Cucsa.281530 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCGGTTTATGTTGAGTATTTATTATGGCTGGGTTTGAGCATTTTTGGTTTGGGTATTGGCATCCTCTTGTGCCCTTTTGTGACTATTTGGCTTTTGAAACTTTCTAACTTGATTTTGAAGAGAATATTACTCTCATATTTAATTTTATTTAACTTCCAGCTAACTATGAGAGTGAACAGTGAGTCGTTTCCTTGATTTGATTTTTTCTTTGTAATACAATCCTTGAGTGATCAGTAAGCTGTTTCCTGATTGAGGTCTTGGATATTGTTTTACCTTGCCTAATAGTTGTTTATCTATTGTTTTCTGTTGTATTCAAGGTCAGAACGGAGATATCAAAATGCTATGAATTAATAAACAGATTAGGGAAAGGAGTTGTTTATCTTGGATCTTCAAGAATGGGGCCTGATCATGCTCATTACAAGCAAGCTTTCGAATTGAGTAGAGAGGTAACCTATTTTCCATCTTTATCTTTAATTTTAGAGGAAAACACAGAACGATAAACTGATAGATACCAAAGTTCAATCCTTTCAAGTTGGGTTGAATGTTAAGGAACAGAACATCCAAGTTAGTTGCATATGTAACCTTTGACTGTATGAGTATTTCTCGATCCATGCTATGCAGATTTCAGAACTTTTGGATTGCACTACTTGGTCAGGTGTCGGTCCGGGTCTTATGGATGCAGTTACAAAAGGTGCTTTACAGGCAGGAAACCCCGTAGGCGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACCTACCTACAGAAACTTATTTTACTTGCAGGTGATAGAGCTATATTCCATTAATTATCTGATAGTCATAGTACACAGCGAACAATGCTGCTTGAAATGCTTTATATAATACAGGTTCTTCTCTGCAAGAAAGCACGGGCTTGTTGATGCTGCAGTTAGAAGCTGTAGTTCTGATAGGACTGCTTTTGTTACTCTTCCGGGCGGCATTGGTACTTTCGATGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTTAGAAGAATAGGGTCAAAACTTCCAGTTCCGTTCCTATTGATGAATTACGACTCTTTCTACTCAAAGTTACTCGAATTTTTTAACGATTGTGAAAACTGGGGTACCTTGGCAAAGGGAGAGGTCGATTCTCTTTGGAAGGTCTGTGACAATAACGCGGATGCTGTGGCGTACTTGTCTAGTTTTTACAGTTTGTGTGATCAAGATAGAGTGAAGAATGAAGTTGGATTGGAAAGCACACATTGAACTTGAAGAGGAGTTGATTGAAATAATTTGTGAGTGTAAATTAGAGTATGGCTTTCTTCTCTCTACCCTTGTATTATTCTACAATAGCAATATACCATTGATAGTTTG TGCCGGTTTATGTTGAGTATTTATTATGGCTGGGTTTGAGCATTTTTGGTTTGGGTATTGGCATCCTCTTGTGCCCTTTTGTGACTATTTGGCTTTTGAAACTTTCTAACTTGATTTTGAAGAGAATATTACTCTCATATTTAATTTTATTTAACTTCCAGCTAACTATGAGAGTGAACAGTGAGTCGTTTCCTTGATTTGATTTTTTCTTTGTAATACAATCCTTGAGTGATCAGTAAGCTGTTTCCTGATTGAGGTCTTGGATATTGTTTTACCTTGCCTAATAGTTGTTTATCTATTGTTTTCTGTTGTATTCAAGGTCAGAACGGAGATATCAAAATGCTATGAATTAATAAACAGATTAGGGAAAGGAGTTGTTTATCTTGGATCTTCAAGAATGGGGCCTGATCATGCTCATTACAAGCAAGCTTTCGAATTGAGTAGAGAGATTTCAGAACTTTTGGATTGCACTACTTGGTCAGGTGTCGGTCCGGGTCTTATGGATGCAGTTACAAAAGGTGCTTTACAGGCAGGAAACCCCGTAGGCGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACCTACCTACAGAAACTTATTTTACTTGCAGGTTCTTCTCTGCAAGAAAGCACGGGCTTGTTGATGCTGCAGTTAGAAGCTGTAGTTCTGATAGGACTGCTTTTGTTACTCTTCCGGGCGGCATTGGTACTTTCGATGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTTAGAAGAATAGGGTCAAAACTTCCAGTTCCGTTCCTATTGATGAATTACGACTCTTTCTACTCAAAGTTACTCGAATTTTTTAACGATTGTGAAAACTGGGGTACCTTGGCAAAGGGAGAGGTCGATTCTCTTTGGAAGGTCTGTGACAATAACGCGGATGCTGTGGCGTACTTGTCTAGTTTTTACAGTTTGTGTGATCAAGATAGAGTGAAGAATGAAGTTGGATTGGAAAGCACACATTGAACTTGAAGAGGAGTTGATTGAAATAATTTGTGAGTGTAAATTAGAGTATGGCTTTCTTCTCTCTACCCTTGTATTATTCTACAATAGCAATATACCATTGATAGTTTG ATGGGGCCTGATCATGCTCATTACAAGCAAGCTTTCGAATTGAGTAGAGAGATTTCAGAACTTTTGGATTGCACTACTTGGTCAGGTGTCGGTCCGGGTCTTATGGATGCAGTTACAAAAGGTGCTTTACAGGCAGGAAACCCCGTAGGCGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACCTACCTACAGAAACTTATTTTACTTGCAGGTTCTTCTCTGCAAGAAAGCACGGGCTTGTTGATGCTGCAGTTAGAAGCTGTAGTTCTGATAGGACTGCTTTTGTTACTCTTCCGGGCGGCATTGGTACTTTCGATGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTTAGAAGAATAGGGTCAAAACTTCCAGTTCCGTTCCTATTGATGAATTACGACTCTTTCTACTCAAAGTTACTCGAATTTTTTAACGATTGTGAAAACTGGGGTACCTTGGCAAAGGGAGAGGTCGATTCTCTTTGGAAGGTCTGTGACAATAACGCGGATGCTGTGGCGTACTTGTCTAGTTTTTACAGTTTGTGTGATCAAGATAGAGTGAAGAATGAAGTTGGATTGGAAAGCACACATTGA MGPDHAHYKQAFELSREISELLDCTTWSGVGPGLMDAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDCENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH*
BLAST of Cucsa.281530 vs. TrEMBL
Match: A0A0A0LEH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G764560 PE=4 SV=1) HSP 1 Score: 610.5 bits (1573), Expect = 1.1e-171 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Cucsa.281530 vs. TrEMBL
Match: D7T867_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g01580 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 3.3e-112 Identity = 204/293 (69.62%), Postives = 238/293 (81.23%), Query Frame = 1
BLAST of Cucsa.281530 vs. TrEMBL
Match: V4WGG3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009024mg PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 1.2e-111 Identity = 198/299 (66.22%), Postives = 235/299 (78.60%), Query Frame = 1
BLAST of Cucsa.281530 vs. TrEMBL
Match: W9R401_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009527 PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 8.1e-111 Identity = 198/300 (66.00%), Postives = 237/300 (79.00%), Query Frame = 1
BLAST of Cucsa.281530 vs. TrEMBL
Match: A0A0B2NQY2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_006338 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 1.2e-109 Identity = 196/300 (65.33%), Postives = 235/300 (78.33%), Query Frame = 1
BLAST of Cucsa.281530 vs. TAIR10
Match: AT1G50575.1 (AT1G50575.1 Putative lysine decarboxylase family protein) HSP 1 Score: 338.6 bits (867), Expect = 4.0e-93 Identity = 159/239 (66.53%), Postives = 197/239 (82.43%), Query Frame = 1
BLAST of Cucsa.281530 vs. NCBI nr
Match: gi|449467507|ref|XP_004151464.1| (PREDICTED: uncharacterized protein LOC101207783 [Cucumis sativus]) HSP 1 Score: 610.5 bits (1573), Expect = 1.5e-171 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Cucsa.281530 vs. NCBI nr
Match: gi|659125997|ref|XP_008462958.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Cucumis melo]) HSP 1 Score: 581.3 bits (1497), Expect = 1.0e-162 Identity = 283/298 (94.97%), Postives = 289/298 (96.98%), Query Frame = 1
BLAST of Cucsa.281530 vs. NCBI nr
Match: gi|1009171356|ref|XP_015866697.1| (PREDICTED: probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 420.2 bits (1079), Expect = 2.9e-114 Identity = 203/299 (67.89%), Postives = 236/299 (78.93%), Query Frame = 1
BLAST of Cucsa.281530 vs. NCBI nr
Match: gi|694414405|ref|XP_009335422.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Pyrus x bretschneideri]) HSP 1 Score: 417.9 bits (1073), Expect = 1.5e-113 Identity = 200/297 (67.34%), Postives = 244/297 (82.15%), Query Frame = 1
BLAST of Cucsa.281530 vs. NCBI nr
Match: gi|731433104|ref|XP_002276560.2| (PREDICTED: probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL5 [Vitis vinifera]) HSP 1 Score: 416.8 bits (1070), Expect = 3.3e-113 Identity = 206/295 (69.83%), Postives = 240/295 (81.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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