CmaCh03G002300 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G002300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Photosystem I P700 chlorophyll a apoprotein A2
Location	Cma_Chr03 : 3417988 .. 3418779 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCGCATGACTTCGAAAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCGCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAATCTCTTTCATGTAGCTTGGCAAGGCAATTTTGAAGCATGGGTACAAGACCCTTTACATGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCGGCCGTCGAAGCTTTTACTCGAGGGGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGTACTAATGGGGATCTTTATACGGGAGCTCTTTTTCTATTATTTCTTTCTGCCATATCTTTAATAGCGGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCGTGGTTTAAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGCCATTTAATCCATGTCGCTATTCCTGCATCCAGGGGAGAATATGTTCGATGGAATAATTTCTTAGATGTATTGCCACATCCCCAAGGATTAGGACCACTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAATAATCATTTATTTGGTACTTCCGAATGAGCAGGAACTGCCATTCTAACCCTTCTCGGGGGATTCCGGCATTAG

mRNA sequence

ATGGCACTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCGCATGACTTCGAAAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCGCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAATCTCTTTCATGTAGCTTGGCAAGGCAATTTTGAAGCATGGGTACAAGACCCTTTACATGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCGGCCGTCGAAGCTTTTACTCGAGGGGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGTACTAATGGGGATCTTTATACGGGAGCTCTTTTTCTATTATTTCTTTCTGCCATATCTTTAATAGCGGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCGTGGTTTAAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGCCATTTAATCCATGTCGCTATTCCTGCATCCAGGGGAGAATATGTTCGATGGAATAATTTCTTAGATGTATTGCCACATCCCCAAGGATTAGGACCACTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAATAATCATTTATTTGGAACTGCCATTCTAACCCTTCTCGGGGGATTCCGGCATTAG

Coding sequence (CDS)

ATGGCACTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCGCATGACTTCGAAAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCGCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAATCTCTTTCATGTAGCTTGGCAAGGCAATTTTGAAGCATGGGTACAAGACCCTTTACATGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCGGCCGTCGAAGCTTTTACTCGAGGGGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGTACTAATGGGGATCTTTATACGGGAGCTCTTTTTCTATTATTTCTTTCTGCCATATCTTTAATAGCGGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCGTGGTTTAAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGCCATTTAATCCATGTCGCTATTCCTGCATCCAGGGGAGAATATGTTCGATGGAATAATTTCTTAGATGTATTGCCACATCCCCAAGGATTAGGACCACTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAATAATCATTTATTTGGAACTGCCATTCTAACCCTTCTCGGGGGATTCCGGCATTAG

Protein sequence

MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTAILTLLGGFRH

Homology

[Close]

BLAST of CmaCh03G002300 vs. Swiss-Prot
Match: PSAB_CUCSA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus GN=psaB PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 2.8e-153
Identity = 253/261 (96.93%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGE VRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. Swiss-Prot
Match: PSAB_EUCGG (Photosystem I P700 chlorophyll a apoprotein A2 OS=Eucalyptus globulus subsp. globulus GN=psaB PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 5.2e-152
Identity = 250/261 (95.79%), Postives = 253/261 (96.93%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIP SRGEYVRWNNFLDVLPHP+GLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLDVLPHPEGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           +HLF      GTAILTLLGGF
Sbjct: 241 SHLFGTSQGSGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. Swiss-Prot
Match: PSAB_TOBAC (Photosystem I P700 chlorophyll a apoprotein A2 OS=Nicotiana tabacum GN=psaB PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 6.8e-152
Identity = 250/261 (95.79%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFE+WVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDS+
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSS 240

Query: 241 NHLF------GTAILTLLGGF 256
           +HLF      GTAILTLLGGF
Sbjct: 241 SHLFGTAQGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. Swiss-Prot
Match: PSAB_MORIN (Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica GN=psaB PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 6.8e-152
Identity = 249/261 (95.40%), Postives = 253/261 (96.93%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLY GALFLLF+SAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYNGALFLLFISAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIP SRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDS+
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSS 240

Query: 241 NHLF------GTAILTLLGGF 256
           +HLF      GTAILTLLGGF
Sbjct: 241 SHLFGNSQGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. Swiss-Prot
Match: PSAB_PELHO (Photosystem I P700 chlorophyll a apoprotein A2 OS=Pelargonium hortorum GN=psaB PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 6.8e-152
Identity = 250/261 (95.79%), Postives = 253/261 (96.93%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGEYVRWNNFLDVLPHP+GLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPHPRGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           +H F      GTAILTLLGGF
Sbjct: 241 SHFFGTSQGSGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. TrEMBL
Match: A0A0S2IEP4_9ROSI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita ecuadorensis GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. TrEMBL
Match: A0A0S2IFT2_9ROSI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita okeechobeensis GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. TrEMBL
Match: A0A0S2IGA2_CUCPE (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita pepo subsp. ovifera GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. TrEMBL
Match: A0A0S2IEM8_9ROSI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita digitata GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. TrEMBL
Match: A0A0S2IF85_9ROSI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita ficifolia GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. TAIR10
Match: ATCG00340.1 (ATCG00340.1 Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 531.2 bits (1367), Expect = 3.6e-151
Identity = 246/261 (94.25%), Postives = 251/261 (96.17%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFE WVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFETWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTN DLYTGALFLLFLSA+SLI GWLHLQPKWKP VSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNEDLYTGALFLLFLSALSLIGGWLHLQPKWKPRVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGEYVRWNNFL+VLPHPQGLGPLFTGQWNLYAQNPDS+
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLNVLPHPQGLGPLFTGQWNLYAQNPDSS 240

Query: 241 NHLF------GTAILTLLGGF 256
           +HLF      GTAILTLLGGF
Sbjct: 241 SHLFGTSQGSGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. TAIR10
Match: ATCG00350.1 (ATCG00350.1 Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 171.0 bits (432), Expect = 9.4e-43
Identity = 99/253 (39.13%), Postives = 136/253 (53.75%), Query Frame = 1


Query: 8   FSQGLAQDP-TTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLF 67
           FS+ +A+ P TT  IW   A AHDF+SH    EE + + +F++HFGQL+IIFLW SG  F
Sbjct: 32  FSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEE-ISRKVFSAHFGQLSIIFLWLSGMYF 91

Query: 68  HVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYT 127
           H A   N+EAW+ DP H+ P A  +W P  GQ  +     GG  G + I  SG +Q W  
Sbjct: 92  HGARFSNYEAWLSDPTHIGPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 151

Query: 128 IGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVS 187
            G+ +   LY  A+  L  +A+ L AGW H   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 152 SGITSELQLYCTAIGALVFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGLG 211

Query: 188 SLAWTGHLIHVAIPASRGEYVRWNNFLDV--------LPH----------------PQGL 236
           SL+W GH +HV++P         N FL+         LPH                 +G 
Sbjct: 212 SLSWAGHQVHVSLPI--------NQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGA 271

[Close]

BLAST of CmaCh03G002300 vs. NCBI nr
Match: gi|952954349|gb|ALO21713.1| (PsaB (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 546.2 bits (1406), Expect = 3.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. NCBI nr
Match: gi|595645219|gb|AHM88682.1| (photosystem I P700 apoprotein A2 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 545.8 bits (1405), Expect = 4.0e-152
Identity = 254/261 (97.32%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. NCBI nr
Match: gi|1002166162|ref|YP_009236279.1| (photosystem I P700 apoprotein A2 (chloroplast) [Gynostemma pentaphyllum])

HSP 1 Score: 543.1 bits (1398), Expect = 2.6e-151
Identity = 252/261 (96.55%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIF+SHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFSSHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIP SRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSQGVGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. NCBI nr
Match: gi|317046172|ref|YP_004072461.1| (PSI P700 apoprotein A2 [Corynocarpus laevigata])

HSP 1 Score: 543.1 bits (1398), Expect = 2.6e-151
Identity = 252/261 (96.55%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIP +RGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPGARGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSQGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300 vs. NCBI nr
Match: gi|68164802|ref|YP_247598.1| (photosystem I P700 chlorophyll a apoprotein A2 [Cucumis sativus])

HSP 1 Score: 542.3 bits (1396), Expect = 4.4e-151
Identity = 253/261 (96.93%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGE VRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

The following BLAST results are available for this feature:

BLAST of CmaCh03G002300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSAB_CUCSA	2.8e-153	96.93	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus GN=psaB PE=3 S...	[more]
PSAB_EUCGG	5.2e-152	95.79	Photosystem I P700 chlorophyll a apoprotein A2 OS=Eucalyptus globulus subsp. glo...	[more]
PSAB_TOBAC	6.8e-152	95.79	Photosystem I P700 chlorophyll a apoprotein A2 OS=Nicotiana tabacum GN=psaB PE=3...	[more]
PSAB_MORIN	6.8e-152	95.40	Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica GN=psaB PE=3 SV=1	[more]
PSAB_PELHO	6.8e-152	95.79	Photosystem I P700 chlorophyll a apoprotein A2 OS=Pelargonium hortorum GN=psaB P...	[more]

BLAST of CmaCh03G002300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IEP4_9ROSI	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita ecuadorensis GN=psaB...	[more]
A0A0S2IFT2_9ROSI	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita okeechobeensis GN=ps...	[more]
A0A0S2IGA2_CUCPE	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita pepo subsp. ovifera ...	[more]
A0A0S2IEM8_9ROSI	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita digitata GN=psaB PE=...	[more]
A0A0S2IF85_9ROSI	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita ficifolia GN=psaB PE...	[more]

BLAST of CmaCh03G002300 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00340.1	3.6e-151	94.25	ATCG00340.1 Photosystem I, PsaA/PsaB protein	[more]
ATCG00350.1	9.4e-43	39.13	ATCG00350.1 Photosystem I, PsaA/PsaB protein	[more]

BLAST of CmaCh03G002300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|952954349\|gb\|ALO21713.1\|	3.1e-152	97.70	PsaB (plastid) [Cucurbita argyrosperma]	[more]
gi\|595645219\|gb\|AHM88682.1\|	4.0e-152	97.32	photosystem I P700 apoprotein A2 (chloroplast) [Lagenaria siceraria]	[more]
gi\|1002166162\|ref\|YP_009236279.1\|	2.6e-151	96.55	photosystem I P700 apoprotein A2 (chloroplast) [Gynostemma pentaphyllum]	[more]
gi\|317046172\|ref\|YP_004072461.1\|	2.6e-151	96.55	PSI P700 apoprotein A2 [Corynocarpus laevigata]	[more]
gi\|68164802\|ref\|YP_247598.1\|	4.4e-151	96.93	photosystem I P700 chlorophyll a apoprotein A2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001280	PSI_PsaA/B

Vocabulary: **Cellular Component**
Term	Definition
GO:0009522	photosystem I
GO:0009579	thylakoid
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0015979	photosynthesis
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G002300.1	CmaCh03G002300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PRINTS	PR00257	PHOTSYSPSAAB	coord: 135..159 score: 1.5E-36coord: 46..69 score: 1.5E-36coord: 175..199 score: 1.5
IPR001280	Photosystem I PsaA/PsaB	GENE3D	G3DSA:1.20.1130.10		coord: 4..248 score: 4.1E
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 8..255 score: 1.4
IPR001280	Photosystem I PsaA/PsaB	unknown	SSF81558	Photosystem I subunits PsaA/PsaB	coord: 4..255 score: 1.16
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 3..238 score: 1.4E
None	No IPR available	PANTHER	PTHR30128:SF4	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2	coord: 3..238 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G002300	Silver-seed gourd	carcmaB0887
CmaCh03G002300	Cucumber (Chinese Long) v3	cmacucB0792
CmaCh03G002300	Wax gourd	cmawgoB0799
CmaCh03G002300	Watermelon (97103) v2	cmawmbB690
CmaCh03G002300	Cucurbita maxima (Rimu)	cmacmaB524
CmaCh03G002300	Cucumber (Gy14) v1	cgycmaB0918
CmaCh03G002300	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G002300	Cucurbita moschata (Rifu)	cmacmoB668
CmaCh03G002300	Wild cucumber (PI 183967)	cmacpiB672
CmaCh03G002300	Cucumber (Chinese Long) v2	cmacuB664
CmaCh03G002300	Melon (DHL92) v3.5.1	cmameB610
CmaCh03G002300	Watermelon (Charleston Gray)	cmawcgB591
CmaCh03G002300	Watermelon (97103) v1	cmawmB640
CmaCh03G002300	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G002300	Cucurbita pepo (Zucchini)	cmacpeB672
CmaCh03G002300	Bottle gourd (USVL1VR-Ls)	cmalsiB601
CmaCh03G002300	Cucumber (Gy14) v2	cgybcmaB529
CmaCh03G002300	Melon (DHL92) v3.6.1	cmamedB693