CmaCh00G005200 (gene) Cucurbita maxima (Rimu)

NameCmaCh00G005200
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionStAR-related lipid transfer protein 9, putative
LocationCma_Chr00 : 37842135 .. 37843714 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCACACGGGTTCTAAATCGTTGACGGCGACGGCGACAGAATGGGGAAAAGAGAAAGGCGAAAGCAGGGAAAGAGAGATGGTGGAGAACGGAGGAAGCGACGGTGGTAGTAACGCCCATTGGTGGTGGGCCTTGGCCGGCGCAACGCAGCTTGGTTGGGGTATCGCCTCTTTTCGGCGAGGAGTTATCGGCGATTCTAGCCTCATGCCCTTTAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGCTGCCTCCTCGTCCGCCATCGCTTCCTTAAAGGCCGCCGGCATCCACAAGGTTTACTTCACCTTCTTTCCTATTCTGCATCTAGTAGTTTCATTTCTTCTCCCTCCCTCCCCCTGATTTGGATTGCGTTAGAGGTTAATTGCGCAACTCTGATTAAGTTGGCTTTGAACTTGTGTCGTCCTCTGAAGAATTAACTCTCAAGCCAAATTTTATTCGTCGCATGTGGTGAATTTGGTTAATGTCTAGAAGGACATTTTGTTTAGTTTTTAACACTCAATTTGATCGAAACACTGAAACTGGAAACAATTGATCGAATCAGAATTGGCGTCCATTGATTAAGAAGAAAAATATTTTTGTAGGTTTTAGATTTTTAGGTTGTGTTGGATTCTTTGCAGCTGATATTAATAATCTTGCTGTTAATTTCGAGCATTTTCTCCCTTGGCTTGATATTGCTGTGAAATTCAGGTATATTCTTGATTGAATTTAGAAATTTTTTTACATGATTTGAGCATTGATGTCATGATAGAGTGAACTTATAAAAGAACTTAAGTAACGAGCATTGTTTTCATCCAATCTAATAATGGTTGCTGTTATTGGGTAGTGGAAGAGAAATTATTTTCAGATCAGTTTCAGTTCATTGCCTTTGTAGAAATTTTCTTACTGCGTTTGTAAATCACTATCAAAATGTGTTTAAGCAGTTTTCTGATTTCTTGTTGCTCTTATGGATGATCCGAATGAAGCCATTATTGTCATTCCTCACACAAAATCAGGGGCTTGATCTTGATTTGTGTAAGAAAAAGTATGTTTGTAGAAGAAATTCTTGCTGAAGTAAAGTGTATGAATACAAATTTGTGGGTTTGGTGTGTTGTGTTATATCAGGTTGAAGACGTGATGGAAGTAGGAGCTAATATCAGAAATGGTTTGGGGATTCGTCCAAGAACACGAGATGAATGAGTTTTTGTTTATACTGTTCATGAAATCTTGGATTTTGTGATTTAAAGTCTTGATCACGAGTCGAGTCGAGTCTTCGGCTCAGACTGCAATTCGGATGGTTAAAGATTCAAGAAGAGGCTCATTACTTTCTGTATCATCACTATAGTTGGGTATTTGTCTGAGTGTACTGAGTACTTGTGTATGTTCATAACCTTCCTTGAGTAATAATTTCTTCTTCATTTAGGAAACTTCCATCCTTCCTGGTGCTGATTTGTCAATCTTGTTTTTCCACTTTTTATTTTTCTTTCTTTTCCTGGTCATGCAAGTTAAATTTCTTGTAATGCATGAAAGATTTGAATGGGTTGCTTCATTATTTATATATTTAGTTACCTTTTCAA

mRNA sequence

ATGGTCCACACGGGTTCTAAATCGTTGACGGCGACGGCGACAGAATGGGGAAAAGAGAAAGGCGAAAGCAGGGAAAGAGAGATGGTGGAGAACGGAGGAAGCGACGGTGGTAGTAACGCCCATTGGTGGTGGGCCTTGGCCGGCGCAACGCAGCTTGGTTGGGGTATCGCCTCTTTTCGGCGAGGAGTTATCGGCGATTCTAGCCTCATGCCCTTTAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGCTGCCTCCTCGTCCGCCATCGCTTCCTTAAAGGCCGCCGGCATCCACAAGGTTGAAGACGTGATGGAAGTAGGAGCTAATATCAGAAATGGTTTGGGGATTCGTCCAAGAACACGAGATGAATGAGTTTTTGTTTATACTGTTCATGAAATCTTGGATTTTGTGATTTAAAGTCTTGATCACGAGTCGAGTCGAGTCTTCGGCTCAGACTGCAATTCGGATGGTTAAAGATTCAAGAAGAGGCTCATTACTTTCTGTATCATCACTATAGTTGGGTATTTGTCTGAGTGTACTGAGTACTTGTGTATGTTCATAACCTTCCTTGAGTAATAATTTCTTCTTCATTTAGGAAACTTCCATCCTTCCTGGTGCTGATTTGTCAATCTTGTTTTTCCACTTTTTATTTTTCTTTCTTTTCCTGGTCATGCAAGTTAAATTTCTTGTAATGCATGAAAGATTTGAATGGGTTGCTTCATTATTTATATATTTAGTTACCTTTTCAA

Coding sequence (CDS)

ATGGTCCACACGGGTTCTAAATCGTTGACGGCGACGGCGACAGAATGGGGAAAAGAGAAAGGCGAAAGCAGGGAAAGAGAGATGGTGGAGAACGGAGGAAGCGACGGTGGTAGTAACGCCCATTGGTGGTGGGCCTTGGCCGGCGCAACGCAGCTTGGTTGGGGTATCGCCTCTTTTCGGCGAGGAGTTATCGGCGATTCTAGCCTCATGCCCTTTAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGCTGCCTCCTCGTCCGCCATCGCTTCCTTAAAGGCCGCCGGCATCCACAAGGTTGAAGACGTGATGGAAGTAGGAGCTAATATCAGAAATGGTTTGGGGATTCGTCCAAGAACACGAGATGAATGA

Protein sequence

MVHTGSKSLTATATEWGKEKGESREREMVENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE
BLAST of CmaCh00G005200 vs. TrEMBL
Match: A0A0A0L700_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118070 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.1e-36
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 1

Query: 28  MVENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAASS 87
           M ENGGSD GSNAHWWWA AGA QLGWGIASFRRG IGDSS MP KAFAVASLFVGAA+S
Sbjct: 1   MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60

Query: 88  SAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 125
           S IASLKA+GIHKVEDVMEVGA IR+GLGIR R +D+
Sbjct: 61  STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 97

BLAST of CmaCh00G005200 vs. TrEMBL
Match: F6GV86_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02030 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.9e-27
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 1

Query: 29  VENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAASSS 88
           +E  G   G  +HWWWALA A QLGWG+ S+RRG +GDSSLMP KAF VASLFVGAA+S+
Sbjct: 1   MEENGHGSGDGSHWWWALASAAQLGWGVFSYRRGGVGDSSLMPVKAFGVASLFVGAAASA 60

Query: 89  AIASLKAAGIHKVEDVMEVGANIRNGLGIRPR 121
           A   L A+GIHKVED+ E+GANIR GLG+RPR
Sbjct: 61  AFGVLHASGIHKVEDLKEMGANIRTGLGVRPR 92

BLAST of CmaCh00G005200 vs. TrEMBL
Match: A0A0B0PN24_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_12557 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.7e-26
Identity = 61/100 (61.00%), Postives = 81/100 (81.00%), Query Frame = 1

Query: 27  EMVENGGSDGGS--NAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGA 86
           E  ENGG +G    N+HW+WA+A  +QLGW ++S+R+G  GD   MP KAFAVASLF+GA
Sbjct: 2   ETAENGGDNGKIHINSHWYWAIASVSQLGWAVSSYRKGYTGDHRFMPLKAFAVASLFLGA 61

Query: 87  ASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 125
           ++S+++A LKA+GIHKVED+M VGA+IR+GLGIRPRT D+
Sbjct: 62  SASASVAFLKASGIHKVEDLMGVGASIRSGLGIRPRTGDK 101

BLAST of CmaCh00G005200 vs. TrEMBL
Match: A0A0D2QYT2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G039500 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-25
Identity = 61/100 (61.00%), Postives = 80/100 (80.00%), Query Frame = 1

Query: 27  EMVENGGSDGGS--NAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGA 86
           E  ENGG +     N+HW+WA+A  +QLGW ++S+RRG  GD   MP KAFAVASLF+GA
Sbjct: 2   ETAENGGDNDKILINSHWYWAIASVSQLGWAVSSYRRGYTGDHRFMPLKAFAVASLFLGA 61

Query: 87  ASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 125
           ++S+++A LKA+GIHKVED+M VGA+IR+GLGIRPRT D+
Sbjct: 62  SASASVAFLKASGIHKVEDLMGVGASIRSGLGIRPRTGDK 101

BLAST of CmaCh00G005200 vs. TrEMBL
Match: M5VSJ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013770mg PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-25
Identity = 62/103 (60.19%), Postives = 80/103 (77.67%), Query Frame = 1

Query: 24  REREMVENGGSDG--GSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLF 83
           +E E +E+GGS G  GS AH WWA A A QLGW + S RRG  G+S+ MPFKAFAVASL+
Sbjct: 2   QEEETLESGGSGGRGGSRAHLWWAGASAAQLGWAVVSSRRGCAGNSTTMPFKAFAVASLY 61

Query: 84  VGAASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 125
           VG+ +++ +A L+A+GI KVED++E+GANIR GLG+  RTRDE
Sbjct: 62  VGSIATAGVAGLQASGIRKVEDLVELGANIRTGLGVHRRTRDE 104

BLAST of CmaCh00G005200 vs. TAIR10
Match: AT3G60480.1 (AT3G60480.1 unknown protein)

HSP 1 Score: 98.6 bits (244), Expect = 2.9e-21
Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = 1

Query: 30  ENGGSDGGSNA------HWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVG 89
           +N G+  G ++      HWWWAL    Q+ WGI   RRG  GD  LMP KAF VASLFVG
Sbjct: 4   QNAGTGAGESSLLDGSGHWWWALGSGAQIMWGIRLIRRGYAGDVRLMPLKAFGVASLFVG 63

Query: 90  AASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 125
           + ++S++A ++A GIH V+D +++GANIR  LG+ P+  D+
Sbjct: 64  SLATSSVALVRATGIHTVQDAIDLGANIRTNLGVTPQIPDK 104

BLAST of CmaCh00G005200 vs. NCBI nr
Match: gi|659074821|ref|XP_008437814.1| (PREDICTED: uncharacterized protein LOC103483131 [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 3.8e-39
Identity = 86/107 (80.37%), Postives = 93/107 (86.92%), Query Frame = 1

Query: 18  KEKGESREREMVENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAV 77
           KE     E+EM ENGGSDGGSNAHWWWA AGA QLGWGIASFRRG +GDSS MP KAFAV
Sbjct: 19  KESNAKAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAV 78

Query: 78  ASLFVGAASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 125
           ASLFVGAA+SSAIASLKA+GIHKVEDVMEVGA IR+GLGIR R +D+
Sbjct: 79  ASLFVGAAASSAIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 125

BLAST of CmaCh00G005200 vs. NCBI nr
Match: gi|449431982|ref|XP_004133779.1| (PREDICTED: uncharacterized protein LOC101221895 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 3.0e-36
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 1

Query: 28  MVENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAASS 87
           M ENGGSD GSNAHWWWA AGA QLGWGIASFRRG IGDSS MP KAFAVASLFVGAA+S
Sbjct: 1   MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60

Query: 88  SAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 125
           S IASLKA+GIHKVEDVMEVGA IR+GLGIR R +D+
Sbjct: 61  STIASLKASGIHKVEDVMEVGARIRSGLGIRSRAQDK 97

BLAST of CmaCh00G005200 vs. NCBI nr
Match: gi|1009140453|ref|XP_015887660.1| (PREDICTED: uncharacterized protein LOC107422691 [Ziziphus jujuba])

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-30
Identity = 70/104 (67.31%), Postives = 85/104 (81.73%), Query Frame = 1

Query: 25  EREMVENGGSDGG----SNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASL 84
           E E+V+  G++GG    S +HWWW +A A QLGWGI S RRG  G S+LMPFKAF VASL
Sbjct: 4   EEEVVDVDGNEGGGGVGSESHWWWGMASAAQLGWGIVSLRRGYTGHSNLMPFKAFTVASL 63

Query: 85  FVGAASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 125
           FVG+A+S+++ASL A+GIHKVED+MEVGANIR GLGIRPRTR+E
Sbjct: 64  FVGSAASASVASLHASGIHKVEDLMEVGANIRTGLGIRPRTREE 107

BLAST of CmaCh00G005200 vs. NCBI nr
Match: gi|225453438|ref|XP_002275512.1| (PREDICTED: uncharacterized protein LOC100266789 [Vitis vinifera])

HSP 1 Score: 129.0 bits (323), Expect = 5.6e-27
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 1

Query: 29  VENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAASSS 88
           +E  G   G  +HWWWALA A QLGWG+ S+RRG +GDSSLMP KAF VASLFVGAA+S+
Sbjct: 1   MEENGHGSGDGSHWWWALASAAQLGWGVFSYRRGGVGDSSLMPVKAFGVASLFVGAAASA 60

Query: 89  AIASLKAAGIHKVEDVMEVGANIRNGLGIRPR 121
           A   L A+GIHKVED+ E+GANIR GLG+RPR
Sbjct: 61  AFGVLHASGIHKVEDLKEMGANIRTGLGVRPR 92

BLAST of CmaCh00G005200 vs. NCBI nr
Match: gi|728848410|gb|KHG27853.1| (hypothetical protein F383_12557 [Gossypium arboreum])

HSP 1 Score: 125.2 bits (313), Expect = 8.1e-26
Identity = 61/100 (61.00%), Postives = 81/100 (81.00%), Query Frame = 1

Query: 27  EMVENGGSDGGS--NAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGA 86
           E  ENGG +G    N+HW+WA+A  +QLGW ++S+R+G  GD   MP KAFAVASLF+GA
Sbjct: 2   ETAENGGDNGKIHINSHWYWAIASVSQLGWAVSSYRKGYTGDHRFMPLKAFAVASLFLGA 61

Query: 87  ASSSAIASLKAAGIHKVEDVMEVGANIRNGLGIRPRTRDE 125
           ++S+++A LKA+GIHKVED+M VGA+IR+GLGIRPRT D+
Sbjct: 62  SASASVAFLKASGIHKVEDLMGVGASIRSGLGIRPRTGDK 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L700_CUCSA2.1e-3683.51Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118070 PE=4 SV=1[more]
F6GV86_VITVI3.9e-2767.39Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02030 PE=4 SV=... [more]
A0A0B0PN24_GOSAR5.7e-2661.00Uncharacterized protein OS=Gossypium arboreum GN=F383_12557 PE=4 SV=1[more]
A0A0D2QYT2_GOSRA1.6e-2561.00Uncharacterized protein OS=Gossypium raimondii GN=B456_004G039500 PE=4 SV=1[more]
M5VSJ5_PRUPE4.8e-2560.19Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013770mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G60480.12.9e-2147.52 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659074821|ref|XP_008437814.1|3.8e-3980.37PREDICTED: uncharacterized protein LOC103483131 [Cucumis melo][more]
gi|449431982|ref|XP_004133779.1|3.0e-3683.51PREDICTED: uncharacterized protein LOC101221895 [Cucumis sativus][more]
gi|1009140453|ref|XP_015887660.1|1.9e-3067.31PREDICTED: uncharacterized protein LOC107422691 [Ziziphus jujuba][more]
gi|225453438|ref|XP_002275512.1|5.6e-2767.39PREDICTED: uncharacterized protein LOC100266789 [Vitis vinifera][more]
gi|728848410|gb|KHG27853.1|8.1e-2661.00hypothetical protein F383_12557 [Gossypium arboreum][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G005200.1CmaCh00G005200.1mRNA


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh00G005200Cucurbita maxima (Rimu)cmacmaB015
CmaCh00G005200Cucurbita moschata (Rifu)cmacmoB012
CmaCh00G005200Cucumber (Gy14) v2cgybcmaB275
CmaCh00G005200Melon (DHL92) v3.6.1cmamedB002
CmaCh00G005200Silver-seed gourdcarcmaB0323
CmaCh00G005200Cucumber (Chinese Long) v3cmacucB0002
CmaCh00G005200Watermelon (97103) v2cmawmbB002