CmaCh09G006690 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATTTCCAGGAGTGGAACCCAAATGAGCAGCGGGTTCAACTTCACGGGCTTCTACGCCACCTGGTTTGACCATCTCCGCCACCTCATCCACCAGCTTTCCTCCACCACCACCGCCGCCAAAGAAAACCGCTCCTCCACCACCGATGACCTCCGCCACCTCGTCCACACTGTCATGTCCCACTACAGCGATTACTACCACGTCAAGTCCCTCGCCGCCGAGCGCGACCCTCTCTCCGTCTTCTCCGCTCCTTGGGCTACCTCTCTCGAACGCTCCCTCCACTGGATCGCCGGCTGGCGACCCACCACCACTTTTCATCTCATCTACACTGAATCCTCCATCCTTTTTGAATCACGCATCGTTGATATTCTCCATGGGCTTCGAACCGGCGACCTCGGTGACCTCTCCCCTTCTCAGTTTTGCCGTGTTAGCGAGCTTCAATGCCAAACTGTAAGCCCCTAACCCCCTTTTGCTTAATTTTTCCTTGCATTTCTTTTTTCAATTTCCTTTTTTTAATACTCTTTAAAACACCCCAATAATTTTCAAAATTGTATAGAAATGAAAACCCAGATTTTGAATTCTTAATTCTTAAGTGGAAAAATAACATACACATCCGTTACCGTAGTCCCAAATGGGTTAATTTAGGGAATGATGCCGAGTTTATAGTGTCAAATAAATTGTTTATTTTGTTCAAGGGCTCTAAAGAACGAATCGAGTCTCAATTAATGGGTGGTTATTCGACTTCAAGTGTCGAACAAATAAGTTGTGAGCCTTGAAAGTGTAGGCTCAAGTGTAGAAAAAAGAAGTCATGGGCCAAAGTGACTTAATGCACTTCCTTCAAGGGCTTCAAAAAATGAGTCAAACCTCGATTAATGGGTATTGAGGAGGCTTTATAGTGTACTTGTTCGGGAAGACTGTTGGGTGGGTCTCGTTTAAAATCGCTTAGAGCTTATACGGACAGTATTATATCATTCTCTGTCGAGTCGACAGAGTCGTGATTACTGACCAACCTTTGGAACTAAACAAGAACAGTCATCAAACATAAAAAAAAAAAAAAAAAAAAAAAAGAATTTGGGGTGTAGTTTTTTTGTTGAAGGGCGGTGGGAAATGTTTGGTAGGTGGAGGAGGAGAATGCAATAACGGACGAGCTGTCGGAGTGGCAAGACAACGTGAGCGAGCTAATCGGAACGAGGACGGAACTGACGGAGAAAGTGGAAGGTCTGGTGAGCATTATAAAGAAAGCCGACGATCTACGGCTGAGGACAGTGCAGAAGGTGGTGGAGCTTCTCACACCAAAGCAAGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTCGGCGTTCGGGGATGGGGGCTGAATCAGGACCGTGAACGGAGCAATAATCGCGACGGTAACTAAAACAAACATTAAACTTCCCGAAAAAGCAACCAAAAAACAGAGATTTGCTAATATATTTATGAATATTAATCTTCTTACAGAACTTGATCGGAAAAAATGAAGCCTTTCAGTGTTCTATAACATAATTTAAATAAATTTTATTTTTGTTCTTTAATTGTCTGAATAATTATCACCTAAATATTTAATACAGTGGTAATCTTTGAGATGACACGTGGCGGACATGCAGATATGAGTTCCTGACGTGACGTGGGCAGTTAAGTCGACGTCAGAAACTCAATAATGAAAAGTTTAATGAATTATGTTAGCTTTAATTTATTAATTTTATATTTATTAGATTTTCCCTAATACCTATGATATTATTAAAATAATTAAGAAGAATCTATTATAATTTGATATGAAATTAAAATTTTATATCAAATCTATAACGATGTTACAAGAGGCCGTGGGGATCAATCTGATCTTACAATCCACTCCTCTTGATGGGTCAGTTCGTGCTCTCTCAAGGAGCCCGACGCCTCCGTCTGCTCATATCGAGCATGACAATCTAAGCAGTGGGGATCAATCTTCATGTCCATTTCGTGCCCTGGATTTTACAATTCACTCCTTTTGAGGGACCAGGTCGTGCTCTCCCAAGAGGCCTGATGCCCCCGTCTGCTCTTAGCAAGCATGGCAATCTTGGTCTGCTCTTAGCGAGCATGGCAATCTTGCTTCCTTCAGCCGTGGGGATCAATCTTCATGTCTAGGGGTCAGTTCGTGCTCTCTCAAGAGGCTCGACGCCTCCGTCTGCTCATAGCGAGCATGACAATCTTGGTTTGCTTCATGGCAATCTTGCTTCCTTTCGTGGGGATCAATCTTCATGTCCATCTCGAGCTGTGGGGTTCATGTCCATCTCGAGCTCTAGAATAGGTCATCATTCACAAGCTAGTCTGTGAAATCTAAGATATAATGTAATAGCTTAAGTTCACAACTAAATAAAATAAATATAGTATGCTTTTATCAAAAA TAATTTCCAGGAGTGGAACCCAAATGAGCAGCGGGTTCAACTTCACGGGCTTCTACGCCACCTGGTTTGACCATCTCCGCCACCTCATCCACCAGCTTTCCTCCACCACCACCGCCGCCAAAGAAAACCGCTCCTCCACCACCGATGACCTCCGCCACCTCGTCCACACTGTCATGTCCCACTACAGCGATTACTACCACGTCAAGTCCCTCGCCGCCGAGCGCGACCCTCTCTCCGTCTTCTCCGCTCCTTGGGCTACCTCTCTCGAACGCTCCCTCCACTGGATCGCCGGCTGGCGACCCACCACCACTTTTCATCTCATCTACACTGAATCCTCCATCCTTTTTGAATCACGCATCGTTGATATTCTCCATGGGCTTCGAACCGGCGACCTCGGTGACCTCTCCCCTTCTCAGTTTTGCCGTGTTAGCGAGCTTCAATGCCAAACTGTGGAGGAGGAGAATGCAATAACGGACGAGCTGTCGGAGTGGCAAGACAACGTGAGCGAGCTAATCGGAACGAGGACGGAACTGACGGAGAAAGTGGAAGGTCTGGTGAGCATTATAAAGAAAGCCGACGATCTACGGCTGAGGACAGTGCAGAAGGTGGTGGAGCTTCTCACACCAAAGCAAGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTCGGCGTTCGGGGATGGGGGCTGAATCAGGACCGTGAACGGAGCAATAATCGCGACGGTAACTAAAACAAACATTAAACTTCCCGAAAAAGCAACCAAAAAACAGAGATTTGCTAATATATTTATGAATATTAATCTTCTTACAGAACTTGATCGGAAAAAATGAAGCCTTTCAGTGTTCTATAACATAATTTAAATAAATTTTATTTTTGTTCTTTAATTGTCTGAATAATTATCACCTAAATATTTAATACAGTGGTAATCTTTGAGATGACACGTGGCGGACATGCAGATATGAGTTCCTGACGTGACGTGGGCAGTTAAGTCGACGTCAGAAACTCAATAATGAAAAGTTTAATGAATTATGTTAGCTTTAATTTATTAATTTTATATTTATTAGATTTTCCCTAATACCTATGATATTATTAAAATAATTAAGAAGAATCTATTATAATTTGATATGAAATTAAAATTTTATATCAAATCTATAACGATGTTACAAGAGGCCGTGGGGATCAATCTGATCTTACAATCCACTCCTCTTGATGGGTCAGTTCGTGCTCTCTCAAGGAGCCCGACGCCTCCGTCTGCTCATATCGAGCATGACAATCTAAGCAGTGGGGATCAATCTTCATGTCCATTTCGTGCCCTGGATTTTACAATTCACTCCTTTTGAGGGACCAGGTCGTGCTCTCCCAAGAGGCCTGATGCCCCCGTCTGCTCTTAGCAAGCATGGCAATCTTGGTCTGCTCTTAGCGAGCATGGCAATCTTGCTTCCTTCAGCCGTGGGGATCAATCTTCATGTCTAGGGGTCAGTTCGTGCTCTCTCAAGAGGCTCGACGCCTCCGTCTGCTCATAGCGAGCATGACAATCTTGGTTTGCTTCATGGCAATCTTGCTTCCTTTCGTGGGGATCAATCTTCATGTCCATCTCGAGCTGTGGGGTTCATGTCCATCTCGAGCTCTAGAATAGGTCATCATTCACAAGCTAGTCTGTGAAATCTAAGATATAATGTAATAGCTTAAGTTCACAACTAAATAAAATAAATATAGTATGCTTTTATCAAAAA ATGAGCAGCGGGTTCAACTTCACGGGCTTCTACGCCACCTGGTTTGACCATCTCCGCCACCTCATCCACCAGCTTTCCTCCACCACCACCGCCGCCAAAGAAAACCGCTCCTCCACCACCGATGACCTCCGCCACCTCGTCCACACTGTCATGTCCCACTACAGCGATTACTACCACGTCAAGTCCCTCGCCGCCGAGCGCGACCCTCTCTCCGTCTTCTCCGCTCCTTGGGCTACCTCTCTCGAACGCTCCCTCCACTGGATCGCCGGCTGGCGACCCACCACCACTTTTCATCTCATCTACACTGAATCCTCCATCCTTTTTGAATCACGCATCGTTGATATTCTCCATGGGCTTCGAACCGGCGACCTCGGTGACCTCTCCCCTTCTCAGTTTTGCCGTGTTAGCGAGCTTCAATGCCAAACTGTGGAGGAGGAGAATGCAATAACGGACGAGCTGTCGGAGTGGCAAGACAACGTGAGCGAGCTAATCGGAACGAGGACGGAACTGACGGAGAAAGTGGAAGGTCTGGTGAGCATTATAAAGAAAGCCGACGATCTACGGCTGAGGACAGTGCAGAAGGTGGTGGAGCTTCTCACACCAAAGCAAGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTCGGCGTTCGGGGATGGGGGCTGAATCAGGACCGTGAACGGAGCAATAATCGCGACGGTAACTAA MSSGFNFTGFYATWFDHLRHLIHQLSSTTTAAKENRSSTTDDLRHLVHTVMSHYSDYYHVKSLAAERDPLSVFSAPWATSLERSLHWIAGWRPTTTFHLIYTESSILFESRIVDILHGLRTGDLGDLSPSQFCRVSELQCQTVEEENAITDELSEWQDNVSELIGTRTELTEKVEGLVSIIKKADDLRLRTVQKVVELLTPKQAVEFLIAAAELQFGVRGWGLNQDRERSNNRDGN
BLAST of CmaCh09G006690 vs. Swiss-Prot
Match: HBP1C_WHEAT (Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13 Identity = 54/203 (26.60%), Postives = 101/203 (49.75%), Query Frame = 1
BLAST of CmaCh09G006690 vs. Swiss-Prot
Match: TGA1_ARATH (Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 3.9e-13 Identity = 51/174 (29.31%), Postives = 87/174 (50.00%), Query Frame = 1
BLAST of CmaCh09G006690 vs. Swiss-Prot
Match: TGA5_ARATH (Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2) HSP 1 Score: 73.9 bits (180), Expect = 2.6e-12 Identity = 57/200 (28.50%), Postives = 99/200 (49.50%), Query Frame = 1
BLAST of CmaCh09G006690 vs. Swiss-Prot
Match: HBP1B_WHEAT (Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 7.4e-12 Identity = 54/210 (25.71%), Postives = 98/210 (46.67%), Query Frame = 1
BLAST of CmaCh09G006690 vs. Swiss-Prot
Match: TGA4_ARATH (Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 9.7e-12 Identity = 62/216 (28.70%), Postives = 102/216 (47.22%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TrEMBL
Match: A0A0A0L389_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625020 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 1.7e-100 Identity = 192/231 (83.12%), Postives = 208/231 (90.04%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TrEMBL
Match: M5WXN5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022280mg PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 3.6e-82 Identity = 160/233 (68.67%), Postives = 188/233 (80.69%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TrEMBL
Match: W9QBE8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004349 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 6.9e-81 Identity = 157/233 (67.38%), Postives = 183/233 (78.54%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TrEMBL
Match: A0A061FFR7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031867 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.8e-79 Identity = 150/222 (67.57%), Postives = 180/222 (81.08%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TrEMBL
Match: A0A0D2S6Y9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G271700 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 7.1e-78 Identity = 148/228 (64.91%), Postives = 184/228 (80.70%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TAIR10
Match: AT3G14880.1 (AT3G14880.1 BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1)) HSP 1 Score: 243.8 bits (621), Expect = 1.1e-64 Identity = 122/234 (52.14%), Postives = 165/234 (70.51%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TAIR10
Match: AT4G18650.1 (AT4G18650.1 transcription factor-related) HSP 1 Score: 98.6 bits (244), Expect = 5.5e-21 Identity = 67/233 (28.76%), Postives = 112/233 (48.07%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TAIR10
Match: AT4G18690.1 (AT4G18690.1 unknown protein) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20 Identity = 64/247 (25.91%), Postives = 119/247 (48.18%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TAIR10
Match: AT4G18680.1 (AT4G18680.1 unknown protein) HSP 1 Score: 92.4 bits (228), Expect = 3.9e-19 Identity = 59/201 (29.35%), Postives = 104/201 (51.74%), Query Frame = 1
BLAST of CmaCh09G006690 vs. TAIR10
Match: AT5G45830.1 (AT5G45830.1 delay of germination 1) HSP 1 Score: 81.6 bits (200), Expect = 6.9e-16 Identity = 58/245 (23.67%), Postives = 108/245 (44.08%), Query Frame = 1
BLAST of CmaCh09G006690 vs. NCBI nr
Match: gi|449456699|ref|XP_004146086.1| (PREDICTED: transcription factor HBP-1b(c38) [Cucumis sativus]) HSP 1 Score: 373.6 bits (958), Expect = 2.5e-100 Identity = 192/231 (83.12%), Postives = 208/231 (90.04%), Query Frame = 1
BLAST of CmaCh09G006690 vs. NCBI nr
Match: gi|659127555|ref|XP_008463763.1| (PREDICTED: transcription factor TGA5 [Cucumis melo]) HSP 1 Score: 369.4 bits (947), Expect = 4.7e-99 Identity = 190/233 (81.55%), Postives = 203/233 (87.12%), Query Frame = 1
BLAST of CmaCh09G006690 vs. NCBI nr
Match: gi|1009161847|ref|XP_015899114.1| (PREDICTED: transcription factor TGA7, partial [Ziziphus jujuba]) HSP 1 Score: 333.2 bits (853), Expect = 3.7e-88 Identity = 166/226 (73.45%), Postives = 192/226 (84.96%), Query Frame = 1
BLAST of CmaCh09G006690 vs. NCBI nr
Match: gi|595884135|ref|XP_007212919.1| (hypothetical protein PRUPE_ppa022280mg [Prunus persica]) HSP 1 Score: 312.8 bits (800), Expect = 5.2e-82 Identity = 160/233 (68.67%), Postives = 188/233 (80.69%), Query Frame = 1
BLAST of CmaCh09G006690 vs. NCBI nr
Match: gi|657988198|ref|XP_008386261.1| (PREDICTED: transcription factor TGA5-like [Malus domestica]) HSP 1 Score: 312.0 bits (798), Expect = 8.9e-82 Identity = 159/230 (69.13%), Postives = 185/230 (80.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |