Cucsa.365970.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTTCAAATCCAAAAGAGGTAGGAAAGGAGATGTTTATGAGCATGGTACCAATTGGGAGGATGTGCCAAGCTCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGGCTACCGTTGGGTTGCGGAGCCGGGGATCGATAGAAAGGCCAAAGATTACATCGATAGGATTTATAAAAATCGTGTCTTCGAAACCGAGCGTCAAACTGTCACTATTCATCCCAATGGACCTAATTCCAATGTGTAG CTTTTTCAAATCCAAAAGAGGTAGGAAAGGAGATGTTTATGAGCATGGTACCAATTGGGAGGATGTGCCAAGCTCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGGCTACCGTTGGGTTGCGGAGCCGGGGATCGATAGAAAGGCCAAAGATTACATCGATAGGATTTATAAAAATCGTGTCTTCGAAACCGAGCGTCAAACTGTCACTATTCATCCCAATGGACCTAATTCCAATGTGTAG CTTTTTCAAATCCAAAAGAGGTAGGAAAGGAGATGTTTATGAGCATGGTACCAATTGGGAGGATGTGCCAAGCTCGAGCAAGGTGTGGCCAAGCGATGAGGACAAAGGCTACCGTTGGGTTGCGGAGCCGGGGATCGATAGAAAGGCCAAAGATTACATCGATAGGATTTATAAAAATCGTGTCTTCGAAACCGAGCGTCAAACTGTCACTATTCATCCCAATGGACCTAATTCCAATGTGTAG FFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDRKAKDYIDRIYKNRVFETERQTVTIHPNGPNSNV*
BLAST of Cucsa.365970.1 vs. TrEMBL
Match: A0A0A0K8W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016905 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 2.4e-41 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. TrEMBL
Match: A0A0A0K7Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014900 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.2e-29 Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. TrEMBL
Match: A0A0A0KBW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014870 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 2.7e-29 Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. TrEMBL
Match: A0A0A0KAK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014890 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.2e-26 Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. TrEMBL
Match: A0A0A0K8V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014880 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.7e-23 Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. TAIR10
Match: AT5G26620.1 (AT5G26620.1 unknown protein) HSP 1 Score: 65.1 bits (157), Expect = 2.3e-11 Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. TAIR10
Match: AT3G05858.1 (AT3G05858.1 unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-10 Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. NCBI nr
Match: gi|700190669|gb|KGN45873.1| (hypothetical protein Csa_6G016905 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 3.4e-41 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. NCBI nr
Match: gi|700190666|gb|KGN45870.1| (hypothetical protein Csa_6G014900 [Cucumis sativus]) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-29 Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. NCBI nr
Match: gi|700190663|gb|KGN45867.1| (hypothetical protein Csa_6G014870 [Cucumis sativus]) HSP 1 Score: 135.6 bits (340), Expect = 3.9e-29 Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. NCBI nr
Match: gi|700190665|gb|KGN45869.1| (hypothetical protein Csa_6G014890 [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 3.1e-26 Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 1
BLAST of Cucsa.365970.1 vs. NCBI nr
Match: gi|700190664|gb|KGN45868.1| (hypothetical protein Csa_6G014880 [Cucumis sativus]) HSP 1 Score: 116.3 bits (290), Expect = 2.5e-23 Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
|