CmaCh00G002030 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh00G002030
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPlant self-incompatibility protein S1 family
LocationCma_Chr00 : 14017706 .. 14018155 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAAGAATATTATCGCTTTCTTTCTTTTCACGGTGGCTTTAGTGGGGGCTGAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAGGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAATTGGAGACGCCACATGCATATGTCTCTTTTGAAAGCTTTTGGCCTGAAACGCAGCACTTATGGCTCCGTGATAGGTGCAAACATGGAACTGTAGGAACTTGTATTTGGACGGCTAAAGATGATGGAATTTACTTGAGAAACTTTCTTGCTAATGTTGATGAATTGATACACAAGTGTATCTATAAAAGATAG

mRNA sequence

ATGATAAAGAATATTATCGCTTTCTTTCTTTTCACGGTGGCTTTAGTGGGGGCTGAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAGGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAATTGGAGACGCCACATGCATATGTCTCTTTTGAAAGCTTTTGGCCTGAAACGCAGCACTTATGGCTCCGTGATAGGTGCAAACATGGAACTGTAGGAACTTGTATTTGGACGGCTAAAGATGATGGAATTTACTTGAGAAACTTTCTTGCTAATGTTGATGAATTGATACACAAGTGTATCTATAAAAGATAG

Coding sequence (CDS)

ATGATAAAGAATATTATCGCTTTCTTTCTTTTCACGGTGGCTTTAGTGGGGGCTGAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAGGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAATTGGAGACGCCACATGCATATGTCTCTTTTGAAAGCTTTTGGCCTGAAACGCAGCACTTATGGCTCCGTGATAGGTGCAAACATGGAACTGTAGGAACTTGTATTTGGACGGCTAAAGATGATGGAATTTACTTGAGAAACTTTCTTGCTAATGTTGATGAATTGATACACAAGTGTATCTATAAAAGATAG

Protein sequence

MIKNIIAFFLFTVALVGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKCIYKR
Homology
[Close]
BLAST of CmaCh00G002030 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.9e-24
Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = 1 

Query: 15  LVGAEVPRVALPPPGPSRYYIHVVNGLSK-LGLLVHCQSKDDDLGYHRLLNHGDDYQWNF 74
           ++    P +  P    +++++HVVN L     L  HC+SKDDDLG  R L  G ++ W+F
Sbjct: 1   ILALSAPCLGSPGIRYNKWHVHVVNNLGAGKTLFAHCKSKDDDLG-ERNLAPGTEFNWSF 60

Query: 75  KVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRN 134
           K NF+GTTLYWC + T   + + + FW E  H WL+ RC       CIW AKDDGIY++ 
Sbjct: 61  KENFFGTTLYWCYMSTDQKHAALDVFWVEGDHSWLQYRCNWKD---CIWIAKDDGIYIKI 120

Query: 135 FLANVDELIHK 145
              N DE  HK
Sbjct: 121 IPENRDEFSHK 127

[Close]
BLAST of CmaCh00G002030 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23
Identity = 64/132 (48.48%), Postives = 80/132 (60.61%), Query Frame = 1 

Query: 15  LVGAEVPRVALPPPGP-SRYYIHVVNGLSK-LGLLVHCQSKDDDLGYHRLLNHGDDYQWN 74
           LV   V  +AL    P S + IH+ NGLS    L VHC+SKD DLG  R L+ G +++WN
Sbjct: 11  LVFLAVSTLALVCSKPLSPWEIHIKNGLSDGQALFVHCKSKDSDLG-ERTLSTGAEFKWN 70

Query: 75  FKVNFWGTTLYWCKLETPHA-YVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYL 134
           FKVN W TTL+WC L  P    V FE+FW E +  WLR +C  G +  C W A+D GIYL
Sbjct: 71  FKVNIWDTTLFWCYLRKPKGDQVRFEAFWVEKKTRWLRVKC-DGNI--CNWIAEDTGIYL 130

Query: 135 RNFLANVDELIH 144
           ++   N DE IH
Sbjct: 131 KDNSTNEDERIH 138

[Close]
BLAST of CmaCh00G002030 vs. TrEMBL
Match: B9S578_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722290 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.0e-23
Identity = 55/115 (47.83%), Postives = 79/115 (68.70%), Query Frame = 1 

Query: 32  RYYIHVVNGLSKLGLL-VHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETP 91
           ++++HVVNGLS+  +L +HC+S D+DLG H L   G ++ W+F++NF  TTLYWC +   
Sbjct: 32  KFHVHVVNGLSRNKILQIHCKSADNDLGAHSLAK-GREFSWSFRINFILTTLYWCHMAPD 91

Query: 92  -HAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHK 145
            H++V  + FW ++Q+L+  +RC  G    CIWTAKDDG+YLRN   N DE  HK
Sbjct: 92  DHSHVDLKVFW-DSQYLF--ERC--GGAQQCIWTAKDDGVYLRNIPKNTDEFQHK 140

[Close]
BLAST of CmaCh00G002030 vs. TrEMBL
Match: B9S577_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722080 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.6e-22
Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = 1 

Query: 32  RYYIHVVNGLSKLGLL-VHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKL-ET 91
           ++++HVVNGLS   +L VHC+S D+DLG   L N G ++ W+F++NF+ TTLYWC +   
Sbjct: 27  KFHVHVVNGLSPDKILFVHCKSADNDLGARNLSN-GQEFSWSFRMNFFMTTLYWCHMAPD 86

Query: 92  PHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIH 144
            H+YV  + FW      +L +RC H     CIW AKD+G+YLRN   N+DE  H
Sbjct: 87  DHSYVDMKVFWDSQ---YLSERCGHDQ--QCIWIAKDNGVYLRNIPMNIDEFQH 134

[Close]
BLAST of CmaCh00G002030 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-20
Identity = 59/137 (43.07%), Postives = 80/137 (58.39%), Query Frame = 1 

Query: 10  LFTVALVGAEVPRVALPPPGPSRYYIHVVNGLSK-LGLLVHCQSKDDDLGYHRLLNHGDD 69
           L  V +V A   R ++ P     +++HVVN LS    L +HC+SKDDDLG H+L   G +
Sbjct: 8   LVAVIVVLALAIRPSVSPIPTKTWHVHVVNNLSNNQTLFLHCKSKDDDLGEHKLTT-GTE 67

Query: 70  YQWNFKVNFWGTTLYWCKLETPHAYV-SFESFWPETQHLWLRDRCKHGTVGTCIWTAKDD 129
             W FK NF+ TTL+WC L  P  +  +F+ FW E    + + RC++     CIWTAKD+
Sbjct: 68  SNWKFKENFFQTTLFWCHLRKPDNFCNNFKVFWNED---FFQFRCRY---KDCIWTAKDE 127

Query: 130 GIYLRNFLANVDELIHK 145
           GIYL+N     DEL  K
Sbjct: 128 GIYLKNIPEGRDELWQK 137

[Close]
BLAST of CmaCh00G002030 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 78.2 bits (191), Expect = 4.8e-15
Identity = 51/151 (33.77%), Postives = 74/151 (49.01%), Query Frame = 1 

Query: 2   IKNIIAFFLFTVAL-------VGAEVPRVALPPPGPSRYYIHVVNGLSK-LGLLVHCQSK 61
           IK  +    F++AL       VG    R  + P   S + + VVNGL+    L +HC+SK
Sbjct: 4   IKQFLLAICFSLALTCQDHVLVGGTTTRDIIVPK-ISEWQVTVVNGLTTGETLFIHCKSK 63

Query: 62  DDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCK 121
           +DDLG   L    + + WNF  N   +T +WC +   + +++   FW +   + L  RC 
Sbjct: 64  EDDLGEINL-KFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDD---VILFHRCG 123

Query: 122 HGTVGTCIWTAKDDGIYLRNFLANVDELIHK 145
                 CIWTAK DG+YL N  +  D L  K
Sbjct: 124 WKN---CIWTAKTDGLYLWNSASGEDVLSRK 146

[Close]
BLAST of CmaCh00G002030 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 1 

Query: 28  PGPSRYYIHVVNGLSK-LGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCK 87
           P  S + + V NGL+    L +HC+SK++DLG   L    D + WNF  N   +TL+WC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCY 95

Query: 88  LETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHK 145
           +     +++ + FW +   + L  RC       C+WTAK+DG+YL N     D L  K
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRCDWKN---CVWTAKNDGLYLWNSAIGEDVLSEK 146

[Close]
BLAST of CmaCh00G002030 vs. TAIR10
Match: AT3G26880.1 (AT3G26880.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 62.0 bits (149), Expect = 3.6e-10
Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 1 

Query: 38  VNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFE 97
           +N  +K  L VHC+SK++D+G  + L  G+   ++FK NFWGTT +WC L     Y  + 
Sbjct: 32  LNPKNKNILKVHCKSKNNDIGV-KYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYR 91

Query: 98  SFWP-ETQHLWLRDRCKHGTVGTCIWTAKDDGIY 131
                +   L+ +D   +       W A+DDGIY
Sbjct: 92  GITAYQAIGLFAKDGSSYN------WLARDDGIY 118

[Close]
BLAST of CmaCh00G002030 vs. TAIR10
Match: AT5G04350.1 (AT5G04350.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 61.6 bits (148), Expect = 4.7e-10
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 1 

Query: 42  SKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLET-PH-----AYVS 101
           SKL L VHC+SKDDDLG H +L  G DY++ F  N W TT + C+++  P+      +V+
Sbjct: 38  SKL-LKVHCRSKDDDLGEH-ILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVA 97

Query: 102 FESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIY 131
           +E+ W +                +C W  ++DGIY
Sbjct: 98  YETSWSKALE------------ASCKWIGREDGIY 118

[Close]
BLAST of CmaCh00G002030 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 58.9 bits (141), Expect = 3.0e-09
Identity = 32/99 (32.32%), Postives = 56/99 (56.57%), Query Frame = 1 

Query: 31  SRYYIHVVNGL-SKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLET 90
           S+  + + N L ++L LL HC+SKDDDLG +R L  G+ + ++F   F+G TLY+C    
Sbjct: 46  SKRTVEINNDLGNQLTLLYHCKSKDDDLG-NRTLQPGESWSFSFGRQFFGRTLYFCSFSW 105

Query: 91  PHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDG 129
           P+   SF+  + + +     ++C+      C+W  + +G
Sbjct: 106 PNESHSFD-IYKDHRDSGGDNKCES---DRCVWKIRRNG 139

[Close]
BLAST of CmaCh00G002030 vs. NCBI nr
Match: gi|449443925|ref|XP_004139726.1| (PREDICTED: uncharacterized protein LOC101206205 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 4.2e-53
Identity = 96/145 (66.21%), Postives = 114/145 (78.62%), Query Frame = 1 

Query: 1   MIKNIIAFFLFTVALVGAE-VPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGY 60
           MI+N++ F+  T+ALVGA+ +PR    P  P+RYY+HVVNGLS   L VHCQSKD+DLGY
Sbjct: 1   MIRNVVVFWFATLALVGADRIPRTPFVPVNPARYYVHVVNGLSNYDLGVHCQSKDNDLGY 60

Query: 61  HRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGT 120
             L+N GDD+QWNFKVN +GTTL+WCKLE   AYVSFESFWPE+++ WLRDRC  G  G 
Sbjct: 61  QHLINRGDDFQWNFKVNIFGTTLFWCKLEKQDAYVSFESFWPESRNFWLRDRC--GPQGN 120

Query: 121 CIWTAKDDGIYLRNFLANVDELIHK 145
           CIWTAKDDGIYLRN   NVDE +HK
Sbjct: 121 CIWTAKDDGIYLRNNPTNVDEYVHK 143

[Close]
BLAST of CmaCh00G002030 vs. NCBI nr
Match: gi|659116532|ref|XP_008458117.1| (PREDICTED: uncharacterized protein LOC103497646 [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 94/134 (70.15%), Postives = 105/134 (78.36%), Query Frame = 1 

Query: 13  VALVGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWN 72
           V  V A V R+ LPPP  +RYYIHV+NGLS   L+VHCQSKDDDLGYH L N GDDYQWN
Sbjct: 2   VVFVKARVLRMTLPPPSVTRYYIHVMNGLSNADLIVHCQSKDDDLGYHHLANRGDDYQWN 61

Query: 73  FKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLR 132
           FK NFW TTL+WCKLE  + +VSFESFWPE++  WLRDRC  G  GTCIWTAKDDGIYLR
Sbjct: 62  FKENFWQTTLFWCKLEKQNVHVSFESFWPESKSTWLRDRC--GYQGTCIWTAKDDGIYLR 121

Query: 133 NFLANVDELIHKCI 147
           N  AN+DE +HK I
Sbjct: 122 NMPANIDEFVHKWI 133

[Close]
BLAST of CmaCh00G002030 vs. NCBI nr
Match: gi|659124355|ref|XP_008462115.1| (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo])

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52
Identity = 93/136 (68.38%), Postives = 108/136 (79.41%), Query Frame = 1 

Query: 13  VALVGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWN 72
           + LV  EV +   PPP PSRY++HVVNGLS   L VHCQSK+DDLGYH L+N GD+YQWN
Sbjct: 1   MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWN 60

Query: 73  FKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLR 132
           F+ N WGTTL+WC+LE P AYV+FESFWPET+++WLRDRC  G  GTCIWTAKDDGIYLR
Sbjct: 61  FEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRC--GNQGTCIWTAKDDGIYLR 120

Query: 133 NFLANVDELIHKCIYK 149
           N   NVDE +HK I K
Sbjct: 121 NMPTNVDEFVHKWIPK 134

[Close]
BLAST of CmaCh00G002030 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 2.7e-52
Identity = 91/136 (66.91%), Postives = 110/136 (80.88%), Query Frame = 1 

Query: 13  VALVGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWN 72
           + LV ++VP  + PPP  SRY++HVVNGLS   L VHC+SKDDDLGYH ++NHGDD+QWN
Sbjct: 1   MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWN 60

Query: 73  FKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLR 132
           F+ NFWGTTL+WC+LE P AY  FESFWPE+++LWLR RC +  +GTCIWTAKDDGIYLR
Sbjct: 61  FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGN-QLGTCIWTAKDDGIYLR 120

Query: 133 NFLANVDELIHKCIYK 149
           N  ANVDE +HK I K
Sbjct: 121 NMPANVDEFVHKWIPK 135

[Close]
BLAST of CmaCh00G002030 vs. NCBI nr
Match: gi|659124347|ref|XP_008462110.1| (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 3.0e-51
Identity = 92/147 (62.59%), Postives = 113/147 (76.87%), Query Frame = 1 

Query: 2   IKNIIAFFLFTVALVGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHR 61
           ++N++  +L T  +V  +V R   PPP PSRY+++VVNGLS   L VHCQSKDDDLGYH 
Sbjct: 1   MRNVVILWLATTVVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHH 60

Query: 62  LLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCI 121
           L+NHGD +QWNF+ NF+GTTL+WC+LE   AYV+FESFWPE+ + WLRDRC  G  GTC+
Sbjct: 61  LVNHGDYFQWNFEENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRC--GNQGTCV 120

Query: 122 WTAKDDGIYLRNFLANVDELIHKCIYK 149
           W AKDDGIYLRN   NVDEL+HK I K
Sbjct: 121 WIAKDDGIYLRNIPVNVDELVHKWISK 145

The following BLAST results are available for this feature:
BLAST of CmaCh00G002030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh00G002030 vs. TrEMBL
Match NameE-valueIdentityDescription
M5VWE5_PRUPE4.9e-2442.75Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S... [more]
A0A0A0K6N8_CUCSA4.1e-2348.48Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1[more]
B9S578_RICCO7.0e-2347.83Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722290 PE=4 SV=1[more]
B9S577_RICCO4.6e-2246.49Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722080 PE=4 SV=1[more]
V4VUI1_9ROSI1.5e-2043.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1[more]
BLAST of CmaCh00G002030 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16295.14.8e-1533.77 S-protein homologue 1[more]
AT4G29035.11.4e-1435.59 Plant self-incompatibility protein S1 family[more]
AT3G26880.13.6e-1035.11 Plant self-incompatibility protein S1 family[more]
AT5G04350.14.7e-1036.84 Plant self-incompatibility protein S1 family[more]
AT4G16195.13.0e-0932.32 Plant self-incompatibility protein S1 family[more]
BLAST of CmaCh00G002030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443925|ref|XP_004139726.1|4.2e-5366.21PREDICTED: uncharacterized protein LOC101206205 [Cucumis sativus][more]
gi|659116532|ref|XP_008458117.1|1.2e-5270.15PREDICTED: uncharacterized protein LOC103497646 [Cucumis melo][more]
gi|659124355|ref|XP_008462115.1|1.6e-5268.38PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo][more]
gi|449443935|ref|XP_004139731.1|2.7e-5266.91PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus][more]
gi|659124347|ref|XP_008462110.1|3.0e-5162.59PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G002030.1CmaCh00G002030.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 35..133
score: 1.4
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 1..143
score: 8.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh00G002030CmoCh00G001220Cucurbita moschata (Rifu)cmacmoB001
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh00G002030CmaCh00G003070Cucurbita maxima (Rimu)cmacmaB000
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh00G002030Cucurbita maxima (Rimu)cmacmaB003
CmaCh00G002030Cucurbita maxima (Rimu)cmacmaB018