CmaCh03G002300.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G002300.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Photosystem I P700 chlorophyll a apoprotein A2
Location	Cma_Chr03 : 3417988 .. 3418779 (+)
Sequence length	774

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCGCATGACTTCGAAAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCGCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAATCTCTTTCATGTAGCTTGGCAAGGCAATTTTGAAGCATGGGTACAAGACCCTTTACATGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCGGCCGTCGAAGCTTTTACTCGAGGGGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGTACTAATGGGGATCTTTATACGGGAGCTCTTTTTCTATTATTTCTTTCTGCCATATCTTTAATAGCGGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCGTGGTTTAAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGCCATTTAATCCATGTCGCTATTCCTGCATCCAGGGGAGAATATGTTCGATGGAATAATTTCTTAGATGTATTGCCACATCCCCAAGGATTAGGACCACTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAATAATCATTTATTTGGTACTTCCGAATGAGCAGGAACTGCCATTCTAACCCTTCTCGGGGGATTCCGGCATTAG

mRNA sequence

ATGGCACTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCGCATGACTTCGAAAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCGCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAATCTCTTTCATGTAGCTTGGCAAGGCAATTTTGAAGCATGGGTACAAGACCCTTTACATGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCGGCCGTCGAAGCTTTTACTCGAGGGGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGTACTAATGGGGATCTTTATACGGGAGCTCTTTTTCTATTATTTCTTTCTGCCATATCTTTAATAGCGGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCGTGGTTTAAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGCCATTTAATCCATGTCGCTATTCCTGCATCCAGGGGAGAATATGTTCGATGGAATAATTTCTTAGATGTATTGCCACATCCCCAAGGATTAGGACCACTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAATAATCATTTATTTGGAACTGCCATTCTAACCCTTCTCGGGGGATTCCGGCATTAG

Coding sequence (CDS)

ATGGCACTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCGCATGACTTCGAAAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCGCATTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAATCTCTTTCATGTAGCTTGGCAAGGCAATTTTGAAGCATGGGTACAAGACCCTTTACATGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCGGCCGTCGAAGCTTTTACTCGAGGGGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGTACTAATGGGGATCTTTATACGGGAGCTCTTTTTCTATTATTTCTTTCTGCCATATCTTTAATAGCGGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCGTGGTTTAAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGCCATTTAATCCATGTCGCTATTCCTGCATCCAGGGGAGAATATGTTCGATGGAATAATTTCTTAGATGTATTGCCACATCCCCAAGGATTAGGACCACTTTTTACAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAATAATCATTTATTTGGAACTGCCATTCTAACCCTTCTCGGGGGATTCCGGCATTAG

Protein sequence

MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSNNHLFGTAILTLLGGFRH

Homology

[Close]

BLAST of CmaCh03G002300.1 vs. Swiss-Prot
Match: PSAB_CUCSA (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus GN=psaB PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 2.8e-153
Identity = 253/261 (96.93%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGE VRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. Swiss-Prot
Match: PSAB_EUCGG (Photosystem I P700 chlorophyll a apoprotein A2 OS=Eucalyptus globulus subsp. globulus GN=psaB PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 5.2e-152
Identity = 250/261 (95.79%), Postives = 253/261 (96.93%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIP SRGEYVRWNNFLDVLPHP+GLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLDVLPHPEGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           +HLF      GTAILTLLGGF
Sbjct: 241 SHLFGTSQGSGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. Swiss-Prot
Match: PSAB_TOBAC (Photosystem I P700 chlorophyll a apoprotein A2 OS=Nicotiana tabacum GN=psaB PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 6.8e-152
Identity = 250/261 (95.79%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFE+WVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDS+
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSS 240

Query: 241 NHLF------GTAILTLLGGF 256
           +HLF      GTAILTLLGGF
Sbjct: 241 SHLFGTAQGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. Swiss-Prot
Match: PSAB_MORIN (Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica GN=psaB PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 6.8e-152
Identity = 249/261 (95.40%), Postives = 253/261 (96.93%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLY GALFLLF+SAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYNGALFLLFISAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIP SRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDS+
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSS 240

Query: 241 NHLF------GTAILTLLGGF 256
           +HLF      GTAILTLLGGF
Sbjct: 241 SHLFGNSQGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. Swiss-Prot
Match: PSAB_PELHO (Photosystem I P700 chlorophyll a apoprotein A2 OS=Pelargonium hortorum GN=psaB PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 6.8e-152
Identity = 250/261 (95.79%), Postives = 253/261 (96.93%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTN DLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGEYVRWNNFLDVLPHP+GLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPHPRGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           +H F      GTAILTLLGGF
Sbjct: 241 SHFFGTSQGSGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. TrEMBL
Match: A0A0S2IEP4_9ROSI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita ecuadorensis GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. TrEMBL
Match: A0A0S2IFT2_9ROSI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita okeechobeensis GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. TrEMBL
Match: A0A0S2IGA2_CUCPE (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita pepo subsp. ovifera GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. TrEMBL
Match: A0A0S2IEM8_9ROSI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita digitata GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. TrEMBL
Match: A0A0S2IF85_9ROSI (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita ficifolia GN=psaB PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. TAIR10
Match: ATCG00340.1 (ATCG00340.1 Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 531.2 bits (1367), Expect = 3.6e-151
Identity = 246/261 (94.25%), Postives = 251/261 (96.17%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFE WVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFETWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTN DLYTGALFLLFLSA+SLI GWLHLQPKWKP VSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNEDLYTGALFLLFLSALSLIGGWLHLQPKWKPRVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGEYVRWNNFL+VLPHPQGLGPLFTGQWNLYAQNPDS+
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLNVLPHPQGLGPLFTGQWNLYAQNPDSS 240

Query: 241 NHLF------GTAILTLLGGF 256
           +HLF      GTAILTLLGGF
Sbjct: 241 SHLFGTSQGSGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. TAIR10
Match: ATCG00350.1 (ATCG00350.1 Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 171.0 bits (432), Expect = 9.4e-43
Identity = 99/253 (39.13%), Postives = 136/253 (53.75%), Query Frame = 1


Query: 8   FSQGLAQDP-TTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLF 67
           FS+ +A+ P TT  IW   A AHDF+SH    EE + + +F++HFGQL+IIFLW SG  F
Sbjct: 32  FSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEE-ISRKVFSAHFGQLSIIFLWLSGMYF 91

Query: 68  HVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYT 127
           H A   N+EAW+ DP H+ P A  +W P  GQ  +     GG  G + I  SG +Q W  
Sbjct: 92  HGARFSNYEAWLSDPTHIGPSAQVVW-PIVGQEILNGDVGGGFRG-IQIT-SGFFQIWRA 151

Query: 128 IGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVS 187
            G+ +   LY  A+  L  +A+ L AGW H   K  P ++WF++ ES LNHHL+GL G+ 
Sbjct: 152 SGITSELQLYCTAIGALVFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGLG 211

Query: 188 SLAWTGHLIHVAIPASRGEYVRWNNFLDV--------LPH----------------PQGL 236
           SL+W GH +HV++P         N FL+         LPH                 +G 
Sbjct: 212 SLSWAGHQVHVSLPI--------NQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGA 271

[Close]

BLAST of CmaCh03G002300.1 vs. NCBI nr
Match: gi|952954349|gb|ALO21713.1| (PsaB (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 546.2 bits (1406), Expect = 3.1e-152
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. NCBI nr
Match: gi|595645219|gb|AHM88682.1| (photosystem I P700 apoprotein A2 (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 545.8 bits (1405), Expect = 4.0e-152
Identity = 254/261 (97.32%), Postives = 255/261 (97.70%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. NCBI nr
Match: gi|1002166162|ref|YP_009236279.1| (photosystem I P700 apoprotein A2 (chloroplast) [Gynostemma pentaphyllum])

HSP 1 Score: 543.1 bits (1398), Expect = 2.6e-151
Identity = 252/261 (96.55%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIF+SHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFSSHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIP SRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSQGVGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. NCBI nr
Match: gi|317046172|ref|YP_004072461.1| (PSI P700 apoprotein A2 [Corynocarpus laevigata])

HSP 1 Score: 543.1 bits (1398), Expect = 2.6e-151
Identity = 252/261 (96.55%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIP +RGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPGARGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSQGAGTAILTLLGGF 261

[Close]

BLAST of CmaCh03G002300.1 vs. NCBI nr
Match: gi|68164802|ref|YP_247598.1| (photosystem I P700 chlorophyll a apoprotein A2 [Cucumis sativus])

HSP 1 Score: 542.3 bits (1396), Expect = 4.4e-151
Identity = 253/261 (96.93%), Postives = 254/261 (97.32%), Query Frame = 1


Query: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60
           MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW
Sbjct: 1   MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLW 60

Query: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120
           TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV
Sbjct: 61  TSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGV 120

Query: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180
           YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS
Sbjct: 121 YQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLS 180

Query: 181 GLFGVSSLAWTGHLIHVAIPASRGEYVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240
           GLFGVSSLAWTGHL+HVAIPASRGE VRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN
Sbjct: 181 GLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQGLGPLFTGQWNLYAQNPDSN 240

Query: 241 NHLF------GTAILTLLGGF 256
           NHLF      GTAILTLLGGF
Sbjct: 241 NHLFGTSEGAGTAILTLLGGF 261

The following BLAST results are available for this feature:

BLAST of CmaCh03G002300.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSAB_CUCSA	2.8e-153	96.93	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus GN=psaB PE=3 S...	[more]
PSAB_EUCGG	5.2e-152	95.79	Photosystem I P700 chlorophyll a apoprotein A2 OS=Eucalyptus globulus subsp. glo...	[more]
PSAB_TOBAC	6.8e-152	95.79	Photosystem I P700 chlorophyll a apoprotein A2 OS=Nicotiana tabacum GN=psaB PE=3...	[more]
PSAB_MORIN	6.8e-152	95.40	Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica GN=psaB PE=3 SV=1	[more]
PSAB_PELHO	6.8e-152	95.79	Photosystem I P700 chlorophyll a apoprotein A2 OS=Pelargonium hortorum GN=psaB P...	[more]

BLAST of CmaCh03G002300.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IEP4_9ROSI	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita ecuadorensis GN=psaB...	[more]
A0A0S2IFT2_9ROSI	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita okeechobeensis GN=ps...	[more]
A0A0S2IGA2_CUCPE	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita pepo subsp. ovifera ...	[more]
A0A0S2IEM8_9ROSI	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita digitata GN=psaB PE=...	[more]
A0A0S2IF85_9ROSI	2.1e-152	97.70	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucurbita ficifolia GN=psaB PE...	[more]

BLAST of CmaCh03G002300.1 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00340.1	3.6e-151	94.25	ATCG00340.1 Photosystem I, PsaA/PsaB protein	[more]
ATCG00350.1	9.4e-43	39.13	ATCG00350.1 Photosystem I, PsaA/PsaB protein	[more]

BLAST of CmaCh03G002300.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|952954349\|gb\|ALO21713.1\|	3.1e-152	97.70	PsaB (plastid) [Cucurbita argyrosperma]	[more]
gi\|595645219\|gb\|AHM88682.1\|	4.0e-152	97.32	photosystem I P700 apoprotein A2 (chloroplast) [Lagenaria siceraria]	[more]
gi\|1002166162\|ref\|YP_009236279.1\|	2.6e-151	96.55	photosystem I P700 apoprotein A2 (chloroplast) [Gynostemma pentaphyllum]	[more]
gi\|317046172\|ref\|YP_004072461.1\|	2.6e-151	96.55	PSI P700 apoprotein A2 [Corynocarpus laevigata]	[more]
gi\|68164802\|ref\|YP_247598.1\|	4.4e-151	96.93	photosystem I P700 chlorophyll a apoprotein A2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001280	PSI_PsaA/B

Vocabulary: **Cellular Component**
Term	Definition
GO:0009522	photosystem I
GO:0009579	thylakoid
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh03G002300	CmaCh03G002300	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh03G002300.1	CmaCh03G002300.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G002300.1.exon.1	CmaCh03G002300.1.exon.1	exon
CmaCh03G002300.1.exon.2	CmaCh03G002300.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh03G002300.1.CDS.1	CmaCh03G002300.1.CDS.1	CDS
CmaCh03G002300.1.CDS.2	CmaCh03G002300.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PRINTS	PR00257	PHOTSYSPSAAB	coord: 135..159 score: 1.5E-36coord: 46..69 score: 1.5E-36coord: 175..199 score: 1.5
IPR001280	Photosystem I PsaA/PsaB	GENE3D	G3DSA:1.20.1130.10		coord: 4..248 score: 4.1E
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 8..255 score: 1.4
IPR001280	Photosystem I PsaA/PsaB	unknown	SSF81558	Photosystem I subunits PsaA/PsaB	coord: 4..255 score: 1.16
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 3..238 score: 1.4E
None	No IPR available	PANTHER	PTHR30128:SF4	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2	coord: 3..238 score: 1.4E