Cucsa.078820 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.078820
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRNA binding protein, putative
Locationscaffold00793 : 1300130 .. 1300500 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCTCCGCCGACAGCTTCGAGGTATTTTGTTCACGTTGTAAATGGGCTAAGCTCCCACAGTTTGGATGTGCATTGCAAATCCAAGGACGATGATTTGGGATATCATCACATGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAACCCGGAAGCGTATGCCGATTTTGAAAGCTTTTGGCCTGAGTCCAGAAACCTTTGGCTTCGCTATAGATGCGGGAATCAATTAGGAACTTGTATTTGGACTGCCAAGGATGATGGAATTTATTTGAGAAACATGCCCGCTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAGTGA

mRNA sequence

AACCTCCGCCGACAGCTTCGAGGTATTTTGTTCACGTTGTAAATGGGCTAAGCTCCCACAGTTTGGATGTGCATTGCAAATCCAAGGACGATGATTTGGGATATCATCACATGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAACCCGGAAGCGTATGCCGATTTTGAAAGCTTTTGGCCTGAGTCCAGAAACCTTTGGCTTCGCTATAGATGCGGGAATCAATTAGGAACTTGTATTTGGACTGCCAAGGATGATGGAATTTATTTGAGAAACATGCCCGCTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAGTGA

Coding sequence (CDS)

AACCTCCGCCGACAGCTTCGAGGTATTTTGTTCACGTTGTAAATGGGCTAAGCTCCCACAGTTTGGATGTGCATTGCAAATCCAAGGACGATGATTTGGGATATCATCACATGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAACCCGGAAGCGTATGCCGATTTTGAAAGCTTTTGGCCTGAGTCCAGAAACCTTTGGCTTCGCTATAGATGCGGGAATCAATTAGGAACTTGTATTTGGACTGCCAAGGATGATGGAATTTATTTGAGAAACATGCCCGCTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAGTGA

Protein sequence

PPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWIPK*
Homology
[Close]
BLAST of Cucsa.078820 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-26
Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 1 

Query: 6   SRYFVHVVNGLSS-HSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLEN 65
           +++ VHVVN L +  +L  HCKSKDDDLG  ++   G +F W+F+ENF+GTTL+WC +  
Sbjct: 17  NKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAP-GTEFNWSFKENFFGTTLYWCYMST 76

Query: 66  PEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKW 120
            + +A  + FW E  + WL+YRC  +   CIW AKDDGIY++ +P N DEF HKW
Sbjct: 77  DQKHAALDVFWVEGDHSWLQYRCNWK--DCIWIAKDDGIYIKIIPENRDEFSHKW 128

[Close]
BLAST of Cucsa.078820 vs. TrEMBL
Match: M5VN50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-24
Identity = 55/107 (51.40%), Postives = 71/107 (66.36%), Query Frame = 1 

Query: 17  SSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLENPEAYADFESFW- 76
           +S +L  HCKSKDDDLG   ++  G++F W F+ENF GTTLFWC + N   +A+F+ FW 
Sbjct: 3   ASKTLVAHCKSKDDDLGIRDVLP-GNEFNWGFKENFGGTTLFWCNIHNNHQHANFQVFWH 62

Query: 77  -PESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWIP 122
             ES++ WL YRC  +   C W AKDDGIY+RN P   DE  H+W P
Sbjct: 63  EDESKSSWLHYRCNWK--ECFWVAKDDGIYIRNTPEGRDELQHQWEP 106

[Close]
BLAST of Cucsa.078820 vs. TrEMBL
Match: B9S578_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722290 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-23
Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = 1 

Query: 7   RYFVHVVNGLSSHS-LDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLE-N 66
           ++ VHVVNGLS +  L +HCKS D+DLG H +   G +F W+F  NF  TTL+WC +  +
Sbjct: 32  KFHVHVVNGLSRNKILQIHCKSADNDLGAHSLAK-GREFSWSFRINFILTTLYWCHMAPD 91

Query: 67  PEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKW 120
             ++ D + FW      +L  RCG     CIWTAKDDG+YLRN+P N DEF HKW
Sbjct: 92  DHSHVDLKVFWDSQ---YLFERCGGAQ-QCIWTAKDDGVYLRNIPKNTDEFQHKW 141

[Close]
BLAST of Cucsa.078820 vs. TrEMBL
Match: B9S576_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722070 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-23
Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 1 

Query: 7   RYFVHVVNGLSSHS-LDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLE-N 66
           RY VHVVNGLS    L VHCKS D++LG ++ V +G +F W+F+ NF   TL+WCR+  +
Sbjct: 32  RYHVHVVNGLSPGKILFVHCKSADNNLGGYN-VGNGQEFSWSFKMNFLRRTLYWCRMAPD 91

Query: 67  PEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKW 120
            ++YAD + FW +     L   CG+    CIW AKDDG+YLRN+P N+DEF H W
Sbjct: 92  NQSYADLKVFWDDKH---LLDSCGDD-HQCIWIAKDDGVYLRNIPKNIDEFQHSW 141

[Close]
BLAST of Cucsa.078820 vs. TrEMBL
Match: B9S577_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722080 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.6e-23
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 1 

Query: 7   RYFVHVVNGLSSHS-LDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLE-N 66
           ++ VHVVNGLS    L VHCKS D+DLG  ++ N G +F W+F  NF+ TTL+WC +  +
Sbjct: 27  KFHVHVVNGLSPDKILFVHCKSADNDLGARNLSN-GQEFSWSFRMNFFMTTLYWCHMAPD 86

Query: 67  PEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKW 120
             +Y D + FW      +L  RCG+    CIW AKD+G+YLRN+P N+DEF H W
Sbjct: 87  DHSYVDMKVFWDSQ---YLSERCGHDQ-QCIWIAKDNGVYLRNIPMNIDEFQHNW 136

[Close]
BLAST of Cucsa.078820 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 89.0 bits (219), Expect = 2.3e-18
Identity = 48/118 (40.68%), Postives = 67/118 (56.78%), Query Frame = 1 

Query: 3   PTASRYFVHVVNGLSS-HSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCR 62
           P  S + V VVNGL++  +L +HCKSK+DDLG  ++    + F WNF EN   +T FWC 
Sbjct: 36  PKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINL-KFRNRFSWNFGENMLHSTFFWCY 95

Query: 63  LENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKW 120
           +     + +   FW +   + L +RCG +   CIWTAK DG+YL N  +  D    KW
Sbjct: 96  MNKDNGHMNVNVFWDD---VILFHRCGWK--NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]
BLAST of Cucsa.078820 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-17
Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 1 

Query: 3   PTASRYFVHVVNGLSS-HSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCR 62
           P  S + V V NGL++  +L +HCKSK++DLG  ++    D F WNF EN   +TLFWC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCY 95

Query: 63  LENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKW 120
           +   + + + + FW +   + L +RC  +   C+WTAK+DG+YL N     D    KW
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRCDWK--NCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]
BLAST of Cucsa.078820 vs. TAIR10
Match: AT1G28305.1 (AT1G28305.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12
Identity = 44/117 (37.61%), Postives = 60/117 (51.28%), Query Frame = 1 

Query: 10  VHVVNGLS---SHS-LDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLENP 69
           +H+ N L     HS L V CKS   D+G H+ V +G  +Q++  +NFW TTLFWC   + 
Sbjct: 26  LHIWNDLDPNQKHSDLFVQCKSGKADMGKHY-VKYGKIYQFDIRDNFWKTTLFWCTFRHG 85

Query: 70  EAYADFESFWPESRNLWLRYRCG-NQLGTCIWTAKDDGIYLRNMPANVDEFVHKWIP 122
             Y   + F          Y+ G  Q GT  WTA++DGIY R     + + VH W P
Sbjct: 86  PDYRTGQQFDV------YEYKPGVAQGGTYEWTAREDGIYFRLNQGTIHK-VHNWKP 134

[Close]
BLAST of Cucsa.078820 vs. TAIR10
Match: AT5G06020.1 (AT5G06020.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.9 bits (154), Expect = 7.8e-11
Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 1 

Query: 13  VNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLENPEAYADFE 72
           V   + + L +HCKSKDDDLG+ H+   G+ + W F  NF  +TL++C     +   D +
Sbjct: 51  VKNNNDYLLGIHCKSKDDDLGF-HIHKEGELYGWKFHVNFQNSTLYFCGFSQGQ---DNK 110

Query: 73  SFWPESRNLWLRYRCGNQLGTCIWTAKDDGIY-LRNMPANVDEFVHKWI 121
             +   R     YRC N    C W AK D +Y   N+P  V  F  KW+
Sbjct: 111 GVFDIDRAERDFYRCRN----CTWNAKKDSLYGYSNLPQTVTWF-FKWL 150

[Close]
BLAST of Cucsa.078820 vs. TAIR10
Match: AT5G04347.1 (AT5G04347.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 60.5 bits (145), Expect = 8.6e-10
Identity = 38/114 (33.33%), Postives = 58/114 (50.88%), Query Frame = 1 

Query: 12  VVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRL-ENPE---- 71
           V N L++  L V C+SKDD+LG  H++  G   + NF++N W  TLFWC L + P+    
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLG-DHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLH 85

Query: 72  -AYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKW 120
            A+  + S W    ++  RY         +W A++DGIY    P    +  + W
Sbjct: 86  VAFDAYRSQW--KADIGPRY---------LWIAREDGIYYTQHPETPPKKKYDW 127

[Close]
BLAST of Cucsa.078820 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 1.5e-72
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1 

Query: 1   PPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWC 60
           PPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWC
Sbjct: 14  PPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWC 73

Query: 61  RLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWI 120
           RLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWI
Sbjct: 74  RLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWI 133

Query: 121 PK 123
           PK
Sbjct: 134 PK 135

[Close]
BLAST of Cucsa.078820 vs. NCBI nr
Match: gi|659124349|ref|XP_008462111.1| (PREDICTED: pumilio homolog 15-like [Cucumis melo])

HSP 1 Score: 248.1 bits (632), Expect = 8.2e-63
Identity = 107/122 (87.70%), Postives = 112/122 (91.80%), Query Frame = 1 

Query: 1   PPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWC 60
           PPP ASRYFVHVVNGLS H+LDVHC+SKDDDLGYH +VNHGDDFQWNF ENFWGTTLFWC
Sbjct: 14  PPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWNFRENFWGTTLFWC 73

Query: 61  RLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWI 120
           RLE  +AY  FESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN+  NVDEFVHKWI
Sbjct: 74  RLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNLSTNVDEFVHKWI 133

Query: 121 PK 123
           PK
Sbjct: 134 PK 135

[Close]
BLAST of Cucsa.078820 vs. NCBI nr
Match: gi|659124355|ref|XP_008462115.1| (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 7.2e-59
Identity = 101/122 (82.79%), Postives = 110/122 (90.16%), Query Frame = 1 

Query: 1   PPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWC 60
           PPP  SRYFVHVVNGLS  SLDVHC+SK+DDLGYHH+VN GD++QWNFEEN WGTTLFWC
Sbjct: 14  PPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWC 73

Query: 61  RLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWI 120
           RLE P+AY  FESFWPE++N+WLR RCGNQ GTCIWTAKDDGIYLRNMP NVDEFVHKWI
Sbjct: 74  RLEKPDAYVAFESFWPETKNVWLRDRCGNQ-GTCIWTAKDDGIYLRNMPTNVDEFVHKWI 133

Query: 121 PK 123
           PK
Sbjct: 134 PK 134

[Close]
BLAST of Cucsa.078820 vs. NCBI nr
Match: gi|778730337|ref|XP_004139721.2| (PREDICTED: uncharacterized protein LOC101204770 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-56
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 1 

Query: 1   PPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWC 60
           P   ASRYFVHVVNGLS  SLDVHC+SKD+DLGYHH+VNHGD+FQWNFEENFWGTTLFWC
Sbjct: 12  PLQQASRYFVHVVNGLSYQSLDVHCQSKDNDLGYHHLVNHGDEFQWNFEENFWGTTLFWC 71

Query: 61  RLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWI 120
           RLE  +AY  FESFWPES+N+WLR RCGNQLGTCIW AKDDGIYL+NM  N DEFVHKWI
Sbjct: 72  RLEKWDAYVAFESFWPESKNIWLRDRCGNQLGTCIWIAKDDGIYLKNMLTNFDEFVHKWI 131

Query: 121 PK 123
            K
Sbjct: 132 HK 133

[Close]
BLAST of Cucsa.078820 vs. NCBI nr
Match: gi|659124347|ref|XP_008462110.1| (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo])

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-55
Identity = 99/122 (81.15%), Postives = 106/122 (86.89%), Query Frame = 1 

Query: 1   PPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWC 60
           PPP  SRYFV+VVNGLS HSLDVHC+SKDDDLGYHH+VNHGD FQWNFEENF+GTTLFWC
Sbjct: 25  PPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHHLVNHGDYFQWNFEENFFGTTLFWC 84

Query: 61  RLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDEFVHKWI 120
           RLE  +AY  FESFWPES N WLR RCGNQ GTC+W AKDDGIYLRN+P NVDE VHKWI
Sbjct: 85  RLEKSDAYVAFESFWPESTNRWLRDRCGNQ-GTCVWIAKDDGIYLRNIPVNVDELVHKWI 144

Query: 121 PK 123
            K
Sbjct: 145 SK 145

The following BLAST results are available for this feature:
BLAST of Cucsa.078820 vs. TrEMBL
Match NameE-valueIdentityDescription
M5VWE5_PRUPE3.3e-2649.57Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S... [more]
M5VN50_PRUPE1.4e-2451.40Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1[more]
B9S578_RICCO4.5e-2349.57Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722290 PE=4 SV=1[more]
B9S576_RICCO5.8e-2350.43Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722070 PE=4 SV=1[more]
B9S577_RICCO7.6e-2348.70Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1722080 PE=4 SV=1[more]
BLAST of Cucsa.078820 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16295.12.3e-1840.68 S-protein homologue 1[more]
AT4G29035.11.9e-1738.98 Plant self-incompatibility protein S1 family[more]
AT1G28305.17.0e-1237.61 Plant self-incompatibility protein S1 family[more]
AT5G06020.17.8e-1135.78 Plant self-incompatibility protein S1 family[more]
AT5G04347.18.6e-1033.33 Plant self-incompatibility protein S1 family[more]
BLAST of Cucsa.078820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443935|ref|XP_004139731.1|1.5e-72100.00PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus][more]
gi|659124349|ref|XP_008462111.1|8.2e-6387.70PREDICTED: pumilio homolog 15-like [Cucumis melo][more]
gi|659124355|ref|XP_008462115.1|7.2e-5982.79PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo][more]
gi|778730337|ref|XP_004139721.2|1.5e-5681.15PREDICTED: uncharacterized protein LOC101204770 [Cucumis sativus][more]
gi|659124347|ref|XP_008462110.1|1.3e-5581.15PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.078820.1Cucsa.078820.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 10..119
score: 7.1
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 6..119
score: 2.6
NoneNo IPR availablePANTHERPTHR31232:SF7S PROTEIN HOMOLOGUE 74-RELATEDcoord: 6..119
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.078820MELO3C024133Melon (DHL92) v3.5.1cgymeB081
Cucsa.078820CSPI07G13550Wild cucumber (PI 183967)cgycpiB079
Cucsa.078820MELO3C028616.2Melon (DHL92) v3.6.1cgymedB080
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.078820Wax gourdcgywgoB092
Cucsa.078820Cucurbita maxima (Rimu)cgycmaB0136
Cucsa.078820Cucurbita maxima (Rimu)cgycmaB0143
Cucsa.078820Cucurbita moschata (Rifu)cgycmoB0138
Cucsa.078820Cucurbita moschata (Rifu)cgycmoB0133
Cucsa.078820Cucumber (Chinese Long) v2cgycuB076
Cucsa.078820Watermelon (Charleston Gray)cgywcgB081
Cucsa.078820Watermelon (97103) v1cgywmB083
Cucsa.078820Cucurbita pepo (Zucchini)cgycpeB0131
Cucsa.078820Cucurbita pepo (Zucchini)cgycpeB0133
Cucsa.078820Bottle gourd (USVL1VR-Ls)cgylsiB081
Cucsa.078820Silver-seed gourdcarcgyB0092
Cucsa.078820Cucumber (Chinese Long) v3cgycucB080
Cucsa.078820Watermelon (97103) v2cgywmbB078