G009640	MELO3C013140.2	Melon (DHL92) v3.6.1	cmamedB019
CmaCh09G009640	CsaV3_7G022000	Cucumber (Chinese Long) v3	cmacucB0049
CmaCh09G009640	Cla97C09G173700	Watermelon (97103) v2	cmawmbB050
CmaCh09G009640	Bhi09G001400	Wax gourd	cmawgoB0027
CmaCh09G009640	CsGy7G009480	Cucumber (Gy14) v2	cgybcmaB882
CmaCh09G009640	Carg12833	Silver-seed gourd	carcmaB1240
CmaCh09G009640	Carg22372	Silver-seed gourd	carcmaB1223

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh09G009640	CmaCh01G011170	Cucurbita maxima (Rimu)	cmacmaB052

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G009640	Watermelon (97103) v2	cmawmbB018
CmaCh09G009640	Wild cucumber (PI 183967)	cmacpiB016
CmaCh09G009640	Wild cucumber (PI 183967)	cmacpiB019
CmaCh09G009640	Cucumber (Chinese Long) v2	cmacuB016
CmaCh09G009640	Cucumber (Chinese Long) v2	cmacuB019
CmaCh09G009640	Watermelon (Charleston Gray)	cmawcgB013
CmaCh09G009640	Cucumber (Gy14) v2	cgybcmaB886
CmaCh09G009640	Cucumber (Chinese Long) v3	cmacucB0026
CmaCh09G009640	Cucumber (Chinese Long) v3	cmacucB0052