Carg23745 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23745
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transmembrane protein, putative
Location	Cucurbita_argyrosperma_scaffold_213 : 337829 .. 339942 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGACAAAAGCTATGGCGGTAACACATGAGGATCTTCACCCAAGTCGAAGGAGCTCTGAATTAGGCAGCAAAATGGGGACTTTTCTCATCATTTTGACCGTCCTTTGTGGCCTTTGTTGCTTCATTCTTTGCCTCGTTGCCGAGTCTACTCGTTCTCAGGTACGTATCTCACCGACCCTTTTCACGATTTTTGTGTTCGGTATGATATTGTCAATAGAAATGTCTATTTAGCCTCCGGGGCTGGAGAATAGGATAAAAGAGTAAGAAGTGATTTCTCCATGTTAGCTAAATGGAGATGGAGATAGAGAATATATTCCTTGTCTATAACAGCCCAAGTCCACCGCTAGCATATATTGTTCTCTTTAAGCTTTCTCTTTCGGGCTTCCCCTCTTTTGGTTTTTTCCTTTCCGGCTTTCTCTCAAGGTGTACCACTAGCTAATTGATATCCCACATTGGTTAGGGAGGAGAATGTAACACCCTTTATCTGGGTGTGAGAAACTGTTCCTAGCTTCTTGAGGGGAAACCCGAGAAAGAAAGCCCAAAAAAGACAATATCTGCTACCGGTGAACTTGGACTATTACATTGTCTTTGTCCTTGCACCGCGCCCACCTCACCCCAAATAACTCTTCGGAGAATCTCGCAAAAATAGAGCAAATTTTGCGGGAATAAAAATGAAATAGGAGACAGAAACCAGAAATAGAGAGAATTTTGCTGAATAAAAATGAAATAGGAGAGAGAAACCAAACATGTTTTTTTAACAACGTACGAGGTAGGTTTAGATATGGGTTTGCATGTTTTTTCTGACCTTTTTCATAGGTAATATGGAAGGGTAGAGACGAGAATAATAACAAAAAGGGAGAGAAGAGATGCTGGTACAGCGGCAGTGGGAAGACGCCGCTGGTGTGCACGGCGAGCGCGTTTCTAGGCATGGCGGTGATGATGGTGGTGCAACATTTGTACGTGTTGATTGCAGTGAGTAAGTCGCCGCCGCCTGCTCTCATTGCTTGGGACCCTTCTTTTGCCACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGTAATCATCAACACCTCCATTATCTCTCTCCTTTATTCAAACCCAAGTTAAGCATATTCCTTCACCCCAATTTAATACTTTTCATATTCGACCACGAGCCACGACCCAAGCCCACCGATAACAAATATTGTCCTCTTTAGACTTTTTCCTTTCAGGGTTTCCCTCAAAGTTTTTAAAACGCGCCTCCAGTGAGAGGTTTCCACACCCTTATAAAAGAACGTTTCGTTCTCCTCTCCAATCGATGCGGGATCTCACGAAAGTCCAAAAAGAACAATATTTGCTACTGGTGAGCTTGATATTACAAATGGTATGAGGCAGACACGGGGCAATGTGCCGGTGGACACGAGGCATTGTGCCATAAAGGACACTGTGCCCCAAAGGGATTGGATTGGAGGGGTCCCAGATCGATTGAAGAAGGGAACGAGTGTCGGTGAAGACGCTGGGTCCCGAGAGGGAGTGAATTGTGATATTCTTTACAAGGGTGTGGAAACCTATTCCTTCTGCATAGGTTTTTAAAACTTTGAGGGAAAGCTAAGAGTGGACTGGTCGAGTCCACAAGACAATATCTGCTAACAGTGGACTTGGGCTAATGGCCCTCTCATTTCCATATCGGGTGGTTTGTTTTGGGTTGGCAGGATAAGTTTCTCAGTGGGAGAGATTTTACTATTGATAGGACTGAGCGTAGAATCAGGTCATCTCAAGGACTGGTGGAGTCCAAAAGAGAGTTGCTTGGTGATCAAAGAAGGTTTGTTCTCAGCAGCTGGGGTTTTTGAGCTGGCGACGGTGTTCCTCGCCGCCGGTCTATACATGACGGCGGTGCGAGCACAGAGATTGTTTGAAGATCAAGTAAACGTGAGAAGAGAGGTGCTGGAAAGTTACCATATCCACAGTTCGCCGCCCCGGTCGCCACCAGTGCAGCCCATGCCGCCAATTGCGAGAGAGGACCCTGTGATCAGACATAGCCATCATCCAGAGTCTCCCTTTTTGTTCTTGCTCCCATCTTCAGCTGCTTTCTGCAAACAGCTCTCTCGTTGA

mRNA sequence

ATGGGAAGGACAAAAGCTATGGCGGTAACACATGAGGATCTTCACCCAAGTCGAAGGAGCTCTGAATTAGGCAGCAAAATGGGGACTTTTCTCATCATTTTGACCGTCCTTTGTGGCCTTTGTTGCTTCATTCTTTGCCTCGTTGCCGAGTCTACTCGTTCTCAGGTAATATGGAAGGGTAGAGACGAGAATAATAACAAAAAGGGAGAGAAGAGATGCTGGTACAGCGGCAGTGGGAAGACGCCGCTGGTGTGCACGGCGAGCGCGTTTCTAGGCATGGCGGTGATGATGGTGGTGCAACATTTGTACGTGTTGATTGCAGTGAGTAAGTCGCCGCCGCCTGCTCTCATTGCTTGGGACCCTTCTTTTGCCACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGACTGGTGGAGTCCAAAAGAGAGTTGCTTGGTGATCAAAGAAGGTTTGTTCTCAGCAGCTGGGGTTTTTGAGCTGGCGACGGTGTTCCTCGCCGCCGGTCTATACATGACGGCGGTGCGAGCACAGAGATTGTTTGAAGATCAAGTAAACGTGAGAAGAGAGGTGCTGGAAAGTTACCATATCCACAGTTCGCCGCCCCGGTCGCCACCAGTGCAGCCCATGCCGCCAATTGCGAGAGAGGACCCTGTGATCAGACATAGCCATCATCCAGAGTCTCCCTTTTTGTTCTTGCTCCCATCTTCAGCTGCTTTCTGCAAACAGCTCTCTCGTTGA

Coding sequence (CDS)

ATGGGAAGGACAAAAGCTATGGCGGTAACACATGAGGATCTTCACCCAAGTCGAAGGAGCTCTGAATTAGGCAGCAAAATGGGGACTTTTCTCATCATTTTGACCGTCCTTTGTGGCCTTTGTTGCTTCATTCTTTGCCTCGTTGCCGAGTCTACTCGTTCTCAGGTAATATGGAAGGGTAGAGACGAGAATAATAACAAAAAGGGAGAGAAGAGATGCTGGTACAGCGGCAGTGGGAAGACGCCGCTGGTGTGCACGGCGAGCGCGTTTCTAGGCATGGCGGTGATGATGGTGGTGCAACATTTGTACGTGTTGATTGCAGTGAGTAAGTCGCCGCCGCCTGCTCTCATTGCTTGGGACCCTTCTTTTGCCACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGACTGGTGGAGTCCAAAAGAGAGTTGCTTGGTGATCAAAGAAGGTTTGTTCTCAGCAGCTGGGGTTTTTGAGCTGGCGACGGTGTTCCTCGCCGCCGGTCTATACATGACGGCGGTGCGAGCACAGAGATTGTTTGAAGATCAAGTAAACGTGAGAAGAGAGGTGCTGGAAAGTTACCATATCCACAGTTCGCCGCCCCGGTCGCCACCAGTGCAGCCCATGCCGCCAATTGCGAGAGAGGACCCTGTGATCAGACATAGCCATCATCCAGAGTCTCCCTTTTTGTTCTTGCTCCCATCTTCAGCTGCTTTCTGCAAACAGCTCTCTCGTTGA

Protein sequence

MGRTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKGRDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFATSKSLTFQAAFFFDWWSPKESCLVIKEGLFSAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPIAREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR

Homology

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BLAST of Carg23745 vs. NCBI nr
Match: XP_022934645.1 (uncharacterized protein LOC111441776 [Cucurbita moschata])

HSP 1 Score: 481.5 bits (1238), Expect = 1.7e-132
Identity = 247/273 (90.48%), Postives = 247/273 (90.48%), Query Frame = 0


Query: 1   MGRTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKG 60
           MGRTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKG
Sbjct: 1   MGRTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKG 60

Query: 61  RDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD 120
           RDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD
Sbjct: 61  RDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD 120

Query: 121 PSFATSKSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLF 180
           PSFATSKSLTFQAAFFF                          DWWSPKESCLVIKEGLF
Sbjct: 121 PSFATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLF 180

Query: 181 SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPI 240
           SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPI
Sbjct: 181 SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPI 240

Query: 241 AREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR 248
           AREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR
Sbjct: 241 AREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR 273

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BLAST of Carg23745 vs. NCBI nr
Match: XP_023540160.1 (uncharacterized protein LOC111800614 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 480.3 bits (1235), Expect = 3.9e-132
Identity = 246/273 (90.11%), Postives = 247/273 (90.48%), Query Frame = 0


Query: 1   MGRTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKG 60
           MGRTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKG
Sbjct: 1   MGRTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKG 60

Query: 61  RDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD 120
           RDENNNKKGEKRCWYSGSG+TPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD
Sbjct: 61  RDENNNKKGEKRCWYSGSGRTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD 120

Query: 121 PSFATSKSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLF 180
           PSFATSKSLTFQAAFFF                          DWWSPKESCLVIKEGLF
Sbjct: 121 PSFATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLF 180

Query: 181 SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPI 240
           SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPI
Sbjct: 181 SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPI 240

Query: 241 AREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR 248
           AREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR
Sbjct: 241 AREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR 273

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BLAST of Carg23745 vs. NCBI nr
Match: XP_022972325.1 (uncharacterized protein LOC111470898 [Cucurbita maxima] >XP_022975212.1 uncharacterized protein LOC111474297 [Cucurbita maxima] >XP_022975213.1 uncharacterized protein LOC111474298 [Cucurbita maxima])

HSP 1 Score: 475.7 bits (1223), Expect = 9.5e-131
Identity = 244/273 (89.38%), Postives = 245/273 (89.74%), Query Frame = 0


Query: 1   MGRTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKG 60
           MGR KAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIW G
Sbjct: 1   MGRRKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMG 60

Query: 61  RDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD 120
           RDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD
Sbjct: 61  RDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD 120

Query: 121 PSFATSKSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLF 180
           PSFATSKSLTFQAAFFF                          DWWSPKESCLVIKEGLF
Sbjct: 121 PSFATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLF 180

Query: 181 SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPI 240
           SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPP+QPMPPI
Sbjct: 181 SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPLQPMPPI 240

Query: 241 AREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR 248
           AREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR
Sbjct: 241 AREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR 273

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BLAST of Carg23745 vs. NCBI nr
Match: XP_004134498.1 (PREDICTED: uncharacterized protein LOC101213882 isoform X1 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 6.0e-93
Identity = 195/272 (71.69%), Postives = 209/272 (76.84%), Query Frame = 0


Query: 3   RTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKGRD 62
           R K MAVTH+DL PS +SSELGSKMGTFLIILT+LCGLCCFILCL+AE+TRSQVIW G D
Sbjct: 4   RKKNMAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGID 63

Query: 63  ENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPS 122
           ENN +K  +RC YSGSGKTPL+CTASAFLGMAVMMVVQHLYVLIAVSKS PPALIAWDPS
Sbjct: 64  ENNKEK--RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPS 123

Query: 123 FATSKSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLFSA 182
           FATSKSLTFQAAFFF                          +W +PKESCLVIKEGLFSA
Sbjct: 124 FATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSA 183

Query: 183 AGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPR---SPPVQPMPP 242
           AGV             MTAVRAQR+FE Q NVRREVLESYHIHSSPPR   SPP+QPMPP
Sbjct: 184 AGVXXXXXXXXXXXXXMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPP 243

Query: 243 IAREDPVIRHS-HHPE-SPFLFLLPSSAAFCK 244
           IAREDPVIRHS HH E +PF  LL S+A FCK
Sbjct: 244 IAREDPVIRHSQHHQERAPFWSLLQSTAPFCK 273

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BLAST of Carg23745 vs. NCBI nr
Match: KGN57149.1 (hypothetical protein Csa_3G165660 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 3.0e-92
Identity = 193/268 (72.01%), Postives = 207/268 (77.24%), Query Frame = 0


Query: 7   MAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKGRDENNN 66
           MAVTH+DL PS +SSELGSKMGTFLIILT+LCGLCCFILCL+AE+TRSQVIW G DENN 
Sbjct: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 60

Query: 67  KKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFATS 126
           +K  +RC YSGSGKTPL+CTASAFLGMAVMMVVQHLYVLIAVSKS PPALIAWDPSFATS
Sbjct: 61  EK--RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATS 120

Query: 127 KSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLFSAAGVF 186
           KSLTFQAAFFF                          +W +PKESCLVIKEGLFSAAGV 
Sbjct: 121 KSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVX 180

Query: 187 ELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPR---SPPVQPMPPIARE 244
                       MTAVRAQR+FE Q NVRREVLESYHIHSSPPR   SPP+QPMPPIARE
Sbjct: 181 XXXXXXXXXXXXMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIARE 240

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BLAST of Carg23745 vs. TAIR10
Match: AT5G49320.1 (Protein of unknown function (DUF1218))

HSP 1 Score: 214.9 bits (546), Expect = 5.5e-56
Identity = 118/243 (48.56%), Postives = 155/243 (63.79%), Query Frame = 0


Query: 1   MGRTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKG 60
           M RT+  AVTH+DL P+ ++++L SK G F+ +LT++ GL CF+LCL AE+TRSQ  W  
Sbjct: 1   MSRTRVRAVTHQDLVPNPKTTDLSSKTGIFIAVLTIIFGLSCFVLCLYAEATRSQATW-- 60

Query: 61  RDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD 120
                   G K C Y+GSGKTPL+C A AF+G+AV MV  H+Y+LIAV+ SP   L+ WD
Sbjct: 61  --------GSKTCVYNGSGKTPLLCGAIAFVGLAVAMVGFHMYLLIAVTTSPSLVLVEWD 120

Query: 121 PSFATSKSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLF 180
           P    +K LTFQAAFFF                          +W  PK SCLVI++GLF
Sbjct: 121 PDSVPAKRLTFQAAFFFVSTWVCFGVGEVLLLVALSVESGHLKNWSKPKPSCLVIRQGLF 180

Query: 181 SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPI 218
           SAAGVF L TVFLA GLY+TA++A R+ +D  N  RE++E+  +++SPPRS P   M  +
Sbjct: 181 SAAGVFSLITVFLATGLYLTALQAHRISKDLENTHREIIEASVLYASPPRS-PTNRMATV 232

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BLAST of Carg23745 vs. TrEMBL
Match: tr|A0A0A0L805|A0A0A0L805_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165660 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.0e-92
Identity = 193/268 (72.01%), Postives = 207/268 (77.24%), Query Frame = 0


Query: 7   MAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKGRDENNN 66
           MAVTH+DL PS +SSELGSKMGTFLIILT+LCGLCCFILCL+AE+TRSQVIW G DENN 
Sbjct: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 60

Query: 67  KKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFATS 126
           +K  +RC YSGSGKTPL+CTASAFLGMAVMMVVQHLYVLIAVSKS PPALIAWDPSFATS
Sbjct: 61  EK--RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATS 120

Query: 127 KSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLFSAAGVF 186
           KSLTFQAAFFF                          +W +PKESCLVIKEGLFSAAGV 
Sbjct: 121 KSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVX 180

Query: 187 ELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPR---SPPVQPMPPIARE 244
                       MTAVRAQR+FE Q NVRREVLESYHIHSSPPR   SPP+QPMPPIARE
Sbjct: 181 XXXXXXXXXXXXMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIARE 240

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BLAST of Carg23745 vs. TrEMBL
Match: tr|A0A1S3AY82|A0A1S3AY82_CUCME (uncharacterized protein LOC103483879 OS=Cucumis melo OX=3656 GN=LOC103483879 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 7.8e-81
Identity = 177/274 (64.60%), Postives = 191/274 (69.71%), Query Frame = 0


Query: 3   RTKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKGRD 62
           R    AVTH+DL PS +SSELG                       +AESTRSQ IW G D
Sbjct: 5   RKNMAAVTHDDLLPSPKSSELGXXXXXXXXXXXXXXXXXXXXXXXIAESTRSQAIWMGID 64

Query: 63  ENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPS 122
           ENN +K  +RC YSGSGKTPL+CTASAFLGMAVMMVVQHLYVLIAVSKS PPALIAWDPS
Sbjct: 65  ENNKEK--RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPS 124

Query: 123 FATSKSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLFSA 182
           FATSKSLTFQAAFFF                          +W +PKESCLVIKEGLFSA
Sbjct: 125 FATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSAPKESCLVIKEGLFSA 184

Query: 183 AGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPR-----SPPVQPM 242
           AGVF+LAT     GLYMTAVRAQR+FE Q NVRREVLESYHIHSSPPR     SPP+QPM
Sbjct: 185 AGVFQLATXXXXXGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSLASPPLQPM 244

Query: 243 PPIAREDPVIRHSHHPE--SPFLFLLPSSAAFCK 244
           PPIAREDPVIRHSHH +  +PF  LL S+A FCK
Sbjct: 245 PPIAREDPVIRHSHHHQDRAPFWSLLQSTAPFCK 276

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BLAST of Carg23745 vs. TrEMBL
Match: tr|A0A2N9EZ83|A0A2N9EZ83_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8037 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.4e-66
Identity = 141/254 (55.51%), Postives = 179/254 (70.47%), Query Frame = 0


Query: 7   MAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKGRDENNN 66
           MAVTH DL PSRRS++LGSK+G  L+ILT+LCGL CF+LCL++E+TRS+V W G   NN 
Sbjct: 1   MAVTHADLEPSRRSTDLGSKIGVLLMILTILCGLFCFVLCLISEATRSEVTWVG--TNNK 60

Query: 67  KKGEK-RCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFAT 126
            KGEK  C YSGSGKTPL+C A+AF+G+A+ MVVQH Y+LIA++KSPPPAL  WDP  A 
Sbjct: 61  GKGEKYECVYSGSGKTPLLCAAAAFVGLAIAMVVQHTYILIAITKSPPPALATWDPESAP 120

Query: 127 SKSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLFSAAGV 186
            K LT+QA FFF                          +W  P+ +CL+I+EGLFSAAGV
Sbjct: 121 IKYLTWQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWNRPRPTCLIIREGLFSAAGV 180

Query: 187 FELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPIAREDP 234
           F L TVFLAAGLY+TA+RAQ + ++  NVRREVLE+  I +SPP S P+Q +  IARE+P
Sbjct: 181 FSLTTVFLAAGLYLTALRAQTISQELENVRREVLETSAIFASPPLS-PLQGLTTIARENP 240

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BLAST of Carg23745 vs. TrEMBL
Match: tr|V4U0C6|V4U0C6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10007083mg PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 137/267 (51.31%), Postives = 185/267 (69.29%), Query Frame = 0


Query: 5   KAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKGRDEN 64
           K  A+TH DL PS + +E GSK G  LI+ T+LCGLCCFILCL+AE+TRSQ+ W    E+
Sbjct: 3   KRTAITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTW----ES 62

Query: 65  NNKKGEK-RCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSF 124
            +KKGE+ +C YSGSGK PL+C A+AF+G+AV MV++H+Y+LIA+SKSPPPAL++WDP++
Sbjct: 63  THKKGEENQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNY 122

Query: 125 ATSKSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLFSAA 184
              KSLT+QA FFF                          +W  P+ +CLVIK+GLFSAA
Sbjct: 123 LPVKSLTWQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLVIKQGLFSAA 182

Query: 185 GVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPIARE 244
           GVF L  VFLAAGLY+TA+RAQR+ ++Q +VRREVLE+  +++SPP+SP +  +  +ARE
Sbjct: 183 GVFALLAVFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQSPRLSIITTMARE 242

[Close]

BLAST of Carg23745 vs. TrEMBL
Match: tr|A0A2H5N6B5|A0A2H5N6B5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_018380 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 137/267 (51.31%), Postives = 185/267 (69.29%), Query Frame = 0


Query: 5   KAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWKGRDEN 64
           K  A+TH DL PS + +E GSK G  LI+ T+LCGLCCFILCL+AE+TRSQ+ W    E+
Sbjct: 3   KRTAITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTW----ES 62

Query: 65  NNKKGEK-RCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSF 124
            +KKGE+ +C YSGSGK PL+C A+AF+G+AV MV++H+Y+LIA+SKSPPPAL++WDP++
Sbjct: 63  THKKGEENQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNY 122

Query: 125 ATSKSLTFQAAFFF--------------------------DWWSPKESCLVIKEGLFSAA 184
              KSLT+QA FFF                          +W  P+ +CLVIK+GLFSAA
Sbjct: 123 LPVKSLTWQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLVIKQGLFSAA 182

Query: 185 GVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPVQPMPPIARE 244
           GVF L  VFLAAGLY+TA+RAQR+ ++Q +VRREVLE+  +++SPP+SP +  +  +ARE
Sbjct: 183 GVFALLAVFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQSPRLSIITTMARE 242

The following BLAST results are available for this feature:

BLAST of Carg23745 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934645.1	1.7e-132	90.48	uncharacterized protein LOC111441776 [Cucurbita moschata]	[more]
XP_023540160.1	3.9e-132	90.11	uncharacterized protein LOC111800614 [Cucurbita pepo subsp. pepo]	[more]
XP_022972325.1	9.5e-131	89.38	uncharacterized protein LOC111470898 [Cucurbita maxima] >XP_022975212.1 uncharac...	[more]
XP_004134498.1	6.0e-93	71.69	PREDICTED: uncharacterized protein LOC101213882 isoform X1 [Cucumis sativus]	[more]
KGN57149.1	3.0e-92	72.01	hypothetical protein Csa_3G165660 [Cucumis sativus]	[more]

BLAST of Carg23745 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49320.1	5.5e-56	48.56	Protein of unknown function (DUF1218)	[more]

BLAST of Carg23745 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg23745 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L805\|A0A0A0L805_CUCSA	2.0e-92	72.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165660 PE=4 SV=1	[more]
tr\|A0A1S3AY82\|A0A1S3AY82_CUCME	7.8e-81	64.60	uncharacterized protein LOC103483879 OS=Cucumis melo OX=3656 GN=LOC103483879 PE=...	[more]
tr\|A0A2N9EZ83\|A0A2N9EZ83_FAGSY	2.4e-66	55.51	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8037 PE=4 SV=1	[more]
tr\|V4U0C6\|V4U0C6_9ROSI	1.3e-64	51.31	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10007083mg PE=4 ...	[more]
tr\|A0A2H5N6B5\|A0A2H5N6B5_CITUN	1.3e-64	51.31	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_018380 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23745-RA	Carg23745-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 138..230 coord: 10..137
None	No IPR available	PANTHER	PTHR31769:SF2	SUBFAMILY NOT NAMED	coord: 138..230 coord: 10..137

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23745	Cla021775	Watermelon (97103) v1	carwmB0953
Carg23745	Csa3G165660	Cucumber (Chinese Long) v2	carcuB0967
Carg23745	MELO3C006698	Melon (DHL92) v3.5.1	carmeB0934
Carg23745	ClCG05G006400	Watermelon (Charleston Gray)	carwcgB0929
Carg23745	CSPI03G14820	Wild cucumber (PI 183967)	carcpiB0989
Carg23745	Cucsa.252710	Cucumber (Gy14) v1	carcgyB1072
Carg23745	CmaCh06G015520	Cucurbita maxima (Rimu)	carcmaB1307
Carg23745	CmaCh00G004240	Cucurbita maxima (Rimu)	carcmaB1303
Carg23745	CmoCh06G015510	Cucurbita moschata (Rifu)	carcmoB1276
Carg23745	CmoCh14G016320	Cucurbita moschata (Rifu)	carcmoB1273
Carg23745	Lsi05G015760	Bottle gourd (USVL1VR-Ls)	carlsiB869
Carg23745	Cp4.1LG03g11770	Cucurbita pepo (Zucchini)	carcpeB1320
Carg23745	Cp4.1LG08g05170	Cucurbita pepo (Zucchini)	carcpeB1321
Carg23745	CsGy3G014930	Cucumber (Gy14) v2	carcgybB0939
Carg23745	MELO3C006698.2	Melon (DHL92) v3.6.1	carmedB0940
Carg23745	CsaV3_3G015020	Cucumber (Chinese Long) v3	carcucB0995
Carg23745	Cla97C05G087990	Watermelon (97103) v2	carwmbB1003
Carg23745	Bhi01G000764	Wax gourd	carwgoB1105

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23745	Carg19636	Silver-seed gourd	carcarB318

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23745	Cucurbita maxima (Rimu)	carcmaB1304
Carg23745	Cucurbita maxima (Rimu)	carcmaB1305