Cucsa.252710 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.252710
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Transmembrane protein, putative
Location	scaffold02229 : 1587749 .. 1589141 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCACACATGATGATCTTCTTCCAAGTCCAAAGAGCTCTGAATTGGGCAGCAAAATGGGTACTTTTCTTATCATTTTGACCATTCTCTGTGGTCTATGTTGCTTCATTCTTTGCCTCATTGCTGAGACCACTCGTTCTCAGGTACCAAATTAACTCTATATGATGATATTGACCATTTTAAACTTAATTTTGAATGCTTTGTGTTATCTACAAGACCTTGTGTCTATATGTGTGCAGCAGTGTGTTCTTTTTtAGGTGGGTGGGAATCAACTTTGAGGTTGATAATACATGCATTTTATACGACGATTGAATTAAGCGATTAATTGTAGTGTGGAAATTAAATATTGTAATAATTCTAGATGTATATAGTAAATTTTTTTtCTGTTTTGGTACAACCTTGTTTGCATTTAATTGTCTTTAGGATTTTTCTTTTTCTTTTTTGTTCATACTTGATAGGTGATATGGATGGGTATAGATGAAAATAATAAGGAAAAAaGGAGATGCTCGTACAGCGGCAGCGGGAAGACACCGCTGCTGTGCACGGCGAGCGCGTTTCTGGGGATGGCGGTGATGATGGTGGTGCAACATTTGTATGTGTTGATTGCAGTGAGTAAGTCAGCTCCTCCTGCTCTCATTGCTTGGGATCCTTCTTTTGCAACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGTAAATTATCAAAACAACTAATCATAACTCCATTTTCCATTTATTCCCTTAAACTCACCAATTTTTCCACTTTAGTTTTTTCATAAAaTTTtAAATTTATCATAACCCAACTATATACTGCTTTACTGTGTGAGTTGATTATATTTCAATCGATAATAAGAGGAGTAATGTAACAATGATGTATCTCGTAAAGTTTTACCTATTGTACCCGTGTAGACAAGTTTTTTtCTTTAAATATGTAATGGGGTGATTTAATTTACAATGACAGGATAAGTTTTGCAGTTGGAGAAATTTTATTGTTAATAGGATTGAGTGTGGAGTCAGGGCATCTTAACAATTGGTCAACTCCAAAAGAAAGCTGTTTGGTCATCAAAGAAGGTTTGTTCTCAGCTGCCGGAGTTTTTCAATTGGCCACAGTCTTCCTTGCCGCCGGTCTCTACATGACCGCGGTCCGAGCACAGAGAATGTTTGAACAGCAAGAAAATGTGAGAAGAGAGGTATTGGAAAGTTACCATATCCACAGTTCTCCACCGCGGTCATTGTCGTCGCCACCGCTGCAGCCAATGCCGCCCATCGCAAGAGAGGACCCTGTAATTAGACATAGCCAACACCATCAAGAGCGGGCTCCTTTCTGGTCTCTGCTTCAATCTACTGCCCCTTTTTGCAAACTCTCTGCTTAA

mRNA sequence

ATGGCTGTCACACATGATGATCTTCTTCCAAGTCCAAAGAGCTCTGAATTGGGCAGCAAAATGGGTACTTTTCTTATCATTTTGACCATTCTCTGTGGTCTATGTTGCTTCATTCTTTGCCTCATTGCTGAGACCACTCGTTCTCAGGTGGATGAAAATAATAAGGAAAAAAGGAGATGCTCGTACAGCGGCAGCGGGAAGACACCGCTGCTGTGCACGGCGAGCGCGTTTCTGGGGATGGCGGTGATGATGGTGGTGCAACATTTGTATGTGTTGATTGCAGTGAGTAAGTCAGCTCCTCCTGCTCTCATTGCTTGGGATCCTTCTTTTGCAACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGATAAGTTTTGCAGTTGGAGAAATTTTATTGTTAATAGGATTGAGTGTGGAGTCAGGGCATCTTAACAATTGGTCAACTCCAAAAGAAAGCTGTTTGGTCATCAAAGAAGGTTTGTTCTCAGCTGCCGGAGTTTTTCAATTGGCCACAGTCTTCCTTGCCGCCGGTCTCTACATGACCGCGGTCCGAGCACAGAGAATGTTTGAACAGCAAGAAAATGTGAGAAGAGAGGTATTGGAAAGTTACCATATCCACAGTTCTCCACCGCGGTCATTGTCGTCGCCACCGCTGCAGCCAATGCCGCCCATCGCAAGAGAGGACCCTGTAATTAGACATAGCCAACACCATCAAGAGCGGGCTCCTTTCTGGTCTCTGCTTCAATCTACTGCCCCTTTTTGCAAACTCTCTGCTTAA

Coding sequence (CDS)

ATGGCTGTCACACATGATGATCTTCTTCCAAGTCCAAAGAGCTCTGAATTGGGCAGCAAAATGGGTACTTTTCTTATCATTTTGACCATTCTCTGTGGTCTATGTTGCTTCATTCTTTGCCTCATTGCTGAGACCACTCGTTCTCAGGTGGATGAAAATAATAAGGAAAAAaGGAGATGCTCGTACAGCGGCAGCGGGAAGACACCGCTGCTGTGCACGGCGAGCGCGTTTCTGGGGATGGCGGTGATGATGGTGGTGCAACATTTGTATGTGTTGATTGCAGTGAGTAAGTCAGCTCCTCCTGCTCTCATTGCTTGGGATCCTTCTTTTGCAACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGATAAGTTTTGCAGTTGGAGAAATTTTATTGTTAATAGGATTGAGTGTGGAGTCAGGGCATCTTAACAATTGGTCAACTCCAAAAGAAAGCTGTTTGGTCATCAAAGAAGGTTTGTTCTCAGCTGCCGGAGTTTTTCAATTGGCCACAGTCTTCCTTGCCGCCGGTCTCTACATGACCGCGGTCCGAGCACAGAGAATGTTTGAACAGCAAGAAAATGTGAGAAGAGAGGTATTGGAAAGTTACCATATCCACAGTTCTCCACCGCGGTCATTGTCGTCGCCACCGCTGCAGCCAATGCCGCCCATCGCAAGAGAGGACCCTGTAATTAGACATAGCCAACACCATCAAGAGCGGGCTCCTTTCTGGTCTCTGCTTCAATCTACTGCCCCTTTTTGCAAACTCTCTGCTTAA

Protein sequence

MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVIRHSQHHQERAPFWSLLQSTAPFCKLSA*

Homology

[Close]

BLAST of Cucsa.252710 vs. TrEMBL
Match: A0A0A0L805_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165660 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 2.6e-145
Identity = 264/269 (98.14%), Postives = 264/269 (98.14%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV-----DENNK 60
           MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV     DENNK
Sbjct: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 60

Query: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120
           EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS
Sbjct: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120

Query: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180
           LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL
Sbjct: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180

Query: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240
           ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP
Sbjct: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240

Query: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           VIRHSQHHQERAPFWSLLQSTAPFCKLSA
Sbjct: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 269

[Close]

BLAST of Cucsa.252710 vs. TrEMBL
Match: A0A067FWV7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035800mg PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.0e-85
Identity = 163/266 (61.28%), Postives = 207/266 (77.82%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKR--- 61
           A+TH DL PSP+ +E GSK G  LI+ TILCGLCCFILCLIAE TRSQ+   +  KR   
Sbjct: 6   AITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTWESTHKRGVE 65

Query: 62  -RCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLT 121
            +C YSGSGK PLLC A+AF+G+AV MV++H+Y+LIA+SKS PPAL++WDP++   KSLT
Sbjct: 66  NQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNYLPVKSLT 125

Query: 122 FQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLAT 181
           +QA FFFV+TWI FAVGEILLLIGLSVESGHL NWS P+ +CL+IK+GLFSAAGVF L  
Sbjct: 126 WQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLIIKQGLFSAAGVFALLA 185

Query: 182 VFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVI 241
           VFLAAGLY+TA+RAQR+ ++QE+VRREVLE+  +++SPP+   SP L  +  +ARE+PV 
Sbjct: 186 VFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQ---SPRLSIITTMARENPVR 245

Query: 242 RHSQHHQERAPFWSLLQSTAPFCKLS 264
           R +Q  +++   W+   S A F K S
Sbjct: 246 RENQLEEQQQSTWA--SSFASFSKRS 266

[Close]

BLAST of Cucsa.252710 vs. TrEMBL
Match: V4U0C6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007083mg PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 5.2e-85
Identity = 163/266 (61.28%), Postives = 206/266 (77.44%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVD----ENNKEK 61
           A+TH DL PSP+ +E GSK G  LI+ TILCGLCCFILCLIAE TRSQ+         E+
Sbjct: 6   AITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTWESTHKKGEE 65

Query: 62  RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLT 121
            +C YSGSGK PLLC A+AF+G+AV MV++H+Y+LIA+SKS PPAL++WDP++   KSLT
Sbjct: 66  NQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNYLPVKSLT 125

Query: 122 FQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLAT 181
           +QA FFFV+TWI FAVGEILLLIGLSVESGHL NWS P+ +CLVIK+GLFSAAGVF L  
Sbjct: 126 WQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLVIKQGLFSAAGVFALLA 185

Query: 182 VFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVI 241
           VFLAAGLY+TA+RAQR+ ++QE+VRREVLE+  +++SPP+   SP L  +  +ARE+PV 
Sbjct: 186 VFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQ---SPRLSIITTMARENPVR 245

Query: 242 RHSQHHQERAPFWSLLQSTAPFCKLS 264
           R +Q  +++   W+   S A F K S
Sbjct: 246 RENQLEEQQQSTWA--SSFASFSKRS 266

[Close]

BLAST of Cucsa.252710 vs. TrEMBL
Match: A0A061ENR4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.2e-81
Identity = 158/243 (65.02%), Postives = 194/243 (79.84%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQ-----VDENNK 60
           +AVTH DL PS +S+ELGS+ G  L++LTILCGL CFILCLIAE TRSQ      D N K
Sbjct: 15  VAVTHADLAPSRRSTELGSRTGVVLMVLTILCGLFCFILCLIAEATRSQERWVGTDTNRK 74

Query: 61  E-KRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSK 120
           E K  C+YSGSGKTPLLC A AF+G+A  MVV+H+Y+LIAVSKS PPAL++WDP  + +K
Sbjct: 75  EVKNECAYSGSGKTPLLCAAVAFVGLAAAMVVEHMYMLIAVSKSPPPALLSWDPVSSRAK 134

Query: 121 SLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQ 180
           +LT+QA FFFV TW+ F+VGEILLLIGLSVESGHL NWS P+ESCL+I+EGLF AAGVF 
Sbjct: 135 TLTWQAGFFFVMTWLCFSVGEILLLIGLSVESGHLKNWSKPRESCLIIREGLFCAAGVFS 194

Query: 181 LATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIARED 238
           L TVFLAAGLY+TA+ AQ+MF++Q NV++EVL +  +++SPP    SPP   M  +ARED
Sbjct: 195 LLTVFLAAGLYLTALHAQKMFQEQRNVQQEVLATSALYASPP---GSPP-HRMTTVARED 253

[Close]

BLAST of Cucsa.252710 vs. TrEMBL
Match: A0A061EP99_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.7e-80
Identity = 154/237 (64.98%), Postives = 191/237 (80.59%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKRRC 60
           +AVTH DL PS +S+ELGS+ G  L++LTILCGL CFILCLIAE TRSQ     + K  C
Sbjct: 15  VAVTHADLAPSRRSTELGSRTGVVLMVLTILCGLFCFILCLIAEATRSQ-----EVKNEC 74

Query: 61  SYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLTFQA 120
           +YSGSGKTPLLC A AF+G+A  MVV+H+Y+LIAVSKS PPAL++WDP  + +K+LT+QA
Sbjct: 75  AYSGSGKTPLLCAAVAFVGLAAAMVVEHMYMLIAVSKSPPPALLSWDPVSSRAKTLTWQA 134

Query: 121 AFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLATVFL 180
            FFFV TW+ F+VGEILLLIGLSVESGHL NWS P+ESCL+I+EGLF AAGVF L TVFL
Sbjct: 135 GFFFVMTWLCFSVGEILLLIGLSVESGHLKNWSKPRESCLIIREGLFCAAGVFSLLTVFL 194

Query: 181 AAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVI 238
           AAGLY+TA+ AQ+MF++Q NV++EVL +  +++SPP    SPP   M  +AREDP+I
Sbjct: 195 AAGLYLTALHAQKMFQEQRNVQQEVLATSALYASPP---GSPP-HRMTTVAREDPMI 242

[Close]

BLAST of Cucsa.252710 vs. TAIR10
Match: AT5G49320.1 (AT5G49320.1 Protein of unknown function (DUF1218))

HSP 1 Score: 273.5 bits (698), Expect = 1.4e-73
Identity = 137/232 (59.05%), Postives = 172/232 (74.14%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKRRCS 61
           AVTH DL+P+PK+++L SK G F+ +LTI+ GL CF+LCL AE TRSQ    +K    C 
Sbjct: 8   AVTHQDLVPNPKTTDLSSKTGIFIAVLTIIFGLSCFVLCLYAEATRSQATWGSKT---CV 67

Query: 62  YSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLTFQAA 121
           Y+GSGKTPLLC A AF+G+AV MV  H+Y+LIAV+ S    L+ WDP    +K LTFQAA
Sbjct: 68  YNGSGKTPLLCGAIAFVGLAVAMVGFHMYLLIAVTTSPSLVLVEWDPDSVPAKRLTFQAA 127

Query: 122 FFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLATVFLA 181
           FFFVSTW+ F VGE+LLL+ LSVESGHL NWS PK SCLVI++GLFSAAGVF L TVFLA
Sbjct: 128 FFFVSTWVCFGVGEVLLLVALSVESGHLKNWSKPKPSCLVIRQGLFSAAGVFSLITVFLA 187

Query: 182 AGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIARE 234
            GLY+TA++A R+ +  EN  RE++E+  +++SPPRS    P   M  +ARE
Sbjct: 188 TGLYLTALQAHRISKDLENTHREIIEASVLYASPPRS----PTNRMATVARE 232

[Close]

BLAST of Cucsa.252710 vs. NCBI nr
Match: gi|449433425|ref|XP_004134498.1| (PREDICTED: uncharacterized protein LOC101213882 isoform X1 [Cucumis sativus])

HSP 1 Score: 522.7 bits (1345), Expect = 3.7e-145
Identity = 264/269 (98.14%), Postives = 264/269 (98.14%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV-----DENNK 60
           MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV     DENNK
Sbjct: 8   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 67

Query: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120
           EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS
Sbjct: 68  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 127

Query: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180
           LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL
Sbjct: 128 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 187

Query: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240
           ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP
Sbjct: 188 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 247

Query: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           VIRHSQHHQERAPFWSLLQSTAPFCKLSA
Sbjct: 248 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 276

[Close]

BLAST of Cucsa.252710 vs. NCBI nr
Match: gi|700202016|gb|KGN57149.1| (hypothetical protein Csa_3G165660 [Cucumis sativus])

HSP 1 Score: 522.7 bits (1345), Expect = 3.7e-145
Identity = 264/269 (98.14%), Postives = 264/269 (98.14%), Query Frame = 1


Query: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV-----DENNK 60
           MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQV     DENNK
Sbjct: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 60

Query: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120
           EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS
Sbjct: 61  EKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKS 120

Query: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180
           LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL
Sbjct: 121 LTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQL 180

Query: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240
           ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP
Sbjct: 181 ATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDP 240

Query: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           VIRHSQHHQERAPFWSLLQSTAPFCKLSA
Sbjct: 241 VIRHSQHHQERAPFWSLLQSTAPFCKLSA 269

[Close]

BLAST of Cucsa.252710 vs. NCBI nr
Match: gi|659076902|ref|XP_008438924.1| (PREDICTED: uncharacterized protein LOC103483879 [Cucumis melo])

HSP 1 Score: 507.7 bits (1306), Expect = 1.2e-140
Identity = 257/270 (95.19%), Postives = 261/270 (96.67%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQ-----VDENNKE 61
           AVTHDDLLPSPKSSELGSK+GTFLIILTILCGLCCFILCLIAE+TRSQ     +DENNKE
Sbjct: 10  AVTHDDLLPSPKSSELGSKLGTFLIILTILCGLCCFILCLIAESTRSQAIWMGIDENNKE 69

Query: 62  KRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSL 121
           KRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSL
Sbjct: 70  KRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSL 129

Query: 122 TFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLA 181
           TFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWS PKESCLVIKEGLFSAAGVFQLA
Sbjct: 130 TFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSAPKESCLVIKEGLFSAAGVFQLA 189

Query: 182 TVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLS--SPPLQPMPPIARED 241
           TVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLS  SPPLQPMPPIARED
Sbjct: 190 TVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSLASPPLQPMPPIARED 249

Query: 242 PVIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           PVIRHS HHQ+RAPFWSLLQSTAPFCKLSA
Sbjct: 250 PVIRHSHHHQDRAPFWSLLQSTAPFCKLSA 279

[Close]

BLAST of Cucsa.252710 vs. NCBI nr
Match: gi|778679010|ref|XP_011651070.1| (PREDICTED: uncharacterized protein LOC101213882 isoform X2 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 1.5e-117
Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 50  VDENNKEKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPS 109
           +DENNKEKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPS
Sbjct: 23  IDENNKEKRRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPS 82

Query: 110 FATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSA 169
           FATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSA
Sbjct: 83  FATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSA 142

Query: 170 AGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPP 229
           AGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPP
Sbjct: 143 AGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPP 202

Query: 230 IAREDPVIRHSQHHQERAPFWSLLQSTAPFCKLSA 265
           IAREDPVIRHSQHHQERAPFWSLLQSTAPFCKLSA
Sbjct: 203 IAREDPVIRHSQHHQERAPFWSLLQSTAPFCKLSA 237

[Close]

BLAST of Cucsa.252710 vs. NCBI nr
Match: gi|641852969|gb|KDO71828.1| (hypothetical protein CISIN_1g035800mg [Citrus sinensis])

HSP 1 Score: 323.2 bits (827), Expect = 4.3e-85
Identity = 163/266 (61.28%), Postives = 207/266 (77.82%), Query Frame = 1


Query: 2   AVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVDENNKEKR--- 61
           A+TH DL PSP+ +E GSK G  LI+ TILCGLCCFILCLIAE TRSQ+   +  KR   
Sbjct: 6   AITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTWESTHKRGVE 65

Query: 62  -RCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATSKSLT 121
            +C YSGSGK PLLC A+AF+G+AV MV++H+Y+LIA+SKS PPAL++WDP++   KSLT
Sbjct: 66  NQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNYLPVKSLT 125

Query: 122 FQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVFQLAT 181
           +QA FFFV+TWI FAVGEILLLIGLSVESGHL NWS P+ +CL+IK+GLFSAAGVF L  
Sbjct: 126 WQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLIIKQGLFSAAGVFALLA 185

Query: 182 VFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIAREDPVI 241
           VFLAAGLY+TA+RAQR+ ++QE+VRREVLE+  +++SPP+   SP L  +  +ARE+PV 
Sbjct: 186 VFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQ---SPRLSIITTMARENPVR 245

Query: 242 RHSQHHQERAPFWSLLQSTAPFCKLS 264
           R +Q  +++   W+   S A F K S
Sbjct: 246 RENQLEEQQQSTWA--SSFASFSKRS 266

The following BLAST results are available for this feature:

BLAST of Cucsa.252710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L805_CUCSA	2.6e-145	98.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165660 PE=4 SV=1	[more]
A0A067FWV7_CITSI	3.0e-85	61.28	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035800mg PE=4 SV=1	[more]
V4U0C6_9ROSI	5.2e-85	61.28	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007083mg PE=4 SV=1	[more]
A0A061ENR4_THECC	1.2e-81	65.02	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1	[more]
A0A061EP99_THECC	1.7e-80	64.98	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1	[more]

BLAST of Cucsa.252710 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49320.1	1.4e-73	59.05	Protein of unknown function (DUF1218)	[more]

BLAST of Cucsa.252710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433425\|ref\|XP_004134498.1\|	3.7e-145	98.14	PREDICTED: uncharacterized protein LOC101213882 isoform X1 [Cucumis sativus]	[more]
gi\|700202016\|gb\|KGN57149.1\|	3.7e-145	98.14	hypothetical protein Csa_3G165660 [Cucumis sativus]	[more]
gi\|659076902\|ref\|XP_008438924.1\|	1.2e-140	95.19	PREDICTED: uncharacterized protein LOC103483879 [Cucumis melo]	[more]
gi\|778679010\|ref\|XP_011651070.1\|	1.5e-117	99.53	PREDICTED: uncharacterized protein LOC101213882 isoform X2 [Cucumis sativus]	[more]
gi\|641852969\|gb\|KDO71828.1\|	4.3e-85	61.28	hypothetical protein CISIN_1g035800mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.252710.1	Cucsa.252710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 76..178 score: 4.5
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 8..249 score: 6.1E
None	No IPR available	PANTHER	PTHR31769:SF2	SUBFAMILY NOT NAMED	coord: 8..249 score: 6.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.252710	Cla021775	Watermelon (97103) v1	cgywmB479
Cucsa.252710	Csa3G165660	Cucumber (Chinese Long) v2	cgycuB366
Cucsa.252710	MELO3C006698	Melon (DHL92) v3.5.1	cgymeB439
Cucsa.252710	ClCG05G006400	Watermelon (Charleston Gray)	cgywcgB451
Cucsa.252710	CSPI03G14820	Wild cucumber (PI 183967)	cgycpiB383
Cucsa.252710	CmaCh00G004240	Cucurbita maxima (Rimu)	cgycmaB0706
Cucsa.252710	CmaCh06G015520	Cucurbita maxima (Rimu)	cgycmaB0727
Cucsa.252710	CmoCh14G016320	Cucurbita moschata (Rifu)	cgycmoB0700
Cucsa.252710	CmoCh06G015510	Cucurbita moschata (Rifu)	cgycmoB0718
Cucsa.252710	Lsi05G015760	Bottle gourd (USVL1VR-Ls)	cgylsiB420
Cucsa.252710	Cp4.1LG03g11770	Cucurbita pepo (Zucchini)	cgycpeB0682
Cucsa.252710	Cp4.1LG08g05170	Cucurbita pepo (Zucchini)	cgycpeB0687
Cucsa.252710	MELO3C006698.2	Melon (DHL92) v3.6.1	cgymedB432
Cucsa.252710	CsaV3_3G015020	Cucumber (Chinese Long) v3	cgycucB387
Cucsa.252710	Cla97C05G087990	Watermelon (97103) v2	cgywmbB452
Cucsa.252710	Bhi01G000764	Wax gourd	cgywgoB522
Cucsa.252710	Carg19636	Silver-seed gourd	carcgyB0329
Cucsa.252710	Carg23745	Silver-seed gourd	carcgyB1072

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.252710	Melon (DHL92) v3.6.1	cgymedB425
Cucsa.252710	Melon (DHL92) v3.6.1	cgymedB427
Cucsa.252710	Silver-seed gourd	carcgyB0083
Cucsa.252710	Silver-seed gourd	carcgyB0788
Cucsa.252710	Cucumber (Chinese Long) v3	cgycucB396
Cucsa.252710	Watermelon (97103) v2	cgywmbB453
Cucsa.252710	Wax gourd	cgywgoB512
Cucsa.252710	Cucumber (Gy14) v1	cgycgyB020
Cucsa.252710	Cucurbita maxima (Rimu)	cgycmaB0714
Cucsa.252710	Cucurbita maxima (Rimu)	cgycmaB0709
Cucsa.252710	Cucurbita maxima (Rimu)	cgycmaB0731
Cucsa.252710	Cucurbita moschata (Rifu)	cgycmoB0707
Cucsa.252710	Cucurbita moschata (Rifu)	cgycmoB0720
Cucsa.252710	Wild cucumber (PI 183967)	cgycpiB390
Cucsa.252710	Cucumber (Chinese Long) v2	cgycuB371
Cucsa.252710	Melon (DHL92) v3.5.1	cgymeB430
Cucsa.252710	Watermelon (Charleston Gray)	cgywcgB453
Cucsa.252710	Watermelon (97103) v1	cgywmB483
Cucsa.252710	Cucurbita pepo (Zucchini)	cgycpeB0671
Cucsa.252710	Cucurbita pepo (Zucchini)	cgycpeB0678
Cucsa.252710	Bottle gourd (USVL1VR-Ls)	cgylsiB412