MELO3C013140.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013140.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Cell differentiation, Rcd1-like protein
Location	chr01 : 13207059 .. 13215446 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTACAAAGTACAAAGGTTGCCTGTGAAAATACTCGAAAGAAAAAAGAAAAAGAAAAGAAAAAAAAAAAACAACCTTCCATACTGCCCCTTCGCCGGCGTGAAATCGGAGGAGTATTGGGCTCGAAGCTTCTCGACTGTCGGAAATGGCGAATCTCCCCCAGTCCCTTTCCATGAATGCTGCCTTTGGAGGTCCTGGTCCATCCATCCCTGGTGCCACCGGAGCTCCACCGAACAAGGAGCGAAAAATGGCTTCTTCAGAGCAGTTGGTCCTCGACCTCAGCAATCCGGATCTCCGGGAGAATGCTCTCCTTGAACTTTCGAAGGTAAGATTCCTTTAGCGGAGGAGGAGGAGAGTAGTCGGGGTTTGGTGTTGGCGTTAGTTTTTTTCCTTCTTCTTATTTTGGTGCGATGGTGGTGATAATTAGGGGTTGCAGAGGAAACGAATTCTGTTGGTGTTGGAGAGTTTGTAGCTTTTGTTTGGTACGTGAGAAATTTGTAATTTGGCTGCGGCCGAGAGAAGTGTAGGCGAACGTCTGTGTTTATTTGAAATTAAGTTTTTGTTGGTGTGTATATCGTCGCAGCCAAATCGGGGATTGATGCGAGGTTTCACCTGGTTTTTATCCTTGCCCGTATTAGTGCTACTTTTGTGAATTATTCTGTATGGAGTTGACTCTGACTGATATGTAGCGTAATGAAACTTAACCCAACCGGTTAAAAGAAAGAAATATAAACTCCGATTATTCGATTTCGAGATAACGGACTAGTCTTCTTCTTTCTCTTTCGGCTCTAATTCGTGCTGCAAATTTTGTTGGTATCGAAGTACTAACAACGGTTGGATGGGAAATGAAAGTACAAACTAAAACGTACGCTGTGTTTCTAGCGAAAAAAAATATGGCTGACCCTTTGTTAGTGCTAGGGAAAGGTTTAGCCCATCATGTGGGGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATCAGTTAAACAAGTATAGTTGATGCTCTAATTTGTTTCTGTTTTTATTTTCAGAAGAGGGAATTGTTTCAAGATTTGGCTCCCTTGTTGTGGAACTCTTTTGGAACGATTGCTGCCTTACTGCAAGTATGCTGTTTTACTTGTCAAACTTTCTATCAATTATCTAATCATTGATGTGATACAAAATCTTATGTTTATTTATTTATTTCGTTGGCCATATTTCATTCCCTAATGTTGTTAAGTTATTTTTAATTATTCTTTTTGGCTCTTACAGGAGATTGTATCGATATATCCCGTTCTTTCACCCCCAAATCTAACCCCTGCGCAGTCAAATAGAGTTTGCAATGCTCTTGCTCTTCTTCAGGTCACTCACTGTTAAACTTTTCACTTAAGGGGAACCAAATTATAGATGGTTTTATTGTCGCTAGTCACTCATGGACATTTTTATCTGAAACTACAACTTATGCACTCTGCATGTTTTTTGCAGTGTGTAGCCTCTCATTCAGATACAAGGATGTTGTTTCTCAATGGTAATGTTTTTCATCTTGTTTATGTTTGAACACTTTTGCTTAAGAATTCGTATACGAAAAAAAAGTGTCCTTGACAAATCTTACACTAATCTATGAGGAGGGAGGGACTAAGGGAGTAGGCCATGTGGATCCGGAGCAGTTTCAAAAAGGTTCTTCCCCATATACTGATGGAGAAGGGACATAATAGAAATATACCTTTTGCATGTGCCACACTCACCTCATATTGGTTGGAGGAGATCCTGATGAATTCTCCTTTTCAGGACCAAGGGATAGTATTTGTTGGCTAGCTTGTTGTTTTGTGATATTGTGGGGAGTGTGGATTCAATGGAGTGGTAGGAATTTAAAGAGGTCGAGCGATATTCAAGGAGGTGCGAGAAGGAGTGAGGTCTAAGCATCTTTAAAGTGTCTGATAATTGGAATTTGTTTTGTAATTATTAGCTTGGTTTCAGTCTTTTTCACCAGAGAGATTTCCTGTGGTCGAGGTCTCCTTTTCTCTTTTAATTTTATTTTTCAATGCTCCTGTGTATTCTTTCATATGTCTCAATGAAAGCTTTCTAACTTCTGCATAAGCCATAATGATAATTCTCGATTGAATATCTAGCAAAAAAGTAAAGTACATATACAAATATGACTTGGGTGCCCGTCAAGAGTGTTTTAAAGCTCAAGGCAACAATAGTCTTCTGGGGCTTAAGCACATGGTGCCAAAGAAAAGCAGTGTTGGTTTTTTCTTTGAGGCGCACTAAAAAAAAAAAAAAAAAATGATACCCTTGAACACAAAAATTTATATTTAGACTTGGTAAATTTTATTTTTTAAGTTAATGAAGAAGGAAAGCCCCCTGATTATTTCTAAAAAATAATGAAAAAGCCCCGAGGTGCAGGGTTTTGAGGCTGGGGGCTTCACAAAAGGGGAGCTCCACGAGGGACACCTTATTTTGTGAGTCTCACCTTGTCAAGGCCAGGCACCATACTTGCGCCTTGAGCCTCGACACTTCTGTACGGGAGGGCATTTTAATACACTGGTCATCGGTCATACGATTTACGTAATTTCCTTAAGACGATTGCATTCTCATAATATTTCCCAGTATTCTAATTAGTGTCATTTTCAAGAATTGACCAGCAACTAAATTTTATCCTTTGCAGCTCACATACCACTGTATTTGTATCCTTTTCTTAACACAACTAGCAAGTCAAGACCTTTTGAGTACTTGCGCCTTACTAGCTTAGGTGTCATTGGTGCATTAGTGAAGGTATTTCACTTTAAAGCATGGGCTTTCTCTTCTTTGTTCTCGTTTCTTTACGTGCACTTTCAATGTTTTGATTCCACTTATAACTTTGATACAACCGTATGGACATAGGATGTGGACTGGAAAATATGGCAGGCGTTCAGAATAAAAGGAAACTTCAATTGCATGAATTTCTGTAGCTTTTGCTTTTGATACCTTATAAATCATAAGATCTAAACCTTCTAAATGTTAAGTACGCTTTTCTTTTTTTTGAGATAAAATATTAAGTATGGTTTGTTATCAATTGAAACTTTTTTATTTAAATGAAGAAGCTATCAGATTAAGTAGCACCATTTAGGGCTTTCTTAAAATCTTTTCGGTGCATTAATCATATTACTTTTGTAACTTTATCCCGTTCTTTAGAAAAAGATAGTTTATGTGACTGCTTCAATATGTACAAATATATGCACCTTTGGTACTTTCTTGTAGTAATTTTATGATGGGCGTTTTTTTTTTTTTATAATTTTGTTCTTTTCTCCTGTTGATATTTATATTTCTTTGATTATTAAAGATTCAAACTCTTTTTTGTAGTAATTCTTGGTAGCTCTTGTTTTTGTGATGGCCTATGTTTTTTTCATGAGCTTTTTCTAGACTTCGTTGCCCAGGAAAGAAAAAAAAGGAAGGAGAAAAAAGAAAAAAGAATGAAAAGCTGTGCACCAAGGTCCAGATAATGTAGTTTGGTATTTAAGCACCGATTTGTATAAGACTTTAGCTTAACCTGCTTGAATAAAATTACTTCGGCATGGCAGGAAAAAGGATAATACTACGACATTAAACTTTTTTGGCCTTTAGACGTGATATTGGTTGGTGTTTCATTATTCAAATGAAAATCTGACATAGTAGTCTATGTATGCCTTCAGAAAATTGCTAAGTCCGTGTATCTAAATATAAGAATATACTCCATACCTTCCACTACATAACCTCAGGTACATACAGGCATTGGTACGAGGTGGCCTTTTAATTTCATTGTTACATGGGGCGTAGGCTATGTTTCAATAAATCTTGTTGATCTTTTGAAAATGTGAGTGCTGTTTTCCTTCTTGTTTTCCCAGGTAGATGATACAGAAGTAATAAGTTTTCTTCTGTCAACTGAAATAATTCCTCTATGCCTGCGTACCATGGAAATGGGAAGTGAGTTGTCAAAAACAGTTGAGTTTCCTGATGCTACTCCTATTTCTTTCTCTCTCTATATATTTTTTTCTATTTGTTTCTGCAATTTTACAATGGCACATTTTGGGAGTTAACATCTATATTGTAATTTTCACGGAAAGTTTTGATTGTTTTCTTAATGGGATGAAAATGAAGAAATGTCAACATTTCTCCTCCATTTCTTTTCCCGTTCTTATCAAAATCAAGGGATGTGGGGACTAACTCTCAATTAGTGGACTCTTTCTTGAACTCTGAACAATCCTTTCCTTTTGAGAGGGTAGGAACATGTCCTCTTCTCCATTTGTTGGCCCCTCAATTTTTTGCCTTTTTTTTTTCCAAGACTTCTCTCAACCTTTCCGTGGTTTATACGTATGAAAATAGCAGTAAACAATTTAATGGTACCTTTCTTCCATCTCTGATTCAGATGTTATTTTAGTGAACAAAGTATTAGAGTTTATACTATGCGCTCGTTAACTAACTACTACGACCAACAATTTTATGCTGCAGGTTGCAACATTTATTGTGCAGAAAATTTTGCTGGATGATGTGGGGTTGGATTATATTTGTACTACAGCTGAGCGATTTTTCGCTGTTGGTCGGGTTCTAGGGAATATGGTAGCAGCTCTTGCTGAACAGCCCTCCTCTCGGCTATTGAAACACATAATTCGATGTTATCTTCGATTGTCCGATAACCCAAAGTCGGTAAACGTAGATTTACATCTCATTTGAGGCAATTATCCTTCACTGTTTCTTTAACTTGTTCCATTGTTCAGGGCTTGCGACGCCTTGAGGAGCTGTCTTCCAGACATGTTGAGGGATGCTACTTTCAATAGTTGCCTTCGGGTAAGTGCCCTTTCTAAATGGACTGCATTACTATTTGGTAGGGCTTCTAATGAGGAACAATGTTTACAATTGATGGAATATTATCTAAGTGGGAAGTGTGGTTGTGGTTGTTGCATAAGAAACCATTTCATCAATAAATGAAGTATCTAATTACAAACAAAACCCAAGTACAAGATTATGCTAACCATTTCATCGATAAATGAAATATCTAGTTACAGACAAAACCCAAGTACAAGATTATGCAAACCATTTCTTCGATAAATGAAATATCTAATTACAAACAAAACCCAAGTACAAGATGAACCGACATGACAACCCCATCAATAGATGAAAAGTATGATGAAATCAACGAGGTAGGGTGGATGAACAAAATGGCGATAAAAAAATGTAAAAAGAATTGTTGTAGAAGCCCGCTACTATAGAGAGACCAAACAAATGATCAATTCAAAGAATATCAAACTGAAGTGGAACCCCCAATTGAATCTTTTTTCTTATATATAAGAAACAAATATATTCATGGAACAAAATAAAAACAACCTAAGGGCAAGGGACAAGAGGCCCTCCCTAAAAAAAACTAAAGAATAAGGGGCCAAGGGCCTTCCAATTGTTGAAAATCATAGAAATGATGTAATTACAAAAGTGTTTGGTATTAATTCGTACTCCGTCAAGAAGTTGTGTGTTGCAACACAATCCAAAAAGAATCAAAAGAATTATAGTTGTCTTAAAAAATTCTACCATTCCTCTCTTTCCAAATACACCACAAAAGGGAACGGGTAGCACAAGCCCACAAGATGTAACCTTTCGGACTATAACCTCTAATTTTGAGCCTTTCCAACATCCAACTGTCAATCTTACTAGAAAGACAAACCTCTGAGTCAAAGATTCTAAACAGAGTGTTCCGAGCTTTCCAGGTCCAGGGTCTCCTCTTCTTTGAAACAAAGGCAACACATCGAGGGGATGAGTATGGTATGCCAAAATAGTTTCTCATGAGCATTGAAACTTCTATAAGCGAGCGACCATAAGAAGAATTTCACCTTTTTCGCGATTTTAGTCTTCCATGTGGCGAATCAAGGAAGCAGAATGGAGGGGATCTCTTGGTTAATTTAAGAAAAGTTAATTTCGTAGTAAAGCTGCCATTAGCATTAGGTAGGAGTCCATTTAAGATTATCACGATCGTCCGAAGGGGCCCAAGAATGAAGAGTTTCCTGAATAGTGGCCACGTTGTCAAGCTCACAATCAAGCACATTTCTTCTACGACCCATATTCCAAGAATGACTGGCATTACACCAACAGTCAGCCACAAGAGCATCCTTGTTCAATGACCTGGAGAACAAATTAGGGAATATTTCTGCTAAAGGTTGCAACACCAGCTGTCATTCCAAAATCTGATTTTTGTTCCCTCACCTAACAAAAAGGCCGAGAAATTAAGGAAAGTCTCCTTGTGTTTCAGGATGCCAGCCCATAATCTATAAGACCTTCCCCTGTTTGGAGCTTTAGGAAACTATCCATTCTCCTCCAAGCCGTAAATAGCCACAATTAAGCGCTTCCATAACGCATTTTCTTCCTTACTAAATCTCCAAAGCCATGCAAGCCAAAGTCATGGAACCCCCAATTGAATCAACATGCAAGCTTAAGTAACCACTAACGACCAAAAAATAACTATGACAATAATGATGAGAGAAGGCCAAAAGAGGATCGAAGAGCGTATCCAAGCTGACAAAGAACCCTCCGAAGGGTGGATGAAACTTTTTTCTCATTAGAGCTCTAGCACTCTTAGTTCCAATGTCTCTGATACTTTTCGTTTGTTACATAATAAAACATGGTTTAAAATATTATAGAAAAGGGTTCTGGAAAATTAGTGCTCCACTAAGAAAAATACTATTTTCAACATCATCCCGAACTCATGTTCAGTCGGAGCTCCTACTTCCACAGCTACTGCTTATGAGTATATATATACATACATGTGTTTATACATGTTTTGTTTTCAAAAAACTTATTGACTTATTTTGCTTTGTTTTTGGTTCATTTCCATTTTTTTCTTTTAATGTTGACAGGAGGATCCAACCACTAGGAGGTGGCTGCAACAGTTGCTACACAACGTAGGAATGAGTAGGGTTCCAGCACTTCAGGCTGGAGCTGGATTTGATCACATGATGGTGAACTAAACCTGAAATGTATGTTTCAAATTTTCAGTATTTGTCATATAGTTTTACAGTTTGCAGCTTTGCTACAACTTATTTATTTTCTCTGCTGTGTTTATTTATTTGTAAGCATGATTTAGTTTTGTAGTTAGGGACGTTGTATCTGAAAAAAAAAAAAGAAAGAAAATTCATTTAACTTGAACAATGCCGTTTCTAGTGGAAGAATTATACATGTTCATAGTTGCCAATAGAACTGCTTTTAGCTGTGTAACATCTAAGTCTTATCTACCAAATATTTTGTTTCAATTAAGGGAAAAGGGTCTCTTACTTTGTTAGACATTTTTTAGCATGTCGATGAATTTATTTTTATTTAGTCCAAGGTCTGAAACTATTACACTTTTAGTCTTAGGTTTTTAATTTCAATTTAGTCTCAAGGTTTTAAAATGTCAAAATTTTACTGTTGAGGTTTGGAGGCTTTTTTTTTCTTTTTTTTTTCAAATTTCAATTTTCAGTTTGGCCTATAAGTTTCATCATTTACACCTTTAACCATTTTTTCTGTAAGAAGATTGAACAGTTAGAACGATAAAGCACAAACAGAGATGGGAAGATCAGATCTTTTTGACACTTTTTATGTGATTTAGTTTCTGATATTTGTTTGTTCTTTTTCTTGTCGAGCAGAATTTCACTAAGTTACTGTGTTTGTTTTTGATGCAGCCAAGTCTGTGTAGTACTTTAGGAGATTTCTTTTACGATAGGTCTTAGCCATGAACCCTCCTTCATATCAATTCAAGTGCGCAACTTACCAAACGATCTTGAGAACATTGAGCATTTGTTCGAATCTTTGTGGGTTCTAAGTAGCTCTTTGGTTTCCTACAACCCTACGAACATTAGTTTTACCATATTCGCCTCAACATTAGTTCCCTCTCAACAATCCATTCTCAAAATCGTTGGGATTTGTCTCTTCTTACAATGCCAACTGAAGGAAATGGAGAAAGGAATGGTAGAGACAAGATTGGAATTTCAGAGACGAGATCAAACCCCCACCTCGAGGAATAGATGTCGTGACATTCATTTATCCTGTTAACTAGTGAATTCGTTGTGTATTTTTTAGTGCATGAAAGCATAAATAGCTTTGATTGGAATAGTGTTTGTAGATTTTTCTTTCCATTACTTCACTTGGGTTGGGTGGAGTCTACCTGATTGATCGTCCAACGACATGGCGGTTTAGTAAATTGACGGTTTAGTAAA

mRNA sequence

ACTACAAAGTACAAAGGTTGCCTGTGAAAATACTCGAAAGAAAAAAGAAAAAGAAAAGAAAAAAAAAAAACAACCTTCCATACTGCCCCTTCGCCGGCGTGAAATCGGAGGAGTATTGGGCTCGAAGCTTCTCGACTGTCGGAAATGGCGAATCTCCCCCAGTCCCTTTCCATGAATGCTGCCTTTGGAGGTCCTGGTCCATCCATCCCTGGTGCCACCGGAGCTCCACCGAACAAGGAGCGAAAAATGGCTTCTTCAGAGCAGTTGGTCCTCGACCTCAGCAATCCGGATCTCCGGGAGAATGCTCTCCTTGAACTTTCGAAGAAGAGGGAATTGTTTCAAGATTTGGCTCCCTTGTTGTGGAACTCTTTTGGAACGATTGCTGCCTTACTGCAAGAGATTGTATCGATATATCCCGTTCTTTCACCCCCAAATCTAACCCCTGCGCAGTCAAATAGAGTTTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCCTCTCATTCAGATACAAGGATGTTGTTTCTCAATGCTCACATACCACTGTATTTGTATCCTTTTCTTAACACAACTAGCAAGTCAAGACCTTTTGAGTACTTGCGCCTTACTAGCTTAGGTGTCATTGGTGCATTAGTGAAGGTAGATGATACAGAAGTAATAAGTTTTCTTCTGTCAACTGAAATAATTCCTCTATGCCTGCGTACCATGGAAATGGGAAGTGAGTTGTCAAAAACAGGTTGCAACATTTATTGTGCAGAAAATTTTGCTGGATGATGTGGGGTTGGATTATATTTGTACTACAGCTGAGCGATTTTTCGCTGTTGGTCGGGTTCTAGGGAATATGGTAGCAGCTCTTGCTGAACAGCCCTCCTCTCGGCTATTGAAACACATAATTCGATGTTATCTTCGATTGTCCGATAACCCAAAGGCTTGCGACGCCTTGAGGAGCTGTCTTCCAGACATGTTGAGGGATGCTACTTTCAATAGTTGCCTTCGGGAGGATCCAACCACTAGGAGGTGGCTGCAACAGTTGCTACACAACGTAGGAATGAGTAGGGTTCCAGCACTTCAGGCTGGAGCTGGATTTGATCACATGATGGTGAACTAAACCTGAAATCCAAGTCTGTGTAGTACTTTAGGAGATTTCTTTTACGATAGGTCTTAGCCATGAACCCTCCTTCATATCAATTCAAGTGCGCAACTTACCAAACGATCTTGAGAACATTGAGCATTTGTTCGAATCTTTGTGGGTTCTAAGTAGCTCTTTGGTTTCCTACAACCCTACGAACATTAGTTTTACCATATTCGCCTCAACATTAGTTCCCTCTCAACAATCCATTCTCAAAATCGTTGGGATTTGTCTCTTCTTACAATGCCAACTGAAGGAAATGGAGAAAGGAATGGTAGAGACAAGATTGGAATTTCAGAGACGAGATCAAACCCCCACCTCGAGGAATAGATGTCGTGACATTCATTTATCCTGTTAACTAGTGAATTCGTTGTGTATTTTTTAGTGCATGAAAGCATAAATAGCTTTGATTGGAATAGTGTTTGTAGATTTTTCTTTCCATTACTTCACTTGGGTTGGGTGGAGTCTACCTGATTGATCGTCCAACGACATGGCGGTTTAGTAAATTGACGGTTTAGTAAA

Coding sequence (CDS)

ATGGCGAATCTCCCCCAGTCCCTTTCCATGAATGCTGCCTTTGGAGGTCCTGGTCCATCCATCCCTGGTGCCACCGGAGCTCCACCGAACAAGGAGCGAAAAATGGCTTCTTCAGAGCAGTTGGTCCTCGACCTCAGCAATCCGGATCTCCGGGAGAATGCTCTCCTTGAACTTTCGAAGAAGAGGGAATTGTTTCAAGATTTGGCTCCCTTGTTGTGGAACTCTTTTGGAACGATTGCTGCCTTACTGCAAGAGATTGTATCGATATATCCCGTTCTTTCACCCCCAAATCTAACCCCTGCGCAGTCAAATAGAGTTTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCCTCTCATTCAGATACAAGGATGTTGTTTCTCAATGCTCACATACCACTGTATTTGTATCCTTTTCTTAACACAACTAGCAAGTCAAGACCTTTTGAGTACTTGCGCCTTACTAGCTTAGGTGTCATTGGTGCATTAGTGAAGGTAGATGATACAGAAGTAATAAGTTTTCTTCTGTCAACTGAAATAATTCCTCTATGCCTGCGTACCATGGAAATGGGAAGTGAGTTGTCAAAAACAGGTTGCAACATTTATTGTGCAGAAAATTTTGCTGGATGA

Protein sequence

MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTGCNIYCAENFAG

Homology

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BLAST of MELO3C013140.2 vs. NCBI nr
Match: XP_004139793.1 (PREDICTED: cell differentiation protein RCD1 homolog [Cucumis sativus] >XP_008447722.1 PREDICTED: cell differentiation protein RCD1 homolog [Cucumis melo] >XP_011658988.1 PREDICTED: cell differentiation protein RCD1 homolog [Cucumis sativus] >XP_011658989.1 PREDICTED: cell differentiation protein RCD1 homolog [Cucumis sativus] >XP_016900485.1 PREDICTED: cell differentiation protein RCD1 homolog [Cucumis melo] >KGN44182.1 hypothetical protein Csa_7G214190 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 2.7e-102
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60
           MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK
Sbjct: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60

Query: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120
           KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120

Query: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180
           DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PLCLRTMEMGSELSKT 197
           PLCLRTMEMGSELSKT
Sbjct: 181 PLCLRTMEMGSELSKT 196

[Close]

BLAST of MELO3C013140.2 vs. NCBI nr
Match: XP_022940835.1 (CCR4-NOT transcription complex subunit 9-like [Cucurbita moschata])

HSP 1 Score: 369.0 bits (946), Expect = 1.1e-98
Identity = 192/198 (96.97%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFG--GPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLEL 60
           M+NLPQSLSM+AAFG  GPGPSIP A+GAPPNKERKMASSEQLVLDLSNPDLRENALLEL
Sbjct: 1   MSNLPQSLSMSAAFGGPGPGPSIPSASGAPPNKERKMASSEQLVLDLSNPDLRENALLEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS
Sbjct: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120

Query: 121 HSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           HSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 121 HSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180

Query: 181 IIPLCLRTMEMGSELSKT 197
           IIPLCLRTMEMGSELSKT
Sbjct: 181 IIPLCLRTMEMGSELSKT 198

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BLAST of MELO3C013140.2 vs. NCBI nr
Match: XP_022139599.1 (CCR4-NOT transcription complex subunit 9 isoform X2 [Momordica charantia])

HSP 1 Score: 366.7 bits (940), Expect = 5.2e-98
Identity = 188/196 (95.92%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60
           M+NLPQS+SMNA FGGPGPSIP A+GAPP KERKMA SEQLVLDLSNPDLRENALLELSK
Sbjct: 1   MSNLPQSISMNAPFGGPGPSIPSASGAPPTKERKMAFSEQLVLDLSNPDLRENALLELSK 60

Query: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120
           KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASH 
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP 120

Query: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180
           DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PLCLRTMEMGSELSKT 197
           PLCLRTMEMGSELSKT
Sbjct: 181 PLCLRTMEMGSELSKT 196

[Close]

BLAST of MELO3C013140.2 vs. NCBI nr
Match: XP_012070881.1 (cell differentiation protein RCD1 homolog isoform X1 [Jatropha curcas] >KDP39170.1 hypothetical protein JCGZ_00927 [Jatropha curcas])

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-95
Identity = 185/196 (94.39%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60
           MANLPQSLSMNA FGGP  S P A GAPPNK+RKMAS+E LVLDLSNPDLRENALLELSK
Sbjct: 1   MANLPQSLSMNAPFGGPSASTPTAAGAPPNKDRKMASAEHLVLDLSNPDLRENALLELSK 60

Query: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120
           KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL+PAQSNRVCNALALLQCVASH 
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVASHP 120

Query: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180
           DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PLCLRTMEMGSELSKT 197
           PLCLRTMEMGSELSKT
Sbjct: 181 PLCLRTMEMGSELSKT 196

[Close]

BLAST of MELO3C013140.2 vs. NCBI nr
Match: XP_022936269.1 (CCR4-NOT transcription complex subunit 9-like [Cucurbita moschata] >XP_023535704.1 CCR4-NOT transcription complex subunit 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.6 bits (919), Expect = 1.4e-95
Identity = 188/198 (94.95%), Postives = 191/198 (96.46%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGP--GPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLEL 60
           M+NLPQS SMNAAFGGP  G SIP A+GA PNKERKMASSEQLVLDLSNP+LRENALLEL
Sbjct: 1   MSNLPQSHSMNAAFGGPGIGSSIPSASGAAPNKERKMASSEQLVLDLSNPELRENALLEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS
Sbjct: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120

Query: 121 HSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           H DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE
Sbjct: 121 HPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180

Query: 181 IIPLCLRTMEMGSELSKT 197
           IIPLCLRTMEMGSELSKT
Sbjct: 181 IIPLCLRTMEMGSELSKT 198

[Close]

BLAST of MELO3C013140.2 vs. TAIR10
Match: AT3G20800.1 (Cell differentiation, Rcd1-like protein)

HSP 1 Score: 340.9 bits (873), Expect = 5.6e-94
Identity = 176/196 (89.80%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60
           MANLP SLSM   FGGP  S    TGAP NK+R +AS+EQLVLDLSNP+LRENALLELSK
Sbjct: 1   MANLPSSLSMGTPFGGPSTSAQNPTGAPANKDRNLASAEQLVLDLSNPELRENALLELSK 60

Query: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120
           KRELFQDLAPLLWNSFGTIAALLQEIVSIY VL+PPNLTPAQSNRVCN+LALLQCVASHS
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASHS 120

Query: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180
           DTRMLFL AHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 121 DTRMLFLKAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PLCLRTMEMGSELSKT 197
           PLCLRTMEMGSELSKT
Sbjct: 181 PLCLRTMEMGSELSKT 196

[Close]

BLAST of MELO3C013140.2 vs. TAIR10
Match: AT5G12980.1 (Cell differentiation, Rcd1-like protein)

HSP 1 Score: 290.4 bits (742), Expect = 8.6e-79
Identity = 152/198 (76.77%), Postives = 169/198 (85.35%), Query Frame = 0


Query: 1   MANLPQSLSMN--AAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLEL 60
           MANLP  LSM   A  G   PS      +  N +RK++S+EQL+LDLSNP+LRENAL EL
Sbjct: 1   MANLPPPLSMKSVALSGASSPS------SSSNNDRKLSSAEQLILDLSNPELRENALHEL 60

Query: 61  SKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVAS 120
           SKKRE+FQDLAPLLW+S GTI ALLQEI+++YP LSPP +TPAQSNRVCNALALLQCVAS
Sbjct: 61  SKKREIFQDLAPLLWHSVGTIPALLQEIIAVYPALSPPTMTPAQSNRVCNALALLQCVAS 120

Query: 121 HSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTE 180
           H+DTRMLFL AH+PLYLY FLNT+SKSRPFEYLRLTSLGVIGALVKVDDTEVI FLL TE
Sbjct: 121 HTDTRMLFLKAHLPLYLYAFLNTSSKSRPFEYLRLTSLGVIGALVKVDDTEVIRFLLQTE 180

Query: 181 IIPLCLRTMEMGSELSKT 197
           I+PLCLRTME GSELSKT
Sbjct: 181 IVPLCLRTMENGSELSKT 192

[Close]

BLAST of MELO3C013140.2 vs. TAIR10
Match: AT2G32550.1 (Cell differentiation, Rcd1-like protein)

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-15
Identity = 56/167 (33.53%), Postives = 84/167 (50.30%), Query Frame = 0


Query: 40  QLVLDLSNPD--LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLS--- 99
           Q V D+  P   + + AL  L+  R  F+ L  LLW S  T+  +LQE+   Y  L+   
Sbjct: 51  QWVCDIHKPKSYMSDFALHNLAYHRNDFEFLPSLLWESKNTVYIMLQEVFEAYRHLAGHI 110

Query: 100 -----PPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFE 159
                P  L P    RV N   L Q +A H DT   FL A +P Y YP ++T    +  E
Sbjct: 111 SLRLFPHPLNPL---RVYNVFLLFQSMACHPDTSRQFLRAKMPNYFYPLMDTGLIDKSDE 170

Query: 160 YLRLTSLGVIGALVKV-DDTEVISFLLSTEIIPLCLRTMEMGSELSK 196
            +RL +LGVI  ++K  +D  V  +L+ + ++  C++ +E GS  +K
Sbjct: 171 CMRLAALGVIAHMLKASEDGAVNRYLMESGVVGFCVKPIEFGSTETK 214

[Close]

BLAST of MELO3C013140.2 vs. Swiss-Prot
Match: sp|Q6IP65|CNOT9_XENLA (CCR4-NOT transcription complex subunit 9 OS=Xenopus laevis OX=8355 GN=cnot9 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.4e-63
Identity = 128/176 (72.73%), Postives = 143/176 (81.25%), Query Frame = 0


Query: 24  ATGAPPNKERKMASSE---QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIA 83
           AT AP          E   Q + +LS+PD RENALLELSKKRE   DLAP+LW+SFGTIA
Sbjct: 5   ATAAPVPAALAQVDREKIYQWINELSSPDTRENALLELSKKRESVPDLAPMLWHSFGTIA 64

Query: 84  ALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLN 143
           ALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL+
Sbjct: 65  ALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLH 124

Query: 144 TTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT 197
           T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Sbjct: 125 TVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT 180

[Close]

BLAST of MELO3C013140.2 vs. Swiss-Prot
Match: sp|Q6P819|CNOT9_XENTR (CCR4-NOT transcription complex subunit 9 OS=Xenopus tropicalis OX=8364 GN=cnot9 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.4e-63
Identity = 128/176 (72.73%), Postives = 143/176 (81.25%), Query Frame = 0


Query: 24  ATGAPPNKERKMASSE---QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIA 83
           AT AP          E   Q + +LS+PD RENALLELSKKRE   DLAP+LW+SFGTIA
Sbjct: 5   ATAAPVPAALAQVDREKIYQWINELSSPDTRENALLELSKKRESVPDLAPMLWHSFGTIA 64

Query: 84  ALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLN 143
           ALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL+
Sbjct: 65  ALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLH 124

Query: 144 TTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT 197
           T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Sbjct: 125 TVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT 180

[Close]

BLAST of MELO3C013140.2 vs. Swiss-Prot
Match: sp|A7MB47|CNOT9_BOVIN (CCR4-NOT transcription complex subunit 9 OS=Bos taurus OX=9913 GN=CNOT9 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.8e-62
Identity = 127/176 (72.16%), Postives = 143/176 (81.25%), Query Frame = 0


Query: 24  ATGAPPNKERKMASSE---QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIA 83
           AT AP          E   Q + +LS+P+ RENALLELSKKRE   DLAP+LW+SFGTIA
Sbjct: 5   ATAAPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIA 64

Query: 84  ALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLN 143
           ALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL+
Sbjct: 65  ALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLH 124

Query: 144 TTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT 197
           T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Sbjct: 125 TVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT 180

[Close]

BLAST of MELO3C013140.2 vs. Swiss-Prot
Match: sp|Q92600|CNOT9_HUMAN (CCR4-NOT transcription complex subunit 9 OS=Homo sapiens OX=9606 GN=CNOT9 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.8e-62
Identity = 127/176 (72.16%), Postives = 143/176 (81.25%), Query Frame = 0


Query: 24  ATGAPPNKERKMASSE---QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIA 83
           AT AP          E   Q + +LS+P+ RENALLELSKKRE   DLAP+LW+SFGTIA
Sbjct: 5   ATAAPVPTTLAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIA 64

Query: 84  ALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLN 143
           ALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL+
Sbjct: 65  ALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLH 124

Query: 144 TTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT 197
           T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Sbjct: 125 TVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT 180

[Close]

BLAST of MELO3C013140.2 vs. Swiss-Prot
Match: sp|Q4R347|CNOT9_MACFA (CCR4-NOT transcription complex subunit 9 OS=Macaca fascicularis OX=9541 GN=CNOT9 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.8e-62
Identity = 127/176 (72.16%), Postives = 143/176 (81.25%), Query Frame = 0


Query: 24  ATGAPPNKERKMASSE---QLVLDLSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIA 83
           AT AP          E   Q + +LS+P+ RENALLELSKKRE   DLAP+LW+SFGTIA
Sbjct: 5   ATAAPVPTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIA 64

Query: 84  ALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHSDTRMLFLNAHIPLYLYPFLN 143
           ALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASH +TR  FL AHIPL+LYPFL+
Sbjct: 65  ALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLH 124

Query: 144 TTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT 197
           T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Sbjct: 125 TVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT 180

[Close]

BLAST of MELO3C013140.2 vs. TrEMBL
Match: tr|A0A1S3BI21|A0A1S3BI21_CUCME (cell differentiation protein RCD1 homolog OS=Cucumis melo OX=3656 GN=LOC103490130 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.8e-102
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60
           MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK
Sbjct: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60

Query: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120
           KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120

Query: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180
           DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PLCLRTMEMGSELSKT 197
           PLCLRTMEMGSELSKT
Sbjct: 181 PLCLRTMEMGSELSKT 196

[Close]

BLAST of MELO3C013140.2 vs. TrEMBL
Match: tr|A0A0A0K791|A0A0A0K791_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G214190 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.8e-102
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60
           MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK
Sbjct: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60

Query: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120
           KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120

Query: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180
           DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PLCLRTMEMGSELSKT 197
           PLCLRTMEMGSELSKT
Sbjct: 181 PLCLRTMEMGSELSKT 196

[Close]

BLAST of MELO3C013140.2 vs. TrEMBL
Match: tr|A0A067L3U6|A0A067L3U6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00927 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 7.2e-96
Identity = 185/196 (94.39%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60
           MANLPQSLSMNA FGGP  S P A GAPPNK+RKMAS+E LVLDLSNPDLRENALLELSK
Sbjct: 1   MANLPQSLSMNAPFGGPSASTPTAAGAPPNKDRKMASAEHLVLDLSNPDLRENALLELSK 60

Query: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120
           KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL+PAQSNRVCNALALLQCVASH 
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVASHP 120

Query: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180
           DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PLCLRTMEMGSELSKT 197
           PLCLRTMEMGSELSKT
Sbjct: 181 PLCLRTMEMGSELSKT 196

[Close]

BLAST of MELO3C013140.2 vs. TrEMBL
Match: tr|A0A2P4H0T5|A0A2P4H0T5_QUESU (Cell differentiation protein rcd1 like OS=Quercus suber OX=58331 GN=CFP56_26785 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.7e-95
Identity = 184/196 (93.88%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60
           MANLPQSLSMNA FGGP  S PGA GAPP+K+RKMAS+E LVLDLSNPDLRENALLELSK
Sbjct: 1   MANLPQSLSMNAPFGGPSASAPGAAGAPPSKDRKMASAEHLVLDLSNPDLRENALLELSK 60

Query: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120
           KRELFQDLAPLLWNSFGTIAALLQEIV IYPVLSPPNLTPAQSNRVCNALALLQCVASH 
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVYIYPVLSPPNLTPAQSNRVCNALALLQCVASHP 120

Query: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180
           DTRMLFLNAHIPLYLYPFLNTTSK RPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 121 DTRMLFLNAHIPLYLYPFLNTTSKLRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PLCLRTMEMGSELSKT 197
           PLCLRTMEMGSELSKT
Sbjct: 181 PLCLRTMEMGSELSKT 196

[Close]

BLAST of MELO3C013140.2 vs. TrEMBL
Match: tr|A0A2I4EYS8|A0A2I4EYS8_9ROSI (cell differentiation protein RCD1 homolog isoform X2 OS=Juglans regia OX=51240 GN=LOC108993937 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 4.7e-95
Identity = 183/196 (93.37%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MANLPQSLSMNAAFGGPGPSIPGATGAPPNKERKMASSEQLVLDLSNPDLRENALLELSK 60
           M+NLPQSLSMNA FGGP  S+P A GAP NK+RKMAS+E LVLDLSNP+LRENALLELSK
Sbjct: 1   MSNLPQSLSMNAPFGGPSVSVPSAPGAPANKDRKMASAEHLVLDLSNPELRENALLELSK 60

Query: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHS 120
           KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASH 
Sbjct: 61  KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP 120

Query: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180
           DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
Sbjct: 121 DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII 180

Query: 181 PLCLRTMEMGSELSKT 197
           PLCLRTMEMGSELSKT
Sbjct: 181 PLCLRTMEMGSELSKT 196

The following BLAST results are available for this feature:

BLAST of MELO3C013140.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139793.1	2.7e-102	100.00	PREDICTED: cell differentiation protein RCD1 homolog [Cucumis sativus] >XP_00844...	[more]
XP_022940835.1	1.1e-98	96.97	CCR4-NOT transcription complex subunit 9-like [Cucurbita moschata]	[more]
XP_022139599.1	5.2e-98	95.92	CCR4-NOT transcription complex subunit 9 isoform X2 [Momordica charantia]	[more]
XP_012070881.1	1.1e-95	94.39	cell differentiation protein RCD1 homolog isoform X1 [Jatropha curcas] >KDP39170...	[more]
XP_022936269.1	1.4e-95	94.95	CCR4-NOT transcription complex subunit 9-like [Cucurbita moschata] >XP_023535704...	[more]

BLAST of MELO3C013140.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20800.1	5.6e-94	89.80	Cell differentiation, Rcd1-like protein	[more]
AT5G12980.1	8.6e-79	76.77	Cell differentiation, Rcd1-like protein	[more]
AT2G32550.1	3.0e-15	33.53	Cell differentiation, Rcd1-like protein	[more]

BLAST of MELO3C013140.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6IP65\|CNOT9_XENLA	6.4e-63	72.73	CCR4-NOT transcription complex subunit 9 OS=Xenopus laevis OX=8355 GN=cnot9 PE=2...	[more]
sp\|Q6P819\|CNOT9_XENTR	6.4e-63	72.73	CCR4-NOT transcription complex subunit 9 OS=Xenopus tropicalis OX=8364 GN=cnot9 ...	[more]
sp\|A7MB47\|CNOT9_BOVIN	1.8e-62	72.16	CCR4-NOT transcription complex subunit 9 OS=Bos taurus OX=9913 GN=CNOT9 PE=2 SV=...	[more]
sp\|Q92600\|CNOT9_HUMAN	1.8e-62	72.16	CCR4-NOT transcription complex subunit 9 OS=Homo sapiens OX=9606 GN=CNOT9 PE=1 S...	[more]
sp\|Q4R347\|CNOT9_MACFA	1.8e-62	72.16	CCR4-NOT transcription complex subunit 9 OS=Macaca fascicularis OX=9541 GN=CNOT9...	[more]

BLAST of MELO3C013140.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BI21\|A0A1S3BI21_CUCME	1.8e-102	100.00	cell differentiation protein RCD1 homolog OS=Cucumis melo OX=3656 GN=LOC10349013...	[more]
tr\|A0A0A0K791\|A0A0A0K791_CUCSA	1.8e-102	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G214190 PE=4 SV=1	[more]
tr\|A0A067L3U6\|A0A067L3U6_JATCU	7.2e-96	94.39	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00927 PE=4 SV=1	[more]
tr\|A0A2P4H0T5\|A0A2P4H0T5_QUESU	2.7e-95	93.88	Cell differentiation protein rcd1 like OS=Quercus suber OX=58331 GN=CFP56_26785 ...	[more]
tr\|A0A2I4EYS8\|A0A2I4EYS8_9ROSI	4.7e-95	93.37	cell differentiation protein RCD1 homolog isoform X2 OS=Juglans regia OX=51240 G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006402	mRNA catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0000932	cytoplasmic mRNA processing body
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013140.2.1	MELO3C013140.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF04078	Rcd1	coord: 41..196 e-value: 9.0E-79 score: 264.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..39
None	No IPR available	PANTHER	PTHR12262:SF8	CELL DIFFERENTIATION, RCD1-LIKE PROTEIN	coord: 1..197
None	No IPR available	PANTHER	PTHR12262	UNCHARACTERIZED	coord: 1..197
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 30..200 e-value: 2.7E-83 score: 280.9
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 43..190

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C013140.2	Csa7G214190	Cucumber (Chinese Long) v2	cumedB513
MELO3C013140.2	CSPI07G09990	Wild cucumber (PI 183967)	cpimedB527
MELO3C013140.2	CmaCh09G009640	Cucurbita maxima (Rimu)	cmamedB019
MELO3C013140.2	CmoCh09G009650	Cucurbita moschata (Rifu)	cmomedB007
MELO3C013140.2	CmoCh01G011650	Cucurbita moschata (Rifu)	cmomedB443
MELO3C013140.2	Lsi02G018900	Bottle gourd (USVL1VR-Ls)	lsimedB196
MELO3C013140.2	Cp4.1LG06g08780	Cucurbita pepo (Zucchini)	cpemedB847
MELO3C013140.2	Cp4.1LG02g00950	Cucurbita pepo (Zucchini)	cpemedB595
MELO3C013140.2	CsGy7G009480	Cucumber (Gy14) v2	cgybmedB469
MELO3C013140.2	Cla016309	Watermelon (97103) v1	medwmB200
MELO3C013140.2	ClCG09G010980	Watermelon (Charleston Gray)	medwcgB175
MELO3C013140.2	Bhi09G001400	Wax gourd	medwgoB256
MELO3C013140.2	Carg22372	Silver-seed gourd	carmedB0880
MELO3C013140.2	Carg12833	Silver-seed gourd	carmedB0897
MELO3C013140.2	CsaV3_7G022000	Cucumber (Chinese Long) v3	cucmedB540

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C013140.2	Cucurbita maxima (Rimu)	cmamedB455
MELO3C013140.2	Watermelon (97103) v2	medwmbB214