Cucsa.252710.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.252710.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Transmembrane protein, putative
Location	scaffold02229 : 1587749 .. 1589141 (+)
Sequence length	795

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCACACATGATGATCTTCTTCCAAGTCCAAAGAGCTCTGAATTGGGCAGCAAAATGGGTACTTTTCTTATCATTTTGACCATTCTCTGTGGTCTATGTTGCTTCATTCTTTGCCTCATTGCTGAGACCACTCGTTCTCAGGTACCAAATTAACTCTATATGATGATATTGACCATTTTAAACTTAATTTTGAATGCTTTGTGTTATCTACAAGACCTTGTGTCTATATGTGTGCAGCAGTGTGTTCTTTTTtAGGTGGGTGGGAATCAACTTTGAGGTTGATAATACATGCATTTTATACGACGATTGAATTAAGCGATTAATTGTAGTGTGGAAATTAAATATTGTAATAATTCTAGATGTATATAGTAAATTTTTTTtCTGTTTTGGTACAACCTTGTTTGCATTTAATTGTCTTTAGGATTTTTCTTTTTCTTTTTTGTTCATACTTGATAGGTGATATGGATGGGTATAGATGAAAATAATAAGGAAAAAaGGAGATGCTCGTACAGCGGCAGCGGGAAGACACCGCTGCTGTGCACGGCGAGCGCGTTTCTGGGGATGGCGGTGATGATGGTGGTGCAACATTTGTATGTGTTGATTGCAGTGAGTAAGTCAGCTCCTCCTGCTCTCATTGCTTGGGATCCTTCTTTTGCAACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGTAAATTATCAAAACAACTAATCATAACTCCATTTTCCATTTATTCCCTTAAACTCACCAATTTTTCCACTTTAGTTTTTTCATAAAaTTTtAAATTTATCATAACCCAACTATATACTGCTTTACTGTGTGAGTTGATTATATTTCAATCGATAATAAGAGGAGTAATGTAACAATGATGTATCTCGTAAAGTTTTACCTATTGTACCCGTGTAGACAAGTTTTTTtCTTTAAATATGTAATGGGGTGATTTAATTTACAATGACAGGATAAGTTTTGCAGTTGGAGAAATTTTATTGTTAATAGGATTGAGTGTGGAGTCAGGGCATCTTAACAATTGGTCAACTCCAAAAGAAAGCTGTTTGGTCATCAAAGAAGGTTTGTTCTCAGCTGCCGGAGTTTTTCAATTGGCCACAGTCTTCCTTGCCGCCGGTCTCTACATGACCGCGGTCCGAGCACAGAGAATGTTTGAACAGCAAGAAAATGTGAGAAGAGAGGTATTGGAAAGTTACCATATCCACAGTTCTCCACCGCGGTCATTGTCGTCGCCACCGCTGCAGCCAATGCCGCCCATCGCAAGAGAGGACCCTGTAATTAGACATAGCCAACACCATCAAGAGCGGGCTCCTTTCTGGTCTCTGCTTCAATCTACTGCCCCTTTTTGCAAACTCTCTGCTTAA

mRNA sequence

ATGGCTGTCACACATGATGATCTTCTTCCAAGTCCAAAGAGCTCTGAATTGGGCAGCAAAATGGGTACTTTTCTTATCATTTTGACCATTCTCTGTGGTCTATGTTGCTTCATTCTTTGCCTCATTGCTGAGACCACTCGTTCTCAGGTGGATGAAAATAATAAGGAAAAAAGGAGATGCTCGTACAGCGGCAGCGGGAAGACACCGCTGCTGTGCACGGCGAGCGCGTTTCTGGGGATGGCGGTGATGATGGTGGTGCAACATTTGTATGTGTTGATTGCAGTGAGTAAGTCAGCTCCTCCTGCTCTCATTGCTTGGGATCCTTCTTTTGCAACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGATAAGTTTTGCAGTTGGAGAAATTTTATTGTTAATAGGATTGAGTGTGGAGTCAGGGCATCTTAACAATTGGTCAACTCCAAAAGAAAGCTGTTTGGTCATCAAAGAAGGTTTGTTCTCAGCTGCCGGAGTTTTTCAATTGGCCACAGTCTTCCTTGCCGCCGGTCTCTACATGACCGCGGTCCGAGCACAGAGAATGTTTGAACAGCAAGAAAATGTGAGAAGAGAGGTATTGGAAAGTTACCATATCCACAGTTCTCCACCGCGGTCATTGTCGTCGCCACCGCTGCAGCCAATGCCGCCCATCGCAAGAGAGGACCCTGTAATTAGACATAGCCAACACCATCAAGAGCGGGCTCCTTTCTGGTCTCTGCTTCAATCTACTGCCCCTTTTTGCAAACTCTCTGCTTAA

Coding sequence (CDS)

ATGGCTGTCACACATGATGATCTTCTTCCAAGTCCAAAGAGCTCTGAATTGGGCAGCAAAATGGGTACTTTTCTTATCATTTTGACCATTCTCTGTGGTCTATGTTGCTTCATTCTTTGCCTCATTGCTGAGACCACTCGTTCTCAGGTGGATGAAAATAATAAGGAAAAAaGGAGATGCTCGTACAGCGGCAGCGGGAAGACACCGCTGCTGTGCACGGCGAGCGCGTTTCTGGGGATGGCGGTGATGATGGTGGTGCAACATTTGTATGTGTTGATTGCAGTGAGTAAGTCAGCTCCTCCTGCTCTCATTGCTTGGGATCCTTCTTTTGCAACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGATAAGTTTTGCAGTTGGAGAAATTTTATTGTTAATAGGATTGAGTGTGGAGTCAGGGCATCTTAACAATTGGTCAACTCCAAAAGAAAGCTGTTTGGTCATCAAAGAAGGTTTGTTCTCAGCTGCCGGAGTTTTTCAATTGGCCACAGTCTTCCTTGCCGCCGGTCTCTACATGACCGCGGTCCGAGCACAGAGAATGTTTGAACAGCAAGAAAATGTGAGAAGAGAGGTATTGGAAAGTTACCATATCCACAGTTCTCCACCGCGGTCATTGTCGTCGCCACCGCTGCAGCCAATGCCGCCCATCGCAAGAGAGGACCCTGTAATTAGACATAGCCAACACCATCAAGAGCGGGCTCCTTTCTGGTCTCTGCTTCAATCTACTGCCCCTTTTTGCAAACTCTCTGCTTAA

Protein sequence

MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVIRHSQHHQERAPFWSLLQSTAPFCKLSA*

Homology

[Close]

BLAST of Cucsa.252710.1 vs. TrEMBL
Match: A0A0A0L805_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165660 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 2.6e-145
Identity = 264/269 (98.14%), Postives = 264/269 (98.14%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV-----DENNK 60
           MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV     DENNK
Sbjct: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 60

Query: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120
           EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS
Sbjct: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120

Query: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180
           LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL
Sbjct: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180

Query: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240
           ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP
Sbjct: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240

Query: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           VIRHSQHHQERAPFWSLLQSTAPFCKLSA
Sbjct: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 269

[Close]

BLAST of Cucsa.252710.1 vs. TrEMBL
Match: A0A067FWV7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035800mg PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.0e-85
Identity = 163/266 (61.28%), Postives = 207/266 (77.82%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKR--- 61
           A+TH DL PSP+ +E GSK G  LI+ TILCGLCCFILCLIAE TRSQ+   +  KR   
Sbjct: 6   AITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTWESTHKRGVE 65

Query: 62  -RCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLT 121
            +C YSGSGK PLLC A+AF+G+AV MV++H+Y+LIA+SKS PPAL++WDP++   KSLT
Sbjct: 66  NQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNYLPVKSLT 125

Query: 122 FQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLAT 181
           +QA FFFV+TWI FAVGEILLLIGLSVESGHL NWS P+ +CL+IK+GLFSAAGVF L  
Sbjct: 126 WQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLIIKQGLFSAAGVFALLA 185

Query: 182 VFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVI 241
           VFLAAGLY+TA+RAQR+ ++QE+VRREVLE+  +++SPP+   SP L  +  +ARE+PV 
Sbjct: 186 VFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQ---SPRLSIITTMARENPVR 245

Query: 242 RHSQHHQERAPFWSLLQSTAPFCKLS 264
           R +Q  +++   W+   S A F K S
Sbjct: 246 RENQLEEQQQSTWA--SSFASFSKRS 266

[Close]

BLAST of Cucsa.252710.1 vs. TrEMBL
Match: V4U0C6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007083mg PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 5.2e-85
Identity = 163/266 (61.28%), Postives = 206/266 (77.44%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVD----ENNKEK 61
           A+TH DL PSP+ +E GSK G  LI+ TILCGLCCFILCLIAE TRSQ+         E+
Sbjct: 6   AITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTWESTHKKGEE 65

Query: 62  RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLT 121
            +C YSGSGK PLLC A+AF+G+AV MV++H+Y+LIA+SKS PPAL++WDP++   KSLT
Sbjct: 66  NQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNYLPVKSLT 125

Query: 122 FQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLAT 181
           +QA FFFV+TWI FAVGEILLLIGLSVESGHL NWS P+ +CLVIK+GLFSAAGVF L  
Sbjct: 126 WQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLVIKQGLFSAAGVFALLA 185

Query: 182 VFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVI 241
           VFLAAGLY+TA+RAQR+ ++QE+VRREVLE+  +++SPP+   SP L  +  +ARE+PV 
Sbjct: 186 VFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQ---SPRLSIITTMARENPVR 245

Query: 242 RHSQHHQERAPFWSLLQSTAPFCKLS 264
           R +Q  +++   W+   S A F K S
Sbjct: 246 RENQLEEQQQSTWA--SSFASFSKRS 266

[Close]

BLAST of Cucsa.252710.1 vs. TrEMBL
Match: A0A061ENR4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.2e-81
Identity = 158/243 (65.02%), Postives = 194/243 (79.84%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQ-----VDENNK 60
           +AVTH DL PS +S+ELGS+ G  L++LTILCGL CFILCLIAE TRSQ      D N K
Sbjct: 15  VAVTHADLAPSRRSTELGSRTGVVLMVLTILCGLFCFILCLIAEATRSQERWVGTDTNRK 74

Query: 61  E-KRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSK 120
           E K  C+YSGSGKTPLLC A AF+G+A  MVV+H+Y+LIAVSKS PPAL++WDP  + +K
Sbjct: 75  EVKNECAYSGSGKTPLLCAAVAFVGLAAAMVVEHMYMLIAVSKSPPPALLSWDPVSSRAK 134

Query: 121 SLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQ 180
           +LT+QA FFFV TW+ F+VGEILLLIGLSVESGHL NWS P+ESCL+I+EGLF AAGVF 
Sbjct: 135 TLTWQAGFFFVMTWLCFSVGEILLLIGLSVESGHLKNWSKPRESCLIIREGLFCAAGVFS 194

Query: 181 LATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIARED 238
           L TVFLAAGLY+TA+ AQ+MF++Q NV++EVL +  +++SPP    SPP   M  +ARED
Sbjct: 195 LLTVFLAAGLYLTALHAQKMFQEQRNVQQEVLATSALYASPP---GSPP-HRMTTVARED 253

[Close]

BLAST of Cucsa.252710.1 vs. TrEMBL
Match: A0A061EP99_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.7e-80
Identity = 154/237 (64.98%), Postives = 191/237 (80.59%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKRRC 60
           +AVTH DL PS +S+ELGS+ G  L++LTILCGL CFILCLIAE TRSQ     + K  C
Sbjct: 15  VAVTHADLAPSRRSTELGSRTGVVLMVLTILCGLFCFILCLIAEATRSQ-----EVKNEC 74

Query: 61  SYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLTFQA 120
           +YSGSGKTPLLC A AF+G+A  MVV+H+Y+LIAVSKS PPAL++WDP  + +K+LT+QA
Sbjct: 75  AYSGSGKTPLLCAAVAFVGLAAAMVVEHMYMLIAVSKSPPPALLSWDPVSSRAKTLTWQA 134

Query: 121 AFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLATVFL 180
            FFFV TW+ F+VGEILLLIGLSVESGHL NWS P+ESCL+I+EGLF AAGVF L TVFL
Sbjct: 135 GFFFVMTWLCFSVGEILLLIGLSVESGHLKNWSKPRESCLIIREGLFCAAGVFSLLTVFL 194

Query: 181 AAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVI 238
           AAGLY+TA+ AQ+MF++Q NV++EVL +  +++SPP    SPP   M  +AREDP+I
Sbjct: 195 AAGLYLTALHAQKMFQEQRNVQQEVLATSALYASPP---GSPP-HRMTTVAREDPMI 242

[Close]

BLAST of Cucsa.252710.1 vs. TAIR10
Match: AT5G49320.1 (AT5G49320.1 Protein of unknown function (DUF1218))

HSP 1 Score: 273.5 bits (698), Expect = 1.4e-73
Identity = 137/232 (59.05%), Postives = 172/232 (74.14%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKRRCS 61
           AVTH DL+P+PK+++L SK G F+ +LTI+ GL CF+LCL AE TRSQ    +K    C 
Sbjct: 8   AVTHQDLVPNPKTTDLSSKTGIFIAVLTIIFGLSCFVLCLYAEATRSQATWGSKT---CV 67

Query: 62  YSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLTFQAA 121
           Y+GSGKTPLLC A AF+G+AV MV  H+Y+LIAV+ S    L+ WDP    +K LTFQAA
Sbjct: 68  YNGSGKTPLLCGAIAFVGLAVAMVGFHMYLLIAVTTSPSLVLVEWDPDSVPAKRLTFQAA 127

Query: 122 FFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLATVFLA 181
           FFFVSTW+ F VGE+LLL+ LSVESGHL NWS PK SCLVI++GLFSAAGVF L TVFLA
Sbjct: 128 FFFVSTWVCFGVGEVLLLVALSVESGHLKNWSKPKPSCLVIRQGLFSAAGVFSLITVFLA 187

Query: 182 AGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIARE 234
            GLY+TA++A R+ +  EN  RE++E+  +++SPPRS    P   M  +ARE
Sbjct: 188 TGLYLTALQAHRISKDLENTHREIIEASVLYASPPRS----PTNRMATVARE 232

[Close]

BLAST of Cucsa.252710.1 vs. NCBI nr
Match: gi|449433425|ref|XP_004134498.1| (PREDICTED: uncharacterized protein LOC101213882 isoform X1 [Cucumis sativus])

HSP 1 Score: 522.7 bits (1345), Expect = 3.7e-145
Identity = 264/269 (98.14%), Postives = 264/269 (98.14%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV-----DENNK 60
           MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV     DENNK
Sbjct: 8   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 67

Query: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120
           EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS
Sbjct: 68  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 127

Query: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180
           LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL
Sbjct: 128 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 187

Query: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240
           ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP
Sbjct: 188 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 247

Query: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           VIRHSQHHQERAPFWSLLQSTAPFCKLSA
Sbjct: 248 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 276

[Close]

BLAST of Cucsa.252710.1 vs. NCBI nr
Match: gi|700202016|gb|KGN57149.1| (hypothetical protein Csa_3G165660 [Cucumis sativus])

HSP 1 Score: 522.7 bits (1345), Expect = 3.7e-145
Identity = 264/269 (98.14%), Postives = 264/269 (98.14%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV-----DENNK 60
           MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV     DENNK
Sbjct: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 60

Query: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120
           EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS
Sbjct: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120

Query: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180
           LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL
Sbjct: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180

Query: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240
           ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP
Sbjct: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240

Query: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           VIRHSQHHQERAPFWSLLQSTAPFCKLSA
Sbjct: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 269

[Close]

BLAST of Cucsa.252710.1 vs. NCBI nr
Match: gi|659076902|ref|XP_008438924.1| (PREDICTED: uncharacterized protein LOC103483879 [Cucumis melo])

HSP 1 Score: 507.7 bits (1306), Expect = 1.2e-140
Identity = 257/270 (95.19%), Postives = 261/270 (96.67%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQ-----VDENNKE 61
           AVTHDDLLPSPKSSELGSK+GTFLIILTILCGLCCFILCLIAE+TRSQ     +DENNKE
Sbjct: 10  AVTHDDLLPSPKSSELGSKLGTFLIILTILCGLCCFILCLIAESTRSQAIWMGIDENNKE 69

Query: 62  KRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSL 121
           KRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSL
Sbjct: 70  KRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSL 129

Query: 122 TFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLA 181
           TFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWS PKESCLVIKEGLFSAAGVFQLA
Sbjct: 130 TFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSAPKESCLVIKEGLFSAAGVFQLA 189

Query: 182 TVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLS--SPPLQPMPPIARED 241
           TVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLS  SPPLQPMPPIARED
Sbjct: 190 TVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSLASPPLQPMPPIARED 249

Query: 242 PVIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           PVIRHS HHQ+RAPFWSLLQSTAPFCKLSA
Sbjct: 250 PVIRHSHHHQDRAPFWSLLQSTAPFCKLSA 279

[Close]

BLAST of Cucsa.252710.1 vs. NCBI nr
Match: gi|778679010|ref|XP_011651070.1| (PREDICTED: uncharacterized protein LOC101213882 isoform X2 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 1.5e-117
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 50  VDENNKEKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPS 109
           +DENNKEKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPS
Sbjct: 23  IDENNKEKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPS 82

Query: 110 FATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSA 169
           FATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSA
Sbjct: 83  FATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSA 142

Query: 170 AGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPP 229
           AGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPP
Sbjct: 143 AGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPP 202

Query: 230 IAREDPVIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           IAREDPVIRHSQHHQERAPFWSLLQSTAPFCKLSA
Sbjct: 203 IAREDPVIRHSQHHQERAPFWSLLQSTAPFCKLSA 237

[Close]

BLAST of Cucsa.252710.1 vs. NCBI nr
Match: gi|641852969|gb|KDO71828.1| (hypothetical protein CISIN_1g035800mg [Citrus sinensis])

HSP 1 Score: 323.2 bits (827), Expect = 4.3e-85
Identity = 163/266 (61.28%), Postives = 207/266 (77.82%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKR--- 61
           A+TH DL PSP+ +E GSK G  LI+ TILCGLCCFILCLIAE TRSQ+   +  KR   
Sbjct: 6   AITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTWESTHKRGVE 65

Query: 62  -RCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLT 121
            +C YSGSGK PLLC A+AF+G+AV MV++H+Y+LIA+SKS PPAL++WDP++   KSLT
Sbjct: 66  NQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNYLPVKSLT 125

Query: 122 FQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLAT 181
           +QA FFFV+TWI FAVGEILLLIGLSVESGHL NWS P+ +CL+IK+GLFSAAGVF L  
Sbjct: 126 WQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLIIKQGLFSAAGVFALLA 185

Query: 182 VFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVI 241
           VFLAAGLY+TA+RAQR+ ++QE+VRREVLE+  +++SPP+   SP L  +  +ARE+PV 
Sbjct: 186 VFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQ---SPRLSIITTMARENPVR 245

Query: 242 RHSQHHQERAPFWSLLQSTAPFCKLS 264
           R +Q  +++   W+   S A F K S
Sbjct: 246 RENQLEEQQQSTWA--SSFASFSKRS 266

The following BLAST results are available for this feature:

BLAST of Cucsa.252710.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L805_CUCSA	2.6e-145	98.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165660 PE=4 SV=1	[more]
A0A067FWV7_CITSI	3.0e-85	61.28	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035800mg PE=4 SV=1	[more]
V4U0C6_9ROSI	5.2e-85	61.28	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007083mg PE=4 SV=1	[more]
A0A061ENR4_THECC	1.2e-81	65.02	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1	[more]
A0A061EP99_THECC	1.7e-80	64.98	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1	[more]

BLAST of Cucsa.252710.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49320.1	1.4e-73	59.05	Protein of unknown function (DUF1218)	[more]

BLAST of Cucsa.252710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433425\|ref\|XP_004134498.1\|	3.7e-145	98.14	PREDICTED: uncharacterized protein LOC101213882 isoform X1 [Cucumis sativus]	[more]
gi\|700202016\|gb\|KGN57149.1\|	3.7e-145	98.14	hypothetical protein Csa_3G165660 [Cucumis sativus]	[more]
gi\|659076902\|ref\|XP_008438924.1\|	1.2e-140	95.19	PREDICTED: uncharacterized protein LOC103483879 [Cucumis melo]	[more]
gi\|778679010\|ref\|XP_011651070.1\|	1.5e-117	99.53	PREDICTED: uncharacterized protein LOC101213882 isoform X2 [Cucumis sativus]	[more]
gi\|641852969\|gb\|KDO71828.1\|	4.3e-85	61.28	hypothetical protein CISIN_1g035800mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.252710	Cucsa.252710	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.252710.1	Cucsa.252710.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.252710.1.CDS.1	Cucsa.252710.1.CDS.1	CDS
Cucsa.252710.1.CDS.2	Cucsa.252710.1.CDS.2	CDS
Cucsa.252710.1.CDS.3	Cucsa.252710.1.CDS.3	CDS
Cucsa.252710.1.CDS.4	Cucsa.252710.1.CDS.4	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 76..178 score: 4.5
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 8..249 score: 6.1E
None	No IPR available	PANTHER	PTHR31769:SF2	SUBFAMILY NOT NAMED	coord: 8..249 score: 6.1E