CSPI07G13550 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G13550
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRNA binding protein, putative
LocationChr7 : 12032234 .. 12032641 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTGGTTGAGAGTCAAGTTCCGAACTGGTCAGAACCTCCGCCGACAGCTTCGAGGTATTTTGTTCACGTTGTAAATGGGCTAAGCTCCCACAGTTTGGATGTGCATTGCCAATCCAAGGACGATGATTTGGGATATCATCACATGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAACCCGGAAGCGTATGCCGATTTTGAAAGCTTTTGGCCTGAGTCCAGGAACCTTTGGCTTCGCTATAGATGTGGGAATCAATTAGGAACTTGTATTTGGACTGCCAAGGACGATGGAATTTATTTGAGAAACATGCCCGCTAATGTTGATGAACTTGTTCACAAATGGATCCCTAAGTGA

mRNA sequence

ATGGTTTTGGTTGAGAGTCAAGTTCCGAACTGGTCAGAACCTCCGCCGACAGCTTCGAGGTATTTTGTTCACGTTGTAAATGGGCTAAGCTCCCACAGTTTGGATGTGCATTGCCAATCCAAGGACGATGATTTGGGATATCATCACATGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAACCCGGAAGCGTATGCCGATTTTGAAAGCTTTTGGCCTGAGTCCAGGAACCTTTGGCTTCGCTATAGATGTGGGAATCAATTAGGAACTTGTATTTGGACTGCCAAGGACGATGGAATTTATTTGAGAAACATGCCCGCTAATGTTGATGAACTTGTTCACAAATGGATCCCTAAGTGA

Coding sequence (CDS)

ATGGTTTTGGTTGAGAGTCAAGTTCCGAACTGGTCAGAACCTCCGCCGACAGCTTCGAGGTATTTTGTTCACGTTGTAAATGGGCTAAGCTCCCACAGTTTGGATGTGCATTGCCAATCCAAGGACGATGATTTGGGATATCATCACATGGTTAACCATGGAGATGATTTCCAATGGAACTTTGAAGAAAACTTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAGAACCCGGAAGCGTATGCCGATTTTGAAAGCTTTTGGCCTGAGTCCAGGAACCTTTGGCTTCGCTATAGATGTGGGAATCAATTAGGAACTTGTATTTGGACTGCCAAGGACGATGGAATTTATTTGAGAAACATGCCCGCTAATGTTGATGAACTTGTTCACAAATGGATCCCTAAGTGA
Homology
[Close]
BLAST of CSPI07G13550 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-26
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 1 

Query: 9   PNWSEPPPTASRYFVHVVNGLSS-HSLDVHCQSKDDDLGYHHMVNHGDDFQWNFEENFWG 68
           P    P    +++ VHVVN L +  +L  HC+SKDDDLG  ++   G +F W+F+ENF+G
Sbjct: 7   PCLGSPGIRYNKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAP-GTEFNWSFKENFFG 66

Query: 69  TTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDE 128
           TTL+WC +   + +A  + FW E  + WL+YRC  +   CIW AKDDGIY++ +P N DE
Sbjct: 67  TTLYWCYMSTDQKHAALDVFWVEGDHSWLQYRCNWK--DCIWIAKDDGIYIKIIPENRDE 126

Query: 129 LVHKW 133
             HKW
Sbjct: 127 FSHKW 128

[Close]
BLAST of CSPI07G13550 vs. TrEMBL
Match: M5VN50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-25
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1 

Query: 30  SSHSLDVHCQSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLENPEAYADFESFW- 89
           +S +L  HC+SKDDDLG   ++  G++F W F+ENF GTTLFWC + N   +A+F+ FW 
Sbjct: 3   ASKTLVAHCKSKDDDLGIRDVLP-GNEFNWGFKENFGGTTLFWCNIHNNHQHANFQVFWH 62

Query: 90  -PESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDELVHKWIP 135
             ES++ WL YRC  +   C W AKDDGIY+RN P   DEL H+W P
Sbjct: 63  EDESKSSWLHYRCNWK--ECFWVAKDDGIYIRNTPEGRDELQHQWEP 106

[Close]
BLAST of CSPI07G13550 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.6e-24
Identity = 59/121 (48.76%), Postives = 81/121 (66.94%), Query Frame = 1 

Query: 14  PPPTASRYFVHVVNGLSSH-SLDVHCQSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFW 73
           P PT + + VHVVN LS++ +L +HC+SKDDDLG H +   G +  W F+ENF+ TTLFW
Sbjct: 25  PIPTKT-WHVHVVNNLSNNQTLFLHCKSKDDDLGEHKLTT-GTESNWKFKENFFQTTLFW 84

Query: 74  CRLENPEAYA-DFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDELVHK 133
           C L  P+ +  +F+ FW E    + ++RC  +   CIWTAKD+GIYL+N+P   DEL  K
Sbjct: 85  CHLRKPDNFCNNFKVFWNED---FFQFRC--RYKDCIWTAKDEGIYLKNIPEGRDELWQK 138

[Close]
BLAST of CSPI07G13550 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.2e-23
Identity = 53/116 (45.69%), Postives = 72/116 (62.07%), Query Frame = 1 

Query: 19  SRYFVHVVNGLSS-HSLDVHCQSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLEN 78
           S + +H+ NGLS   +L VHC+SKD DLG    ++ G +F+WNF+ N W TTLFWC L  
Sbjct: 28  SPWEIHIKNGLSDGQALFVHCKSKDSDLG-ERTLSTGAEFKWNFKVNIWDTTLFWCYLRK 87

Query: 79  PEA-YADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDELVHKW 133
           P+     FE+FW E +  WLR +C   +  C W A+D GIYL++   N DE +H W
Sbjct: 88  PKGDQVRFEAFWVEKKTRWLRVKCDGNI--CNWIAEDTGIYLKDNSTNEDERIHYW 140

[Close]
BLAST of CSPI07G13550 vs. TrEMBL
Match: A0A061DVJ1_THECC (S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.9e-23
Identity = 58/142 (40.85%), Postives = 81/142 (57.04%), Query Frame = 1 

Query: 1   MVLVESQVPNWSEPPPTASRYF-------VHVVNGLSSHS-LDVHCQSKDDDLGYHHMVN 60
           ++ + S  P+ SEP    +  F       +H VNG+S    L +HC+S D+DLG H++  
Sbjct: 16  IIAISSSTPSPSEPGKGHTDSFEMYKTWHIHAVNGMSHEKILFLHCKSGDNDLGIHNLTA 75

Query: 61  HGDDFQWNFEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAK 120
            G +F W F+    G TLFWC +     +A F+ FW ++    L YRC  +   CIWTAK
Sbjct: 76  -GTEFNWKFKPQILGKTLFWCYMAWGNVHASFKVFWDDND---LFYRCNWK--NCIWTAK 135

Query: 121 DDGIYLRNMPANVDELVHKWIP 135
           DDG+YL+N+P N DE  HKW P
Sbjct: 136 DDGVYLKNIPENYDEFRHKWEP 151

[Close]
BLAST of CSPI07G13550 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-19
Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 1 

Query: 16  PTASRYFVHVVNGLSS-HSLDVHCQSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCR 75
           P  S + V VVNGL++  +L +HC+SK+DDLG  ++    + F WNF EN   +T FWC 
Sbjct: 36  PKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINL-KFRNRFSWNFGENMLHSTFFWCY 95

Query: 76  LENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDELVHKW 133
           +     + +   FW +   + L +RCG +   CIWTAK DG+YL N  +  D L  KW
Sbjct: 96  MNKDNGHMNVNVFWDD---VILFHRCGWK--NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]
BLAST of CSPI07G13550 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18
Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1 

Query: 16  PTASRYFVHVVNGLSS-HSLDVHCQSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCR 75
           P  S + V V NGL++  +L +HC+SK++DLG  ++    D F WNF EN   +TLFWC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDINL-KFLDRFSWNFGENMLHSTLFWCY 95

Query: 76  LENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDELVHKW 133
           +   + + + + FW +   + L +RC  +   C+WTAK+DG+YL N     D L  KW
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRCDWK--NCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]
BLAST of CSPI07G13550 vs. TAIR10
Match: AT1G28305.1 (AT1G28305.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-12
Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = 1 

Query: 23  VHVVNGLS---SHS-LDVHCQSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRLENP 82
           +H+ N L     HS L V C+S   D+G H+ V +G  +Q++  +NFW TTLFWC   + 
Sbjct: 26  LHIWNDLDPNQKHSDLFVQCKSGKADMGKHY-VKYGKIYQFDIRDNFWKTTLFWCTFRHG 85

Query: 83  EAYADFESFWPESRNLWLRYRCG-NQLGTCIWTAKDDGIYLRNMPANVDELVHKWIP 135
             Y   + F          Y+ G  Q GT  WTA++DGIY R     + + VH W P
Sbjct: 86  PDYRTGQQFDV------YEYKPGVAQGGTYEWTAREDGIYFRLNQGTIHK-VHNWKP 134

[Close]
BLAST of CSPI07G13550 vs. TAIR10
Match: AT5G06020.1 (AT5G06020.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-11
Identity = 40/122 (32.79%), Postives = 57/122 (46.72%), Query Frame = 1 

Query: 13  EPPPTASRYFVHVVNGLSSHSLDVHCQSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFW 72
           EP P         V   + + L +HC+SKDDDLG+ H+   G+ + W F  NF  +TL++
Sbjct: 38  EPFPIRGPLTRITVKNNNDYLLGIHCKSKDDDLGF-HIHKEGELYGWKFHVNFQNSTLYF 97

Query: 73  CRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIY-LRNMPANVDELVHK 132
           C     +   D +  +   R     YRC N    C W AK D +Y   N+P  V     K
Sbjct: 98  CGFSQGQ---DNKGVFDIDRAERDFYRCRN----CTWNAKKDSLYGYSNLPQTV-TWFFK 150

Query: 133 WI 134
           W+
Sbjct: 158 WL 150

[Close]
BLAST of CSPI07G13550 vs. TAIR10
Match: AT5G04347.1 (AT5G04347.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.9 bits (154), Expect = 8.6e-11
Identity = 38/114 (33.33%), Postives = 58/114 (50.88%), Query Frame = 1 

Query: 25  VVNGLSSHSLDVHCQSKDDDLGYHHMVNHGDDFQWNFEENFWGTTLFWCRL-ENPE---- 84
           V N L++  L V C+SKDD+LG  H++  G   + NF++N W  TLFWC L + P+    
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLG-DHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLH 85

Query: 85  -AYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNMPANVDELVHKW 133
            A+  + S W    ++  RY         +W A++DGIY    P    +  + W
Sbjct: 86  VAFDAYRSQW--KADIGPRY---------LWIAREDGIYYTQHPETPPKKKYDW 127

[Close]
BLAST of CSPI07G13550 vs. NCBI nr
Match: gi|449443935|ref|XP_004139731.1| (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 7.4e-81
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 1 

Query: 1   MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCQSKDDDLGYHHMVNHGDDFQWN 60
           MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHC+SKDDDLGYHHMVNHGDDFQWN
Sbjct: 1   MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWN 60

Query: 61  FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120
           FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN
Sbjct: 61  FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120

Query: 121 MPANVDELVHKWIPK 136
           MPANVDE VHKWIPK
Sbjct: 121 MPANVDEFVHKWIPK 135

[Close]
BLAST of CSPI07G13550 vs. NCBI nr
Match: gi|659124349|ref|XP_008462111.1| (PREDICTED: pumilio homolog 15-like [Cucumis melo])

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-71
Identity = 119/135 (88.15%), Postives = 123/135 (91.11%), Query Frame = 1 

Query: 1   MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCQSKDDDLGYHHMVNHGDDFQWN 60
           MVLVE QVPNWSEPPP ASRYFVHVVNGLS H+LDVHCQSKDDDLGYH +VNHGDDFQWN
Sbjct: 1   MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN 60

Query: 61  FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120
           F ENFWGTTLFWCRLE  +AY  FESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN
Sbjct: 61  FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120

Query: 121 MPANVDELVHKWIPK 136
           +  NVDE VHKWIPK
Sbjct: 121 LSTNVDEFVHKWIPK 135

[Close]
BLAST of CSPI07G13550 vs. NCBI nr
Match: gi|659124355|ref|XP_008462115.1| (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 1.7e-64
Identity = 108/135 (80.00%), Postives = 118/135 (87.41%), Query Frame = 1 

Query: 1   MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCQSKDDDLGYHHMVNHGDDFQWN 60
           MVLVE +V  W +PPP  SRYFVHVVNGLS  SLDVHCQSK+DDLGYHH+VN GD++QWN
Sbjct: 1   MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWN 60

Query: 61  FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120
           FEEN WGTTLFWCRLE P+AY  FESFWPE++N+WLR RCGNQ GTCIWTAKDDGIYLRN
Sbjct: 61  FEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQ-GTCIWTAKDDGIYLRN 120

Query: 121 MPANVDELVHKWIPK 136
           MP NVDE VHKWIPK
Sbjct: 121 MPTNVDEFVHKWIPK 134

[Close]
BLAST of CSPI07G13550 vs. NCBI nr
Match: gi|659124347|ref|XP_008462110.1| (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 4.5e-62
Identity = 107/134 (79.85%), Postives = 115/134 (85.82%), Query Frame = 1 

Query: 2   VLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCQSKDDDLGYHHMVNHGDDFQWNF 61
           V+VE QV  W +PPP  SRYFV+VVNGLS HSLDVHCQSKDDDLGYHH+VNHGD FQWNF
Sbjct: 13  VVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHHLVNHGDYFQWNF 72

Query: 62  EENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRNM 121
           EENF+GTTLFWCRLE  +AY  FESFWPES N WLR RCGNQ GTC+W AKDDGIYLRN+
Sbjct: 73  EENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRCGNQ-GTCVWIAKDDGIYLRNI 132

Query: 122 PANVDELVHKWIPK 136
           P NVDELVHKWI K
Sbjct: 133 PVNVDELVHKWISK 145

[Close]
BLAST of CSPI07G13550 vs. NCBI nr
Match: gi|778730337|ref|XP_004139721.2| (PREDICTED: uncharacterized protein LOC101204770 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 9.4e-60
Identity = 105/135 (77.78%), Postives = 114/135 (84.44%), Query Frame = 1 

Query: 1   MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCQSKDDDLGYHHMVNHGDDFQWN 60
           MVLVE   P  ++P   ASRYFVHVVNGLS  SLDVHCQSKD+DLGYHH+VNHGD+FQWN
Sbjct: 1   MVLVEG--PRLAKPLQQASRYFVHVVNGLSYQSLDVHCQSKDNDLGYHHLVNHGDEFQWN 60

Query: 61  FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120
           FEENFWGTTLFWCRLE  +AY  FESFWPES+N+WLR RCGNQLGTCIW AKDDGIYL+N
Sbjct: 61  FEENFWGTTLFWCRLEKWDAYVAFESFWPESKNIWLRDRCGNQLGTCIWIAKDDGIYLKN 120

Query: 121 MPANVDELVHKWIPK 136
           M  N DE VHKWI K
Sbjct: 121 MLTNFDEFVHKWIHK 133

The following BLAST results are available for this feature:
BLAST of CSPI07G13550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G13550 vs. TrEMBL
Match NameE-valueIdentityDescription
M5VWE5_PRUPE1.6e-2645.60Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S... [more]
M5VN50_PRUPE1.1e-2551.40Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1[more]
V4VUI1_9ROSI7.6e-2448.76Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1[more]
A0A0A0K6N8_CUCSA2.2e-2345.69Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1[more]
A0A061DVJ1_THECC2.9e-2340.85S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1[more]
BLAST of CSPI07G13550 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16295.11.7e-1940.68 S-protein homologue 1[more]
AT4G29035.11.5e-1838.98 Plant self-incompatibility protein S1 family[more]
AT1G28305.11.6e-1236.75 Plant self-incompatibility protein S1 family[more]
AT5G06020.13.9e-1132.79 Plant self-incompatibility protein S1 family[more]
AT5G04347.18.6e-1133.33 Plant self-incompatibility protein S1 family[more]
BLAST of CSPI07G13550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443935|ref|XP_004139731.1|7.4e-8198.52PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus][more]
gi|659124349|ref|XP_008462111.1|1.4e-7188.15PREDICTED: pumilio homolog 15-like [Cucumis melo][more]
gi|659124355|ref|XP_008462115.1|1.7e-6480.00PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo][more]
gi|659124347|ref|XP_008462110.1|4.5e-6279.85PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo][more]
gi|778730337|ref|XP_004139721.2|9.4e-6077.78PREDICTED: uncharacterized protein LOC101204770 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G13550.1CSPI07G13550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 23..132
score: 1.0
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 19..132
score: 3.4
NoneNo IPR availablePANTHERPTHR31232:SF7S PROTEIN HOMOLOGUE 74-RELATEDcoord: 19..132
score: 3.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G13550MELO3C024133Melon (DHL92) v3.5.1cpimeB544
CSPI07G13550MELO3C028616.2Melon (DHL92) v3.6.1cpimedB529
CSPI07G13550Cucsa.078820Cucumber (Gy14) v1cgycpiB079
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G13550Cucurbita maxima (Rimu)cmacpiB945
CSPI07G13550Cucurbita moschata (Rifu)cmocpiB382
CSPI07G13550Cucurbita moschata (Rifu)cmocpiB923
CSPI07G13550Cucumber (Chinese Long) v2cpicuB354
CSPI07G13550Watermelon (Charleston Gray)cpiwcgB554
CSPI07G13550Watermelon (97103) v1cpiwmB586
CSPI07G13550Cucurbita pepo (Zucchini)cpecpiB164
CSPI07G13550Cucurbita pepo (Zucchini)cpecpiB347
CSPI07G13550Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G13550Cucumber (Gy14) v2cgybcpiB331
CSPI07G13550Silver-seed gourdcarcpiB0101
CSPI07G13550Cucumber (Chinese Long) v3cpicucB414
CSPI07G13550Watermelon (97103) v2cpiwmbB597
CSPI07G13550Wax gourdcpiwgoB719
CSPI07G13550Cucurbita maxima (Rimu)cmacpiB393