Cucsa.120630.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCATGGCCAAATCCCTCTCCCTTCCATCTCTCCCCTTCATTTCCCCTTCTTCCATTACAACCCATCTCTCACACCTCCCCAAAATCTCTTGCTCTTCCATTTCTATTCAATCTCAATCAGCCAAACGCCAGCTTCTCACTCTCATTTCTGACCAACAAAGAGGTCTCAAGACCCAGAAAAATCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACCACTTGGCTTCTCTTGGCCGTAATTCTGTCACTACCGACGATTCACTTTCTGCGACATGGCGTCTTCTGTGGACTACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCGAGCTGGGGACGTTTTGCAGGTCATTGATGTTGAGAAAAAGAGTCTCAATAATGTTATCACTTTTCCTCCAGATGGGGTTTTCTTTGTTCGGTCAAACATTGAAGTTGCTTCCTCTCAGAGAGTGAACTTTAGGTATCTTGTCTCTGCCCCTGTCTCTTGTTTGGTTGAATTGCTGTTTGAGTTTAATGGGTGTCTCTTGAAATCAGAAAATTAGTAATTTTGTATATAATAATGATTCTAGAGGCTACTTAGTATGCAATCTCAGATATGTGGGAGAACTTAGCTCTAGTTTCAGAGGTCTCATAGAGGATTGATTAATTTTGAGTGTGGTGGATGGAATGAAATGGGTTTGTCATGGGGTTTAATTTTAAGCTCATGTTCAGATGGAGCTTTTGGACCAGTTTCTAATTCCAAACTCATTCATTTTCCGTAGTTTTCAACTCAACTCTCCTTTCCACCATTTTCATGCTTTCCTTAACCATATCTTATAAAACATAGAGACCTATTATTTGTCACTCTGCTTATTTTTGTTATCTATTAAATTCATGTGCAACTATTTATTCCAAAAAaCTCTTTAATTTATGGTTGAACTGCTCGATTAAGTTTACGTGCAACTATTGCAAAGCATCTAGATATTGAAATTCTACGTACTTTATGTTTATTATTGTTTTGTAGATAATGATGTTGAGTTTGAATCTCACTGTTTAGATTTACAAGTGCTGTTCTGCGAGGGAAAAACTGGGAGATTCCATTGCCACCATTTGGACAGGGTTGGTGAGTAATTATCTTTATGATTATGATCTCGTGGGTTGTATTATTTGTGTGCCTCAAATGCATGGTTTCATTTTACTATTTGCAGCTTTCAGTTTAAGACCAAAACATGCTTTAAACCAAATATTAAAATTTCGAGAACAACGTTATATTTCAAATTGACATTCAAAAGCTCCCTAAATCCATAGTGGCTACCTGGAGAGGCAATAAGACAATTAACTAATTAATTCTCAAATACTAGTTAATATAAATTAACAACCAAGCTACTATTAACTAAATTATACATATAATTTTGTAATTCTTCTCATCGACATATCTATAGTATAGTATGATATTGCCATACTTTGGACATAATATCTCTCATAACTTTGCTTTTGATTTCATTCAAGAAGAAGCCTCATATTTTGGGGATGGTTGTCCTAAATTCTAATTTATGTACTCGTAATGTTTCCCTTATCTAGCTAACATTAGACTTAAATCACAGTGTCAACAGGAATAGGATGAAAGAAGAAGAGGGAGCTAGGTGGGAATTTAACCCAATCATGGATATTGAGAATAATGTTGATTGATATAGGATTTAAGATGTATTGTTGAGCATAAGTCTACACGATCATCTGAAACAAGTTTGGTTCTTTGAGAGAAATCTCGATTTTAAAGTTATATTAGTTATGAGTAAGAAAGGCAATTGTTTAATAGTTATAGGCACGTGTAAGGATTTGATAGAATCCCAAACACAGGAGAAGTGGAGAAAATACCAATGGCCTATCAACAAACTTTCTAGATGCCTCTCTCTCTCTGAATCTCACAATAAACAATCCCACCCAAAATGATCCTCTCCCTCCAAAACCTTAATTCTATTTTTtACCAAGTCACTCCTAGCAAATTACCAGTTTCCACTATGCCCTTGCTAATTATATAACCAAGTCATGACATGGTGTAATTTATATAAATCCGAGTTTAAAATTAGATGATTCAAAGAAAGAACTCCTTTTAAGCATATGATCTACAGCAGCAATGGCCCTGTATCTAAGAAACGCATTCGCTGGAATAAATCCACACAAAATTTTTATAGACTGATACGTGCTTCACAACAAGCTAACATATTAAGCGTATGAGAAGAAATACGCACCAGACCCCTAAGTAATGACTGATAACTTCAAAGGTACTAACTTTCTCATAAGTTAAAAATAAGTTCTTGATTGAGATCCACCTACTATACCCTTCCATGAGATCCAAAGGAGTGTGTTTATCACTAGACCAATTCTCAATAAGAAAATGGAAATCACCATAGAGCTTCAGTTTTCTTTGGTATATCTAAAACTGTTGGGGAGTTACCATCTTCAAGTTTGAGTAAAGCATTATCTGCCATGTAAGGGTTAAGATAAACTGAGATCTTATAATGATCTTCCAAAGCATCTTTAATTTCTTTACAGTTATAAATTATGATCAAACATCACTACATTCTGGCCACATCCCTGCAAAATCAGAATCCGTATAGACGAACAATTTAAGTAATTTTGAAGCAAAAGGGGACCATACAGAGAAGATTTGTTTTTtACTCCATTTATCTATGTTCACATCTCCAGCAACTTGTGGTTTGGACATTGATTCCTATATCTAAACTCGAACAAGGACTATTTCTAGATCATAAAGATCCAACTTGGGCTGCAGTTTTGGAGACATTTTTGTAATTATCTTGTAGGTAGTATCTTACATAGTTAGAAAATCTTTCTTTAAAGGGGTTTCACACtAATTTTTTTTTTTTttTTTTTTtAtGTCTTTtAATTTTTttCTCAACTAAAGCAaCCTTTtCTaTTAAACTTGAAAGGCCTTGTCATGTTCTGCGTTTCTCGTGTTCTTTTTTtGAACTATTTTTTtAGTAATTCAATCATGAACATAAATTGTGGCATTTTCTTTtATTTTCTGTAGGTTTGACACAGTATACCTCGATGACGAGATTCGGGTTGTAAAAGATATCCGAGGTGATTATTTGATTGTTGAACGTGCTCCTTACAGTTGGACAGAATGAAGGCTGAATCACAAGTTTTCAATGGTGCTGTACAAACATGATGTAGTTGATTATAGTTGTGTTACTCATCTAATTTTTCTCCCAAGTAGATTTATCCTTATGGTATCTGTATTCATATCATGCAAGACATGCAACAACTTCTCTCACTCTGTATATATTTAATCTGACAAGTCTTTCCACTTATGATTTATTTATTTATATTTTTtATTTTCTGTTATCTACTTTTTGGAGTGTGTTATCAAAATTCAAACTAGAGTGTTTGAAAACTATACCTATGTAATTTTTGTTTGTTT CCCATGGCCAAATCCCTCTCCCTTCCATCTCTCCCCTTCATTTCCCCTTCTTCCATTACAACCCATCTCTCACACCTCCCCAAAATCTCTTGCTCTTCCATTTCTATTCAATCTCAATCAGCCAAACGCCAGCTTCTCACTCTCATTTCTGACCAACAAAGAGGTCTCAAGACCCAGAAAAATCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACCACTTGGCTTCTCTTGGCCGTAATTCTGTCACTACCGACGATTCACTTTCTGCGACATGGCGTCTTCTGTGGACTACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCGAGCTGGGGACGTTTTGCAGGTCATTGATGTTGAGAAAAAGAGTCTCAATAATGTTATCACTTTTCCTCCAGATGGGGTTTTCTTTGTTCGGTCAAACATTGAAGTTGCTTCCTCTCAGAGAGTGAACTTTAGATTTACAAGTGCTGTTCTGCGAGGGAAAAACTGGGAGATTCCATTGCCACCATTTGGACAGGGTTGGTTTGACACAGTATACCTCGATGACGAGATTCGGGTTGTAAAAGATATCCGAGGTGATTATTTGATTGTTGAACGTGCTCCTTACAGTTGGACAGAATGAAGGCTGAATCACAAGTTTTCAATGGTGCTGTACAAACATGATGTAGTTGATTATAGTTGTGTTACTCATCTAATTTTTCTCCCAAGTAGATTTATCCTTATGGTATCTGTATTCATATCATGCAAGACATGCAACAACTTCTCTCACTCTGTATATATTTAATCTGACAAGTCTTTCCACTTATGatttatttatttatattttttattttCTGTTATCTACTTTTTGGAGTGTGTTATCAAAATTCAAACTAGAGTGTTTGAAAACTATACCTATGTAATTTTTGTTTGTTT ATGGCCAAATCCCTCTCCCTTCCATCTCTCCCCTTCATTTCCCCTTCTTCCATTACAACCCATCTCTCACACCTCCCCAAAATCTCTTGCTCTTCCATTTCTATTCAATCTCAATCAGCCAAACGCCAGCTTCTCACTCTCATTTCTGACCAACAAAGAGGTCTCAAGACCCAGAAAAATCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACCACTTGGCTTCTCTTGGCCGTAATTCTGTCACTACCGACGATTCACTTTCTGCGACATGGCGTCTTCTGTGGACTACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCGAGCTGGGGACGTTTTGCAGGTCATTGATGTTGAGAAAAAGAGTCTCAATAATGTTATCACTTTTCCTCCAGATGGGGTTTTCTTTGTTCGGTCAAACATTGAAGTTGCTTCCTCTCAGAGAGTGAACTTTAGATTTACAAGTGCTGTTCTGCGAGGGAAAAACTGGGAGATTCCATTGCCACCATTTGGACAGGGTTGGTTTGACACAGTATACCTCGATGACGAGATTCGGGTTGTAAAAGATATCCGAGGTGATTATTTGATTGTTGAACGTGCTCCTTACAGTTGGACAGAATGA MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKRQLLTLISDQQRGLKTQKNPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE*
BLAST of Cucsa.120630.1 vs. Swiss-Prot
Match: PAP11_ARATH (Probable plastid-lipid-associated protein 11 OS=Arabidopsis thaliana GN=PAP11 PE=2 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 2.7e-77 Identity = 138/187 (73.80%), Postives = 163/187 (87.17%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. TrEMBL
Match: A0A0A0KDV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108600 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 9.5e-114 Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. TrEMBL
Match: W9QQ39_9ROSA (Putative plastid-lipid-associated protein 11 OS=Morus notabilis GN=L484_021783 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 4.0e-88 Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. TrEMBL
Match: A0A0D2PR91_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G175700 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.6e-84 Identity = 160/217 (73.73%), Postives = 184/217 (84.79%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. TrEMBL
Match: A0A067H1B9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027529mg PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.6e-84 Identity = 158/210 (75.24%), Postives = 180/210 (85.71%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. TrEMBL
Match: A0A061E254_THECC (Plastid-lipid associated protein PAP / fibrillin family protein isoform 1 OS=Theobroma cacao GN=TCM_005617 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 1.3e-83 Identity = 157/211 (74.41%), Postives = 183/211 (86.73%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. TAIR10
Match: AT4G00030.1 (AT4G00030.1 Plastid-lipid associated protein PAP / fibrillin family protein) HSP 1 Score: 289.7 bits (740), Expect = 1.5e-78 Identity = 138/187 (73.80%), Postives = 163/187 (87.17%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. NCBI nr
Match: gi|449445459|ref|XP_004140490.1| (PREDICTED: probable plastid-lipid-associated protein 11 [Cucumis sativus]) HSP 1 Score: 417.5 bits (1072), Expect = 1.4e-113 Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. NCBI nr
Match: gi|659116544|ref|XP_008458126.1| (PREDICTED: probable plastid-lipid-associated protein 11 [Cucumis melo]) HSP 1 Score: 414.8 bits (1065), Expect = 8.9e-113 Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. NCBI nr
Match: gi|703072316|ref|XP_010089253.1| (putative plastid-lipid-associated protein 11 [Morus notabilis]) HSP 1 Score: 332.4 bits (851), Expect = 5.8e-88 Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. NCBI nr
Match: gi|502167724|ref|XP_004514232.1| (PREDICTED: probable plastid-lipid-associated protein 11 isoform X1 [Cicer arietinum]) HSP 1 Score: 321.2 bits (822), Expect = 1.3e-84 Identity = 161/210 (76.67%), Postives = 180/210 (85.71%), Query Frame = 1
BLAST of Cucsa.120630.1 vs. NCBI nr
Match: gi|823125162|ref|XP_012483102.1| (PREDICTED: probable plastid-lipid-associated protein 11 [Gossypium raimondii]) HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84 Identity = 160/217 (73.73%), Postives = 184/217 (84.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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