Cucsa.322390.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGAAGAAATCGCCAATGGCTTCCCGGCTGCAGAAAGCATTGATGAAACTCAAGGCAGTTCTCCGTCTCTGTCTCCTTCCCCGGCAACGGTCACGACGGCTCGGATCATTCGATTCCGACGACGATCAAAAAGTAGGTATACGGATTGTGTTGGAAGATCAGAGTAGAATCGCTGAGAGTTCTTTTGTGAGAAAGCTTGAGCGTGCTTCCAGTTCAAGATACGGAGGCTATGAAGAAGATGTCGATCAACGAGCGGAGATTTTCATCGAGAATTTCCGGCGTCAACTGAGGTTAGAACGACAGATTTCTTTGCAATTGAGGTATTATAGAGTTAATAGCTACGAAACAGATTATGAACAGAGATCTCCGTCGTCGATTACGTGA ATGGCAGAGAAGAAATCGCCAATGGCTTCCCGGCTGCAGAAAGCATTGATGAAACTCAAGGCAGTTCTCCGTCTCTGTCTCCTTCCCCGGCAACGGTCACGACGGCTCGGATCATTCGATTCCGACGACGATCAAAAAGTAGGTATACGGATTGTGTTGGAAGATCAGAGTAGAATCGCTGAGAGTTCTTTTGTGAGAAAGCTTGAGCGTGCTTCCAGTTCAAGATACGGAGGCTATGAAGAAGATGTCGATCAACGAGCGGAGATTTTCATCGAGAATTTCCGGCGTCAACTGAGGTTAGAACGACAGATTTCTTTGCAATTGAGGTATTATAGAGTTAATAGCTACGAAACAGATTATGAACAGAGATCTCCGTCGTCGATTACGTGA ATGGCAGAGAAGAAATCGCCAATGGCTTCCCGGCTGCAGAAAGCATTGATGAAACTCAAGGCAGTTCTCCGTCTCTGTCTCCTTCCCCGGCAACGGTCACGACGGCTCGGATCATTCGATTCCGACGACGATCAAAAAGTAGGTATACGGATTGTGTTGGAAGATCAGAGTAGAATCGCTGAGAGTTCTTTTGTGAGAAAGCTTGAGCGTGCTTCCAGTTCAAGATACGGAGGCTATGAAGAAGATGTCGATCAACGAGCGGAGATTTTCATCGAGAATTTCCGGCGTCAACTGAGGTTAGAACGACAGATTTCTTTGCAATTGAGGTATTATAGAGTTAATAGCTACGAAACAGATTATGAACAGAGATCTCCGTCGTCGATTACGTGA MAEKKSPMASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRKLERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETDYEQRSPSSIT*
BLAST of Cucsa.322390.1 vs. TrEMBL
Match: A0A0A0L4Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G004530 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 7.9e-63 Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. TrEMBL
Match: A0A0A0L6A3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G004520 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19 Identity = 70/123 (56.91%), Postives = 77/123 (62.60%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. TrEMBL
Match: B9ILG0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s03620g PE=4 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 2.2e-12 Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. TrEMBL
Match: B9N684_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s28830g PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 6.4e-12 Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. TrEMBL
Match: V4UGU4_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10010207mg PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 5.4e-11 Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. TAIR10
Match: AT5G57510.1 (AT5G57510.1 unknown protein) HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08 Identity = 45/137 (32.85%), Postives = 70/137 (51.09%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. NCBI nr
Match: gi|700200554|gb|KGN55687.1| (hypothetical protein Csa_3G004530 [Cucumis sativus]) HSP 1 Score: 247.7 bits (631), Expect = 1.1e-62 Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. NCBI nr
Match: gi|778688278|ref|XP_011652707.1| (PREDICTED: uncharacterized protein LOC105435054 [Cucumis sativus]) HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58 Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. NCBI nr
Match: gi|700200553|gb|KGN55686.1| (hypothetical protein Csa_3G004520 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 2.0e-19 Identity = 70/123 (56.91%), Postives = 77/123 (62.60%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. NCBI nr
Match: gi|566214045|ref|XP_002324391.2| (hypothetical protein POPTR_0018s03620g [Populus trichocarpa]) HSP 1 Score: 80.1 bits (196), Expect = 3.1e-12 Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 1
BLAST of Cucsa.322390.1 vs. NCBI nr
Match: gi|566178670|ref|XP_006382145.1| (hypothetical protein POPTR_0006s28830g [Populus trichocarpa]) HSP 1 Score: 78.6 bits (192), Expect = 9.1e-12 Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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