Cucsa.078820.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AACCTCCGCCGACAGCTTCGAGGTATTTTGTTCACGTTGTAAATGGGCTAAGCTCCCACAGTTTGGATGTGCATTGCAAATCCAAGGACGATGATTTGGGATATCATCACATGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAACCCGGAAGCGTATGCCGATTTTGAAAGCTTTTGGCCTGAGTCCAGAAACCTTTGGCTTCGCTATAGATGCGGGAATCAATTAGGAACTTGTATTTGGACTGCCAAGGATGATGGAATTTATTTGAGAAACATGCCCGCTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAGTGA AACCTCCGCCGACAGCTTCGAGGTATTTTGTTCACGTTGTAAATGGGCTAAGCTCCCACAGTTTGGATGTGCATTGCAAATCCAAGGACGATGATTTGGGATATCATCACATGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAACCCGGAAGCGTATGCCGATTTTGAAAGCTTTTGGCCTGAGTCCAGAAACCTTTGGCTTCGCTATAGATGCGGGAATCAATTAGGAACTTGTATTTGGACTGCCAAGGATGATGGAATTTATTTGAGAAACATGCCCGCTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAGTGA AACCTCCGCCGACAGCTTCGAGGTATTTTGTTCACGTTGTAAATGGGCTAAGCTCCCACAGTTTGGATGTGCATTGCAAATCCAAGGACGATGATTTGGGATATCATCACATGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAACCCGGAAGCGTATGCCGATTTTGAAAGCTTTTGGCCTGAGTCCAGAAACCTTTGGCTTCGCTATAGATGCGGGAATCAATTAGGAACTTGTATTTGGACTGCCAAGGATGATGGAATTTATTTGAGAAACATGCCCGCTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAGTGA PPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWIPK*
BLAST of Cucsa.078820.1 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.3e-26 Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. TrEMBL
Match: M5VN50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.4e-24 Identity = 55/107 (51.40%), Postives = 71/107 (66.36%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. TrEMBL
Match: B9S578_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722290 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.5e-23 Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. TrEMBL
Match: B9S576_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722070 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 5.8e-23 Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. TrEMBL
Match: B9S577_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722080 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 7.6e-23 Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1) HSP 1 Score: 89.0 bits (219), Expect = 2.3e-18 Identity = 48/118 (40.68%), Postives = 67/118 (56.78%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 85.9 bits (211), Expect = 1.9e-17 Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. TAIR10
Match: AT1G28305.1 (AT1G28305.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12 Identity = 44/117 (37.61%), Postives = 60/117 (51.28%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. TAIR10
Match: AT5G06020.1 (AT5G06020.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 63.9 bits (154), Expect = 7.8e-11 Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. TAIR10
Match: AT5G04347.1 (AT5G04347.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 60.5 bits (145), Expect = 8.6e-10 Identity = 38/114 (33.33%), Postives = 58/114 (50.88%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus]) HSP 1 Score: 280.4 bits (716), Expect = 1.5e-72 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. NCBI nr
Match: gi|659124349|ref|XP_008462111.1| (PREDICTED: pumilio homolog 15-like [Cucumis melo]) HSP 1 Score: 248.1 bits (632), Expect = 8.2e-63 Identity = 107/122 (87.70%), Postives = 112/122 (91.80%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. NCBI nr
Match: gi|659124355|ref|XP_008462115.1| (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo]) HSP 1 Score: 235.0 bits (598), Expect = 7.2e-59 Identity = 101/122 (82.79%), Postives = 110/122 (90.16%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. NCBI nr
Match: gi|778730337|ref|XP_004139721.2| (PREDICTED: uncharacterized protein LOC101204770 [Cucumis sativus]) HSP 1 Score: 227.3 bits (578), Expect = 1.5e-56 Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 1
BLAST of Cucsa.078820.1 vs. NCBI nr
Match: gi|659124347|ref|XP_008462110.1| (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo]) HSP 1 Score: 224.2 bits (570), Expect = 1.3e-55 Identity = 99/122 (81.15%), Postives = 106/122 (86.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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