Cucsa.349000.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.349000.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	ROP-interactive CRIB motif-containing protein 6, putative
Location	scaffold03487 : 374650 .. 375565 (-)
Sequence length	599

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAATGAGAAAGAAGCTGAGATGAAAATTGGGCATCCAACAGATGTTAAACATGTTGCTCATATTGGTTGGGATGGTCCTTCTGTCAATTCTCCAAGCTGGGTAAGATTTCGAAAATCAATATTGATTTAGTTTTTAACCATATGCATATATAATCAAAATTTGTTCTCAATCTTATATTGTATTGTTTGTCATATAAAACGGGTCACTAATTTTGTAGATGAATGAATTTAAAGCGCCACCATCGTTTTCATCTGCTCCGTTGAGTCTGCATGCCTCTGGAGACAACAAAGAGGATGTTTCTGTTAAATGGGTATCAGAAGGTTTGCTTACTTACTTGTCTGACTCCTCATCAACTTTATTTAAATTTTGTTTAATAAGTCTTTTGACACAATTTTATTTTTTAAAACCAAAAACACATATTGTTCGTCGCACGTTGGTTTAATTTTTTTCAAAATTGAAAATTTGCATTGCACGTAAAAAAATTCTTGAAATTGACACCTTATGAGTTTGTGTGTGTAGATCGTCCTAGCAGAAGAGTAGCGAAGGGTTCAAGTTCATCAGCAAAAAATTTAACGGCGGACGTAACAAAAACATCAAAACACCCTTCTTCTTCCTCCACCACCTCCTCCTCAACGGAGTCTCCCACATGCAGAGAAAGGTCATCGGAAAGACAAAAAACAAGACGATCTTCAAAGTCCAAGGAACCATCGTCGTCGGACAACAACAACAACAACCACTCCCCCACCTTAAGCCTACCGGACGTCCCAAGACAAACCCGTCGCAAGAAAACAACCCGAACCAAACCCCACCTGGCTCCAGAAACTTACAAGTCCCCTCATTCCGACCCTGGCTCCACCACCGCTACCGGCTCCATTTCTTTATCCAAAGACAGCGATCTATGTCAGACCCCTTAA

mRNA sequence

ACAATGAGAAAGAAGCTGAGATGAAAATTGGGCATCCAACAGATGTTAAACATGTTGCTCATATTGGTTGGGATGGTCCTTCTGTCAATTCTCCAAGCTGGATGAATGAATTTAAAGCGCCACCATCGTTTTCATCTGCTCCGTTGAGTCTGCATGCCTCTGGAGACAACAAAGAGGATGTTTCTGTTAAATGGGTATCAGAAGATCGTCCTAGCAGAAGAGTAGCGAAGGGTTCAAGTTCATCAGCAAAAAATTTAACGGCGGACGTAACAAAAACATCAAAACACCCTTCTTCTTCCTCCACCACCTCCTCCTCAACGGAGTCTCCCACATGCAGAGAAAGGTCATCGGAAAGACAAAAAACAAGACGATCTTCAAAGTCCAAGGAACCATCGTCGTCGGACAACAACAACAACAACCACTCCCCCACCTTAAGCCTACCGGACGTCCCAAGACAAACCCGTCGCAAGAAAACAACCCGAACCAAACCCCACCTGGCTCCAGAAACTTACAAGTCCCCTCATTCCGACCCTGGCTCCACCACCGCTACCGGCTCCATTTCTTTATCCAAAGACAGCGATCTATGTCAGACCCCTTAA

Coding sequence (CDS)

ACAATGAGAAAGAAGCTGAGATGAAAATTGGGCATCCAACAGATGTTAAACATGTTGCTCATATTGGTTGGGATGGTCCTTCTGTCAATTCTCCAAGCTGGATGAATGAATTTAAAGCGCCACCATCGTTTTCATCTGCTCCGTTGAGTCTGCATGCCTCTGGAGACAACAAAGAGGATGTTTCTGTTAAATGGGTATCAGAAGATCGTCCTAGCAGAAGAGTAGCGAAGGGTTCAAGTTCATCAGCAAAAAATTTAACGGCGGACGTAACAAAAACATCAAAACACCCTTCTTCTTCCTCCACCACCTCCTCCTCAACGGAGTCTCCCACATGCAGAGAAAGGTCATCGGAAAGACAAAAAACAAGACGATCTTCAAAGTCCAAGGAACCATCGTCGTCGGACAACAACAACAACAACCACTCCCCCACCTTAAGCCTACCGGACGTCCCAAGACAAACCCGTCGCAAGAAAACAACCCGAACCAAACCCCACCTGGCTCCAGAAACTTACAAGTCCCCTCATTCCGACCCTGGCTCCACCACCGCTACCGGCTCCATTTCTTTATCCAAAGACAGCGATCTATGTCAGACCCCTTAA

Protein sequence

NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSISLSKDSDLCQTP*

Homology

[Close]

BLAST of Cucsa.349000.1 vs. Swiss-Prot
Match: RIC7_ARATH (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.2e-20
Identity = 59/159 (37.11%), Postives = 88/159 (55.35%), Query Frame = 1


Query: 2   EKEAEMKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKED 61
           EKE EM+IG+PTDVKHVAHIGWDGPS N  +PSWMN+FK+ P   S        G  ++D
Sbjct: 29  EKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMES------IQGLGEDD 88

Query: 62  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 121
            SVK  SE     R       S +  +++    +K  S  +   +S +  +    SS R 
Sbjct: 89  SSVKCQSEFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTS----SSRRT 148

Query: 122 KTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKT 159
           K   S+ S   ++ D +++    +  LP+VP++++RKK+
Sbjct: 149 KDEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKS 177

[Close]

BLAST of Cucsa.349000.1 vs. Swiss-Prot
Match: RIC6_ARATH (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-19
Identity = 64/165 (38.79%), Postives = 90/165 (54.55%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           +EKE E++IG+PTDVKHVAHIGWDGPS N  +PSWM EF +   F S      A G  ++
Sbjct: 26  SEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFES------AEGVGED 85

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D S+K +SE         G S    NL          P S+   +S   SPT +++SS++
Sbjct: 86  DSSIKCMSE-------YGGRSRDLPNL----------PKSTRKAASEKGSPT-KDKSSDK 145

Query: 121 QKTRRSSKSKEPSS------SDNNNNNHSPTLSLPDVPRQTRRKK 158
            K R S+K    SS      ++  +   S    LP++P+++RRKK
Sbjct: 146 TKRRSSNKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKK 166

[Close]

BLAST of Cucsa.349000.1 vs. Swiss-Prot
Match: RIC8_ARATH (CRIB domain-containing protein RIC8 OS=Arabidopsis thaliana GN=RIC8 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-14
Identity = 67/194 (34.54%), Postives = 85/194 (43.81%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSV--NSPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           NEKEAEM+IG PTDVKHVAHIGWDG SV  N PSWM +FK    +S A +     G+ KE
Sbjct: 9   NEKEAEMQIGTPTDVKHVAHIGWDGGSVNHNPPSWMKDFKVLGGYSPALI-----GNIKE 68

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D S  +    R SR + +   SS +               SST   S      R R S +
Sbjct: 69  DASCIFEDSTR-SRDIPRLPKSSRER--------------SSTLGGSPTKERSRRRGSSQ 128

Query: 121 -----QKTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSP 180
                + +RRSSK       D   N  S      D      R+ + R +           
Sbjct: 129 YNGNPKVSRRSSKESSAIPQDGGFNKKSRRKKSKDCVDGGSRRSSRRVRGSQVESI---- 177

Query: 181 HSDPGSTTATGSIS 188
            SD  ST+  G ++
Sbjct: 189 -SDSSSTSDAGYLT 177

[Close]

BLAST of Cucsa.349000.1 vs. Swiss-Prot
Match: RIC5_ARATH (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-13
Identity = 55/167 (32.93%), Postives = 76/167 (45.51%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDV 60
           +EKE EM+IG PTDVKHVAHIGW+GPS  +PSWM++FK                 ++   
Sbjct: 21  DEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKP---------------TDQTKT 80

Query: 61  SVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPT---CRERSSE 120
             K  S  +P      GSS              KH      TS+   SPT    R   S 
Sbjct: 81  ETKGTSNKKP------GSSG------------EKHRKGRRKTSTGNNSPTESPSRVGGSV 140

Query: 121 RQKTRRSSKSKEPSSSDNNNNNHSPTLSLPD------VPRQTRRKKT 159
           R   R + K +E ++   + +     L LP       VP+Q+++KK+
Sbjct: 141 RPSKRNTGKQREQNTGSGSESGSG--LELPQQTDQFVVPKQSKQKKS 152

[Close]

BLAST of Cucsa.349000.1 vs. Swiss-Prot
Match: RIC3_ARATH (CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana GN=RIC3 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 59/204 (28.92%), Postives = 89/204 (43.63%), Query Frame = 1


Query: 2   EKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVS 61
           EK+ +M+IG PTDVKHVAHIG DGP+ N PSWM +FK P    +  +   A  +N +   
Sbjct: 21  EKDKDMQIGFPTDVKHVAHIGSDGPATNVPSWMGDFK-PQENENGQVVSRADANNNQIGE 80

Query: 62  VKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKT 121
              + E  P     K   +  K+ T  V++    P  +S+ S+S   P         + T
Sbjct: 81  GVGLQELLPPTDKPKHKKTRRKSET--VSQNGSPPRRNSSASASDMQP---------KNT 140

Query: 122 RRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGST- 181
           RR  +S+  S   +N+         P V R+     TT       P +  S HS   ++ 
Sbjct: 141 RRHHRSRHGSIDSSND---------PSVRRRRVVSVTTNDMEGSYPLSDSSTHSRKSTSR 200

Query: 182 ------TATGSISLSKDSDLCQTP 199
                 +  G +S+ K     + P
Sbjct: 201 HRKPKGSGGGELSMKKTKGKTENP 203

[Close]

BLAST of Cucsa.349000.1 vs. TrEMBL
Match: A0A0A0KF43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.1e-106
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1


Query: 7   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 66
           MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60

Query: 67  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 126
           EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK
Sbjct: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 120

Query: 127 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 186
           SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI
Sbjct: 121 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 180

Query: 187 SLSKDSDLCQTP 199
           SLSKDSDLCQTP
Sbjct: 181 SLSKDSDLCQTP 192

[Close]

BLAST of Cucsa.349000.1 vs. TrEMBL
Match: B9SV18_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.2e-35
Identity = 95/206 (46.12%), Postives = 128/206 (62.14%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPP-SFSSAPLSLHASGDNKED 60
           NEKE EM+IG+PTDVKHVAHIGWDGPSV SPSWMNEFKAP   FSSAP  L+++G+ KED
Sbjct: 43  NEKEPEMQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAP--LNSNGEPKED 102

Query: 61  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 120
            S+ WVSED  SRR ++  S        ++ K S+ P  SST     ESPT RE++ + +
Sbjct: 103 NSITWVSEDSSSRRGSR--SRGIDRDLPELPKASRKP--SSTERLDGESPT-REKTDKPK 162

Query: 121 KTRRSSKSKEPSSSDNNNNNHSPTLS--------LPDVPRQTRRKKTTRTKPHLAPETYK 180
           ++R+SS++     +D  +  HS   S        LPD+P++TRRKK+       A    K
Sbjct: 163 QSRKSSRNATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRA-K 222

Query: 181 SPHSDPGSTTATGSISLSKDSDLCQT 198
           +   D    + +GSIS S + +LC+T
Sbjct: 223 AQALDADCGSDSGSISNSLNGELCET 240

[Close]

BLAST of Cucsa.349000.1 vs. TrEMBL
Match: U5GNR4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03680g PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-33
Identity = 92/209 (44.02%), Postives = 124/209 (59.33%), Query Frame = 1


Query: 3   KEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSV 62
           KE EM+IG+PTDVKHVAHIGWDGPS+NSPSWM EFK+PP FSSAPLSL    D+KE+ SV
Sbjct: 25  KEPEMQIGYPTDVKHVAHIGWDGPSINSPSWMTEFKSPPEFSSAPLSL--DQDSKEEGSV 84

Query: 63  KWVSE--DRPSRRV------AKGSSSSAKNLTA-DVTKTSKHPSSSSTTSSSTESPTCRE 122
           KWVSE   R   R       A GS   ++N  A D+ +  K     S+T +S ESP+ +E
Sbjct: 85  KWVSEGSSRKGSRAPNSPPGAPGSPVGSQNSPARDLPELPKSSRRRSSTGTSAESPS-KE 144

Query: 123 RSSERQKTRRSSK--SKEPSSSDNNNNNH-------SPTLSLPDVPRQTRRKKTTRTKPH 182
           +S + +++RRSS+  +K+       + NH        P   LP++P++TRRKK+      
Sbjct: 145 KSDKPKQSRRSSRNGTKDLLDGSKTSRNHKDPSVENKPPSDLPEIPKKTRRKKSKDASVG 204

Query: 183 LAPETYKSPHSDPGSTTATGSISLSKDSD 194
            +    +S    P S    GS  +SK S+
Sbjct: 205 ESSSRSRSRSKVPASEGDEGSEMISKSSN 230

[Close]

BLAST of Cucsa.349000.1 vs. TrEMBL
Match: M5W154_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023388mg PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.0e-32
Identity = 85/200 (42.50%), Postives = 121/200 (60.50%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPS--VNSPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           + K  EM+IG PTDVKHVAHIGW+GPS    SPSWMNEF+APP +SS PLS   +G+ KE
Sbjct: 17  DNKGQEMQIGFPTDVKHVAHIGWEGPSTAAGSPSWMNEFQAPPGYSSGPLS---NGETKE 76

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D  VKWVS+D   +  ++G+ S A + T D+ + S   +SS       +SP  RERS + 
Sbjct: 77  DPGVKWVSQDSSRKGSSRGARSPAHD-TPDLPRASPQQTSSGHGDGGIDSPK-RERSDKP 136

Query: 121 QKTRRSSKSKEPSSS---------DNNNNNHSPTLSLPDVPRQTRRKK---------TTR 180
           ++TRRSSK+++ + S         ++ + + SP  + PD+P++TRRKK         + +
Sbjct: 137 KQTRRSSKNRDTTDSITRGIRQSMESIHGSESPQ-NPPDIPKKTRRKKSKDSSVGGASRK 196

[Close]

BLAST of Cucsa.349000.1 vs. TrEMBL
Match: A0A0A0L7D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-31
Identity = 96/210 (45.71%), Postives = 119/210 (56.67%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDV 60
           NEKE EM+IG PTDVKHVAHIGWDGPSVNSPSWMNEFK P            +GD K+D 
Sbjct: 22  NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKHP-----------NNGDIKQDA 81

Query: 61  SVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQK 120
           S + VS+D      +K   +       ++ K+SK   SS+   S  ESPT R++ SE+ K
Sbjct: 82  SAQCVSQD------SKRDMAVTSRDMPELPKSSKR-QSSTVGGSVAESPTMRDK-SEKVK 141

Query: 121 TRRSSKSKEPSSSDN----------NNNNHSPTLSLPDVPRQTRRKK------TTRTKPH 180
           +++SSK++E SSSDN          N  + SPT SLP VP++ RRKK      T      
Sbjct: 142 SKKSSKARESSSSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRSKA 201

Query: 181 LAPETYKSPHSDPGSTTATGSISLSKDSDL 195
            A ET  S  S+  S    GSIS S D DL
Sbjct: 202 TAAETCSSQFSNNASD--VGSISRSNDDDL 210

[Close]

BLAST of Cucsa.349000.1 vs. TAIR10
Match: AT4G28556.1 (AT4G28556.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.6e-21
Identity = 59/159 (37.11%), Postives = 88/159 (55.35%), Query Frame = 1


Query: 2   EKEAEMKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKED 61
           EKE EM+IG+PTDVKHVAHIGWDGPS N  +PSWMN+FK+ P   S        G  ++D
Sbjct: 29  EKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMNDFKSSPVMES------IQGLGEDD 88

Query: 62  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 121
            SVK  SE     R       S +  +++    +K  S  +   +S +  +    SS R 
Sbjct: 89  SSVKCQSEFGGRTRDLPKLPKSTRKSSSEKGSPTKERSDKTKRRTSNKGTS----SSRRT 148

Query: 122 KTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKT 159
           K   S+ S   ++ D +++    +  LP+VP++++RKK+
Sbjct: 149 KDEDSTSSSRRTTKDEDSSLSQHSAGLPEVPKKSKRKKS 177

[Close]

BLAST of Cucsa.349000.1 vs. TAIR10
Match: AT2G20430.1 (AT2G20430.1 ROP-interactive CRIB motif-containing protein 6)

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 64/165 (38.79%), Postives = 90/165 (54.55%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVN--SPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           +EKE E++IG+PTDVKHVAHIGWDGPS N  +PSWM EF +   F S      A G  ++
Sbjct: 26  SEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEFNSGGGFES------AEGVGED 85

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D S+K +SE         G S    NL          P S+   +S   SPT +++SS++
Sbjct: 86  DSSIKCMSE-------YGGRSRDLPNL----------PKSTRKAASEKGSPT-KDKSSDK 145

Query: 121 QKTRRSSKSKEPSS------SDNNNNNHSPTLSLPDVPRQTRRKK 158
            K R S+K    SS      ++  +   S    LP++P+++RRKK
Sbjct: 146 TKRRSSNKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKK 166

[Close]

BLAST of Cucsa.349000.1 vs. TAIR10
Match: AT1G03982.1 (AT1G03982.1 PAK-box/P21-Rho-binding family protein)

HSP 1 Score: 80.9 bits (198), Expect = 9.9e-16
Identity = 67/194 (34.54%), Postives = 85/194 (43.81%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSV--NSPSWMNEFKAPPSFSSAPLSLHASGDNKE 60
           NEKEAEM+IG PTDVKHVAHIGWDG SV  N PSWM +FK    +S A +     G+ KE
Sbjct: 9   NEKEAEMQIGTPTDVKHVAHIGWDGGSVNHNPPSWMKDFKVLGGYSPALI-----GNIKE 68

Query: 61  DVSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSER 120
           D S  +    R SR + +   SS +               SST   S      R R S +
Sbjct: 69  DASCIFEDSTR-SRDIPRLPKSSRER--------------SSTLGGSPTKERSRRRGSSQ 128

Query: 121 -----QKTRRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSP 180
                + +RRSSK       D   N  S      D      R+ + R +           
Sbjct: 129 YNGNPKVSRRSSKESSAIPQDGGFNKKSRRKKSKDCVDGGSRRSSRRVRGSQVESI---- 177

Query: 181 HSDPGSTTATGSIS 188
            SD  ST+  G ++
Sbjct: 189 -SDSSSTSDAGYLT 177

[Close]

BLAST of Cucsa.349000.1 vs. TAIR10
Match: AT3G23380.1 (AT3G23380.1 ROP-interactive CRIB motif-containing protein 5)

HSP 1 Score: 77.8 bits (190), Expect = 8.4e-15
Identity = 55/167 (32.93%), Postives = 76/167 (45.51%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDV 60
           +EKE EM+IG PTDVKHVAHIGW+GPS  +PSWM++FK                 ++   
Sbjct: 21  DEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKP---------------TDQTKT 80

Query: 61  SVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPT---CRERSSE 120
             K  S  +P      GSS              KH      TS+   SPT    R   S 
Sbjct: 81  ETKGTSNKKP------GSSG------------EKHRKGRRKTSTGNNSPTESPSRVGGSV 140

Query: 121 RQKTRRSSKSKEPSSSDNNNNNHSPTLSLPD------VPRQTRRKKT 159
           R   R + K +E ++   + +     L LP       VP+Q+++KK+
Sbjct: 141 RPSKRNTGKQREQNTGSGSESGSG--LELPQQTDQFVVPKQSKQKKS 152

[Close]

BLAST of Cucsa.349000.1 vs. TAIR10
Match: AT1G04450.1 (AT1G04450.1 ROP-interactive CRIB motif-containing protein 3)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 59/204 (28.92%), Postives = 89/204 (43.63%), Query Frame = 1


Query: 2   EKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVS 61
           EK+ +M+IG PTDVKHVAHIG DGP+ N PSWM +FK P    +  +   A  +N +   
Sbjct: 21  EKDKDMQIGFPTDVKHVAHIGSDGPATNVPSWMGDFK-PQENENGQVVSRADANNNQIGE 80

Query: 62  VKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKT 121
              + E  P     K   +  K+ T  V++    P  +S+ S+S   P         + T
Sbjct: 81  GVGLQELLPPTDKPKHKKTRRKSET--VSQNGSPPRRNSSASASDMQP---------KNT 140

Query: 122 RRSSKSKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGST- 181
           RR  +S+  S   +N+         P V R+     TT       P +  S HS   ++ 
Sbjct: 141 RRHHRSRHGSIDSSND---------PSVRRRRVVSVTTNDMEGSYPLSDSSTHSRKSTSR 200

Query: 182 ------TATGSISLSKDSDLCQTP 199
                 +  G +S+ K     + P
Sbjct: 201 HRKPKGSGGGELSMKKTKGKTENP 203

[Close]

BLAST of Cucsa.349000.1 vs. NCBI nr
Match: gi|700191182|gb|KGN46386.1| (hypothetical protein Csa_6G088140 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 4.4e-106
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1


Query: 7   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 66
           MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS
Sbjct: 1   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 60

Query: 67  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 126
           EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK
Sbjct: 61  EDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRRSSK 120

Query: 127 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 186
           SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI
Sbjct: 121 SKEPSSSDNNNNNHSPTLSLPDVPRQTRRKKTTRTKPHLAPETYKSPHSDPGSTTATGSI 180

Query: 187 SLSKDSDLCQTP 199
           SLSKDSDLCQTP
Sbjct: 181 SLSKDSDLCQTP 192

[Close]

BLAST of Cucsa.349000.1 vs. NCBI nr
Match: gi|659120438|ref|XP_008460194.1| (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-87
Identity = 176/197 (89.34%), Postives = 182/197 (92.39%), Query Frame = 1


Query: 7   MKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSVKWVS 66
           M+IG+PTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSL A GDNKEDVSVK VS
Sbjct: 1   MQIGYPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLPAPGDNKEDVSVKGVS 60

Query: 67  EDRPSRRVAKG-SSSSAKNLTAD--VTKTSKHPSSSSTTSSSTESPTCRERSSERQKTRR 126
           EDR SRRV KG SSSSAKNLTAD  VTKTSKHPSSSSTT SST+SPTCRERSSERQKTRR
Sbjct: 61  EDR-SRRVEKGRSSSSAKNLTADDVVTKTSKHPSSSSTTPSSTDSPTCRERSSERQKTRR 120

Query: 127 SSKSKEPSSSDNNNNNHSPTLSLPDVPRQT-RRKKTTRTKPHLAPETYKSPHSDPG-STT 186
           SSKSKE SSS +NNNNHSPTLSLPDVPRQ  RRKKTTRTKPHLAPETYKSP+SDPG STT
Sbjct: 121 SSKSKESSSSSDNNNNHSPTLSLPDVPRQNPRRKKTTRTKPHLAPETYKSPYSDPGASTT 180

Query: 187 ATGSISLSKDSDLCQTP 199
           AT SISLSKD+DLCQTP
Sbjct: 181 ATDSISLSKDTDLCQTP 196

[Close]

BLAST of Cucsa.349000.1 vs. NCBI nr
Match: gi|223530665|gb|EEF32538.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 95/206 (46.12%), Postives = 128/206 (62.14%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPP-SFSSAPLSLHASGDNKED 60
           NEKE EM+IG+PTDVKHVAHIGWDGPSV SPSWMNEFKAP   FSSAP  L+++G+ KED
Sbjct: 43  NEKEPEMQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAP--LNSNGEPKED 102

Query: 61  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 120
            S+ WVSED  SRR ++  S        ++ K S+ P  SST     ESPT RE++ + +
Sbjct: 103 NSITWVSEDSSSRRGSR--SRGIDRDLPELPKASRKP--SSTERLDGESPT-REKTDKPK 162

Query: 121 KTRRSSKSKEPSSSDNNNNNHSPTLS--------LPDVPRQTRRKKTTRTKPHLAPETYK 180
           ++R+SS++     +D  +  HS   S        LPD+P++TRRKK+       A    K
Sbjct: 163 QSRKSSRNATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRA-K 222

Query: 181 SPHSDPGSTTATGSISLSKDSDLCQT 198
           +   D    + +GSIS S + +LC+T
Sbjct: 223 AQALDADCGSDSGSISNSLNGELCET 240

[Close]

BLAST of Cucsa.349000.1 vs. NCBI nr
Match: gi|1000945521|ref|XP_015581245.1| (PREDICTED: CRIB domain-containing protein RIC7 [Ricinus communis])

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 95/206 (46.12%), Postives = 128/206 (62.14%), Query Frame = 1


Query: 1   NEKEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPP-SFSSAPLSLHASGDNKED 60
           NEKE EM+IG+PTDVKHVAHIGWDGPSV SPSWMNEFKAP   FSSAP  L+++G+ KED
Sbjct: 22  NEKEPEMQIGYPTDVKHVAHIGWDGPSVTSPSWMNEFKAPAGGFSSAP--LNSNGEPKED 81

Query: 61  VSVKWVSEDRPSRRVAKGSSSSAKNLTADVTKTSKHPSSSSTTSSSTESPTCRERSSERQ 120
            S+ WVSED  SRR ++  S        ++ K S+ P  SST     ESPT RE++ + +
Sbjct: 82  NSITWVSEDSSSRRGSR--SRGIDRDLPELPKASRKP--SSTERLDGESPT-REKTDKPK 141

Query: 121 KTRRSSKSKEPSSSDNNNNNHSPTLS--------LPDVPRQTRRKKTTRTKPHLAPETYK 180
           ++R+SS++     +D  +  HS   S        LPD+P++TRRKK+       A    K
Sbjct: 142 QSRKSSRNATKDLADGKSTRHSKDQSQASDSLSNLPDIPKKTRRKKSKDGSNSKASRA-K 201

Query: 181 SPHSDPGSTTATGSISLSKDSDLCQT 198
           +   D    + +GSIS S + +LC+T
Sbjct: 202 AQALDADCGSDSGSISNSLNGELCET 219

[Close]

BLAST of Cucsa.349000.1 vs. NCBI nr
Match: gi|566156070|ref|XP_006386214.1| (hypothetical protein POPTR_0002s03680g [Populus trichocarpa])

HSP 1 Score: 149.1 bits (375), Expect = 8.4e-33
Identity = 92/209 (44.02%), Postives = 124/209 (59.33%), Query Frame = 1


Query: 3   KEAEMKIGHPTDVKHVAHIGWDGPSVNSPSWMNEFKAPPSFSSAPLSLHASGDNKEDVSV 62
           KE EM+IG+PTDVKHVAHIGWDGPS+NSPSWM EFK+PP FSSAPLSL    D+KE+ SV
Sbjct: 25  KEPEMQIGYPTDVKHVAHIGWDGPSINSPSWMTEFKSPPEFSSAPLSL--DQDSKEEGSV 84

Query: 63  KWVSE--DRPSRRV------AKGSSSSAKNLTA-DVTKTSKHPSSSSTTSSSTESPTCRE 122
           KWVSE   R   R       A GS   ++N  A D+ +  K     S+T +S ESP+ +E
Sbjct: 85  KWVSEGSSRKGSRAPNSPPGAPGSPVGSQNSPARDLPELPKSSRRRSSTGTSAESPS-KE 144

Query: 123 RSSERQKTRRSSK--SKEPSSSDNNNNNH-------SPTLSLPDVPRQTRRKKTTRTKPH 182
           +S + +++RRSS+  +K+       + NH        P   LP++P++TRRKK+      
Sbjct: 145 KSDKPKQSRRSSRNGTKDLLDGSKTSRNHKDPSVENKPPSDLPEIPKKTRRKKSKDASVG 204

Query: 183 LAPETYKSPHSDPGSTTATGSISLSKDSD 194
            +    +S    P S    GS  +SK S+
Sbjct: 205 ESSSRSRSRSKVPASEGDEGSEMISKSSN 230

The following BLAST results are available for this feature:

BLAST of Cucsa.349000.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIC7_ARATH	8.2e-20	37.11	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana GN=RIC7 PE=1 SV=1	[more]
RIC6_ARATH	1.8e-19	38.79	CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana GN=RIC6 PE=1 SV=1	[more]
RIC8_ARATH	1.8e-14	34.54	CRIB domain-containing protein RIC8 OS=Arabidopsis thaliana GN=RIC8 PE=2 SV=1	[more]
RIC5_ARATH	1.5e-13	32.93	CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana GN=RIC5 PE=1 SV=1	[more]
RIC3_ARATH	2.2e-12	28.92	CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana GN=RIC3 PE=1 SV=1	[more]

BLAST of Cucsa.349000.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF43_CUCSA	3.1e-106	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088140 PE=4 SV=1	[more]
B9SV18_RICCO	8.2e-35	46.12	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0259080 PE=4 SV=1	[more]
U5GNR4_POPTR	5.9e-33	44.02	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03680g PE=4 SV=1	[more]
M5W154_PRUPE	5.0e-32	42.50	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023388mg PE=4 SV=1	[more]
A0A0A0L7D1_CUCSA	1.9e-31	45.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G374200 PE=4 SV=1	[more]

BLAST of Cucsa.349000.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28556.1	4.6e-21	37.11	PAK-box/P21-Rho-binding family protein	[more]
AT2G20430.1	1.0e-20	38.79	ROP-interactive CRIB motif-containing protein 6	[more]
AT1G03982.1	9.9e-16	34.54	PAK-box/P21-Rho-binding family protein	[more]
AT3G23380.1	8.4e-15	32.93	ROP-interactive CRIB motif-containing protein 5	[more]
AT1G04450.1	1.2e-13	28.92	ROP-interactive CRIB motif-containing protein 3	[more]

BLAST of Cucsa.349000.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191182\|gb\|KGN46386.1\|	4.4e-106	100.00	hypothetical protein Csa_6G088140 [Cucumis sativus]	[more]
gi\|659120438\|ref\|XP_008460194.1\|	1.2e-87	89.34	PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo]	[more]
gi\|223530665\|gb\|EEF32538.1\|	1.2e-34	46.12	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000945521\|ref\|XP_015581245.1\|	1.2e-34	46.12	PREDICTED: CRIB domain-containing protein RIC7 [Ricinus communis]	[more]
gi\|566156070\|ref\|XP_006386214.1\|	8.4e-33	44.02	hypothetical protein POPTR_0002s03680g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000095	CRIB_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.349000	Cucsa.349000	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.349000.1	Cucsa.349000.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.349000.1.CDS.3	Cucsa.349000.1.CDS.3	CDS
Cucsa.349000.1.CDS.2	Cucsa.349000.1.CDS.2	CDS
Cucsa.349000.1.CDS.1	Cucsa.349000.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	GENE3D	G3DSA:3.90.810.10		coord: 2..38 score: 4.6
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 8..39 score: 4.
IPR000095	CRIB domain	SMART	SM00285	PBD_5	coord: 9..40 score: 4.
IPR000095	CRIB domain	PROFILE	PS50108	CRIB	coord: 9..22 score: 8
None	No IPR available	PANTHER	PTHR23177	MKIAA1688 PROTEIN	coord: 141..160 score: 4.4E-29coord: 1..76 score: 4.4