Cucsa.031190.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CATTGGGAGTTGGTAGAACCTGGATATGTTGAACCAGCTAGCGAGTCATTGCAGACAAATGCTCAACAGAAGAAAAATGATGAAATGAAGCTGAAGGACTTGAAAGTGAAAATTTATCTTTTCCAAGCCATTGATCGCACAATTCTGAAGACCATTCTCAAGAAAAATACTGCAAAAGAAATATGGGATGCTATGAAGAAAAAGTATGAAGGAAATGCAAGAGTCAGGCGGTCTTATCTTCAAGCTCTTTGTAGAGAATTTGAAATTCTTGAGATGAAGTCTGGTGAAGGGGTGACAGAGTACTTCTCCAGAGTCATGATTGTGGCAAATAAGATGCGAACTTATGGTGAAGATATGCAAGATGTAAAAGTAGTTGAAAAAATCCTACGCTCCTTGACTGACAACTTTAATTATATTGTTTCTTCTATTGAAGAGTCAAAAGATCCCAACACTCTCACTATTGATGAATTACAAAGTTCTTTAATAGTACATGAACAAAAGTTTCAACGACGAGGTGGGGAGGAGCAAGCCTTGAAAGTGACAAATGATGAAGGAAGAGGTCGTGGTAGTGGCAGCTATAGAGGAAGAGGTCGGGGAACTTTCAACAAAGCCAATGTGCAGTGTTTTCGATGCCAAAAATTTGGATATTTTCAATATGAATGTTCTGAAAACAAAGAAGCAAACTATGCTGAATTTGATGAGGAAGAAGAAATGTTTTTGATGTCTTATGAGGAAAAACATGGAGTTCAAAGAGAAGATACATGGATTCTTGATTTTGGGTGTTCAAATCATATGTGTGGTGATCGATCAATGTTTAGTGATCTCAATGAAGATTTTCGACATTCAGTGAAATTGGGAAACAACACTAGAATGAATGTCATGGGCAAAGGAAATGTAAAGTTGCTCATAAATGGAGTTAATCACGTTGTTGCTGAGGTATATTACATTCCAGATTTAAGTAGCAACCTATTGAGCATAGGACAATTGCAAGAAAAAGGAATGTCGATTTTGATCAAGCGAGGAGAGTGCAAAATATTTCATCCAAAGATGGATTTGATTATTCAGATCAAGATGAGCAACAGTAGGATGTTTACTTTGCAAGCTCAAACTCAAATATCTTGGGGAATTGACAAAAATAGGCCAAAAATGGGGCAGATAAAGACTTTTAGGATTGATTGTAAAAAGGTTGACATTTAG CATTGGGAGTTGGTAGAACCTGGATATGTTGAACCAGCTAGCGAGTCATTGCAGACAAATGCTCAACAGAAGAAAAATGATGAAATGAAGCTGAAGGACTTGAAAGTGAAAATTTATCTTTTCcaagccattgatcgcacaattctgaagaccattctcaagaaaaatactgcaaaagaaatatgggatgctatgaagaaaaagtatgaaggaaatgcaagagtcaggcggtcttatcttcaagctctttgtagagaatttgaaattcttgagatgaagtctggtgaaggggtgacagagtacttctccagagtcatgattgtggcaaataagatgcgaacttatggtgaagatatgcaagatgtaaaagtagttgaaaaaatcctacgctccttgactgacaactttaattatattgtttcttctattgaagagtcaaaagatcccaacactctcactattgatgaattacaaagttctttaatagtacatgaacaaaagtttcAACGACGAGGTGGGGAGGAGCAAGCCTTGAAAGTGACAAATGATGAAGGAAGAGGTCGTGGTAGTGGCAGCTATAGAGGAAGAGGTCGGGGAACTTTCAACAAAGCCAATGTGCATGATCTCAATGAAGATTTTCGACATTCAGTGAAATTGGGAAACAACACTAGAATGAATGTCATGGGCAAAGGAAATGTAAAGTTGCTCATAAATGGAGTTAATCACGTTGTTGCTGAGGTATATTACATTCCAGATTTAAGTAGCAACCTATTGAGCATAGGACAATTGCAAGAAAAAGGAATGTCGATTTTGATCAAGCGAGGAGAGTGCAAAATATTTCATCCAAAGATGGATTTGATTATTCAGATCAAGATGAGCAACAGTAGGATGTTTACTTTGCAAGCTCAAACTCAAATATCTTggggaattgacaaaaataggccaaaaatggggcagataaagacttttaggattgattgtaaaaaggttgacatttag CATTGGGAGTTGGTAGAACCTGGATATGTTGAACCAGCTAGCGAGTCATTGCAGACAAATGCTCAACAGAAGAAAAATGATGAAATGAAGCTGAAGGACTTGAAAGTGAAAATTTATCTTTTCCAAGCCATTGATCGCACAATTCTGAAGACCATTCTCAAGAAAAATACTGCAAAAGAAATATGGGATGCTATGAAGAAAAAGTATGAAGGAAATGCAAGAGTCAGGCGGTCTTATCTTCAAGCTCTTTGTAGAGAATTTGAAATTCTTGAGATGAAGTCTGGTGAAGGGGTGACAGAGTACTTCTCCAGAGTCATGATTGTGGCAAATAAGATGCGAACTTATGGTGAAGATATGCAAGATGTAAAAGTAGTTGAAAAAATCCTACGCTCCTTGACTGACAACTTTAATTATATTGTTTCTTCTATTGAAGAGTCAAAAGATCCCAACACTCTCACTATTGATGAATTACAAAGTTCTTTAATAGTACATGAACAAAAGTTTCAACGACGAGGTGGGGAGGAGCAAGCCTTGAAAGTGACAAATGATGAAGGAAGAGGTCGTGGTAGTGGCAGCTATAGAGGAAGAGGTCGGGGAACTTTCAACAAAGCCAATGTGCATGATCTCAATGAAGATTTTCGACATTCAGTGAAATTGGGAAACAACACTAGAATGAATGTCATGGGCAAAGGAAATGTAAAGTTGCTCATAAATGGAGTTAATCACGTTGTTGCTGAGGTATATTACATTCCAGATTTAAGTAGCAACCTATTGAGCATAGGACAATTGCAAGAAAAAGGAATGTCGATTTTGATCAAGCGAGGAGAGTGCAAAATATTTCATCCAAAGATGGATTTGATTATTCAGATCAAGATGAGCAACAGTAGGATGTTTACTTTGCAAGCTCAAACTCAAATATCTTGGGGAATTGACAAAAATAGGCCAAAAATGGGGCAGATAAAGACTTTTAGGATTGATTGTAAAAAGGTTGACATTTAG HWELVEPGYVEPASESLQTNAQQKKNDEMKLKDLKVKIYLFQAIDRTILKTILKKNTAKEIWDAMKKKYEGNARVRRSYLQALCREFEILEMKSGEGVTEYFSRVMIVANKMRTYGEDMQDVKVVEKILRSLTDNFNYIVSSIEESKDPNTLTIDELQSSLIVHEQKFQRRGGEEQALKVTNDEGRGRGSGSYRGRGRGTFNKANVHDLNEDFRHSVKLGNNTRMNVMGKGNVKLLINGVNHVVAEVYYIPDLSSNLLSIGQLQEKGMSILIKRGECKIFHPKMDLIIQIKMSNSRMFTLQAQTQISWGIDKNRPKMGQIKTFRIDCKKVDI*
BLAST of Cucsa.031190.1 vs. TrEMBL
Match: A5C8B4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004671 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.1e-81 Identity = 185/337 (54.90%), Postives = 221/337 (65.58%), Query Frame = 1
BLAST of Cucsa.031190.1 vs. TrEMBL
Match: A5B3I2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004365 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 6.5e-77 Identity = 169/362 (46.69%), Postives = 226/362 (62.43%), Query Frame = 1
BLAST of Cucsa.031190.1 vs. TrEMBL
Match: M5W8K4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025086mg PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 7.4e-73 Identity = 149/216 (68.98%), Postives = 176/216 (81.48%), Query Frame = 1
BLAST of Cucsa.031190.1 vs. TrEMBL
Match: A5B1F3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040588 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 2.2e-72 Identity = 155/262 (59.16%), Postives = 186/262 (70.99%), Query Frame = 1
BLAST of Cucsa.031190.1 vs. TrEMBL
Match: A5BQM4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036712 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 6.3e-72 Identity = 146/213 (68.54%), Postives = 171/213 (80.28%), Query Frame = 1
BLAST of Cucsa.031190.1 vs. NCBI nr
Match: gi|778688589|ref|XP_011652786.1| (PREDICTED: uncharacterized protein LOC105435094 [Cucumis sativus]) HSP 1 Score: 350.9 bits (899), Expect = 2.4e-93 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1
BLAST of Cucsa.031190.1 vs. NCBI nr
Match: gi|778688589|ref|XP_011652786.1| (PREDICTED: uncharacterized protein LOC105435094 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 5.0e-54 Identity = 120/187 (64.17%), Postives = 137/187 (73.26%), Query Frame = 1
HSP 2 Score: 311.6 bits (797), Expect = 1.6e-81 Identity = 185/337 (54.90%), Postives = 221/337 (65.58%), Query Frame = 1
BLAST of Cucsa.031190.1 vs. NCBI nr
Match: gi|147820839|emb|CAN65188.1| (hypothetical protein VITISV_004365 [Vitis vinifera]) HSP 1 Score: 295.8 bits (756), Expect = 9.3e-77 Identity = 169/362 (46.69%), Postives = 226/362 (62.43%), Query Frame = 1
BLAST of Cucsa.031190.1 vs. NCBI nr
Match: gi|985457677|ref|XP_015387654.1| (PREDICTED: uncharacterized protein LOC107177766 [Citrus sinensis]) HSP 1 Score: 290.4 bits (742), Expect = 3.9e-75 Identity = 148/180 (82.22%), Postives = 164/180 (91.11%), Query Frame = 1
BLAST of Cucsa.031190.1 vs. NCBI nr
Match: gi|595844877|ref|XP_007208825.1| (hypothetical protein PRUPE_ppa025086mg [Prunus persica]) HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72 Identity = 149/216 (68.98%), Postives = 176/216 (81.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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