Cucsa.281530.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.281530.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Cytokinin riboside 5'-monophosphate phosphoribohydrolase
Location	scaffold02639 : 181115 .. 183983 (-)
Sequence length	1231

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCAAAGCTCTGGGCGGCCAGCCAAAATCTGAATTGACGTTCAAATTGGAATTTTCATTCCCCCATTCTCACACTCCCAAGTCCCATAAGGTTAAAGCCCTCGAAATTCAAATCCCAATTTTGTCAACTCTTTACTCATCTGTTTCTTCCACAACTGTGAACATTTGCACGAATTTGTATTTTAAAAAAATCCCAAGAATCGAATCCTCAGAACAATCGTACTGTTCACGATGAGTTTCTCCATGATGGGTTCTTCGGGATGTGAAATTTTGATCCGAAATTCTCACCAGAAGACTGTGAAGTTACAGTTGTTCCATGAAAAAGAGAAGCAGATGGTGTTCAAGTTCTCCAAATCTGGCTGTAACCCTGCGAGAGCTCTACTTAGTAAGCATGAAGCGACTGAGTTTGAAGAGAGGACAAGTCCCATCGAGGTGCTTTCACTTTCCCCACACTTTTTGAATCCTGTATTTGTTTCTTCTGAAACCTCATGATTACTTCAATTTACTTTTTATTCTATGATATGTGAATTACAAATGTCTATATCTAGTAAATATATCAATGAGGACAAAGTGTCCAGATCCATGGGATTCACAAGAAACTACAGTTATTGTCTGTTTCAGTACATGGGATTTGTTGGGTTTTTGAAGTTATGGAACTGAAATAATGTTAAGAGTTTTAACATATTTTAGCCTTTTCTGCTGGGCTGTCATTGTGTTGTTATTTCCATTTCCCCATTTCTTTGATTGTGGAGTTCAATGGAGCATTCTTACAATTGGAGCGGTTTTAGTTAAAATCTAAGAGTTCAGAATCAAGTTGGTTCTACCTTAATTTGACTATACCAATGTGTCTTGCTTTTTTGCTTGTTCCTTGTCGAAAAGGAAATCAATAGATCTATTACTACTTAATGATTCAACCGATCTCCTGTTTTTGGTGAAAGATCAAGAGAGGATCTAACTCGATCACGAGAGAGAACACGGAGAAATAACCATAATTCAAATACCTGGGATAAGGATTTCCTGAACTCGAATAGGAAGTTCCCATTGGTCATGTTTTCTTTTTTCTTGATATGTTCATGATACATAGGTCAAAGTTAGTTGCTCACTGCATAAAGAGATTGTATGTTTCTTGCTAGGGATGTCAGTCAGTTCACTGTTTCCTTTTTTCTATGTTGTGGCAGGCGTCAGTTGTGCATCTTGAATATGTTATTTGTACTTTTATCTTTTACGCTTTGCTAGTGAAATATGACAGTTTATATTTGATTCTATCTTTCTTAATGAAGTTTATTATCTTTAGATTTTATCTTTAAAGGTCAAAACATCTTTTAATTTTAACAATGACTTGTTTATCCATCACTTTGGACTGTAAACATGAACAGGGATGAAAATAGTACCCCTCTTGTAGTCGAGCTGCTGTTGTTTAGAGATTTGTTATTTCGGTTACGTTTTTAAGTGTTCCAATGGCTTGGTAAGACAGGCTAATTATGTAGGTGCCGGTTTATGTTGAGTATTTATTATGGCTGGGTTTGAGCATTTTTGGTTTGGGTATTGGCATCCTCTTGTGCCCTTTTGTGACTATTTGGCTTTTGAAACTTTCTAACTTGATTTTGAAGAGAATATTACTCTCATATTTAATTTTATTTAACTTCCAGCTAACTATGAGAGTGAACAGTGAGTCGTTTCCTTGATTTGATTTTTTCTTTGTAATACAATCCTTGAGTGATCAGTAAGCTGTTTCCTGATTGAGGTCTTGGATATTGTTTTACCTTGCCTAATAGTTGTTTATCTATTGTTTTCTGTTGTATTCAAGGTCAGAACGGAGATATCAAAATGCTATGAATTAATAAACAGATTAGGGAAAGGAGTTGTTTATCTTGGATCTTCAAGAATGGGGCCTGATCATGCTCATTACAAGCAAGCTTTCGAATTGAGTAGAGAGGTAACCTATTTTCCATCTTTATCTTTAATTTTAGAGGAAAACACAGAACGATAAACTGATAGATACCAAAGTTCAATCCTTTCAAGTTGGGTTGAATGTTAAGGAACAGAACATCCAAGTTAGTTGCATATGTAACCTTTGACTGTATGAGTATTTCTCGATCCATGCTATGCAGATTTCAGAACTTTTGGATTGCACTACTTGGTCAGGTGTCGGTCCGGGTCTTATGGATGCAGTTACAAAAGGTGCTTTACAGGCAGGAAACCCCGTAGGCGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACCTACCTACAGAAACTTATTTTACTTGCAGGTGATAGAGCTATATTCCATTAATTATCTGATAGTCATAGTACACAGCGAACAATGCTGCTTGAAATGCTTTATATAATACAGGTTCTTCTCTGCAAGAAAGCACGGGCTTGTTGATGCTGCAGTTAGAAGCTGTAGTTCTGATAGGACTGCTTTTGTTACTCTTCCGGGCGGCATTGGTACTTTCGATGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTTAGAAGAATAGGGTCAAAACTTCCAGTTCCGTTCCTATTGATGAATTACGACTCTTTCTACTCAAAGTTACTCGAATTTTTTAACGATTGTGAAAACTGGGGTACCTTGGCAAAGGGAGAGGTCGATTCTCTTTGGAAGGTCTGTGACAATAACGCGGATGCTGTGGCGTACTTGTCTAGTTTTTACAGTTTGTGTGATCAAGATAGAGTGAAGAATGAAGTTGGATTGGAAAGCACACATTGAACTTGAAGAGGAGTTGATTGAAATAATTTGTGAGTGTAAATTAGAGTATGGCTTTCTTCTCTCTACCCTTGTATTATTCTACAATAGCAATATACCATTGATAGTTTG

mRNA sequence

CTTCAAAGCTCTGGGCGGCCAGCCAAAATCTGAATTGACGTTCAAATTGGAATTTTCATTCCCCCATTCTCACACTCCCAAGTCCCATAAGGTTAAAGCCCTCGAAATTCAAATCCCAATTTTGTCAACTCTTTACTCATCTGTTTCTTCCACAACTGTGAACATTTGCACGAATTTGTATTTTAAAAAAATCCCAAGAATCGAATCCTCAGAACAATCGTACTGTTCACGATGAGTTTCTCCATGATGGGTTCTTCGGGATGTGAAATTTTGATCCGAAATTCTCACCAGAAGACTGTGAAGTTACAGTTGTTCCATGAAAAAGAGAAGCAGATGGTGTTCAAGTTCTCCAAATCTGGCTGTAACCCTGCGAGAGCTCTACTTAGTAAGCATGAAGCGACTGAGTTTGAAGAGAGGACAAGTCCCATCGAGAACGGAGATATCAAAATGCTATGAATTAATAAACAGATTAGGGAAAGGAGTTGTTTATCTTGGATCTTCAAGAATGGGGCCTGATCATGCTCATTACAAGCAAGCTTTCGAATTGAGTAGAGAGATTTCAGAACTTTTGGATTGCACTACTTGGTCAGGTGTCGGTCCGGGTCTTATGGATGCAGTTACAAAAGGTGCTTTACAGGCAGGAAACCCCGTAGGCGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACCTACCTACAGAAACTTATTTTACTTGCAGGTTCTTCTCTGCAAGAAAGCACGGGCTTGTTGATGCTGCAGTTAGAAGCTGTAGTTCTGATAGGACTGCTTTTGTTACTCTTCCGGGCGGCATTGGTACTTTCGATGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTTAGAAGAATAGGGTCAAAACTTCCAGTTCCGTTCCTATTGATGAATTACGACTCTTTCTACTCAAAGTTACTCGAATTTTTTAACGATTGTGAAAACTGGGGTACCTTGGCAAAGGGAGAGGTCGATTCTCTTTGGAAGGTCTGTGACAATAACGCGGATGCTGTGGCGTACTTGTCTAGTTTTTACAGTTTGTGTGATCAAGATAGAGTGAAGAATGAAGTTGGATTGGAAAGCACACATTGAACTTGAAGAGGAGTTGATTGAAATAATTTGTGAGTGTAAATTAGAGTATGGCTTTCTTCTCTCTACCCTTGTATTATTCTACAATAGCAATATACCATTGATAGTTTG

Coding sequence (CDS)

ATGAAAAAGAGAAGCAGATGGTGTTCAAGTTCTCCAAATCTGGCTGTAACCCTGCGAGAGCTCTACTTAGTAAGCATGAAGCGACTGAGTTTGAAGAGAGGACAAGTCCCATCGAGAACGGAGATATCAAAATGCTATGAATTAATAAACAGATTAGGGAAAGGAGTTGTTTATCTTGGATCTTCAAGAATGGGGCCTGATCATGCTCATTACAAGCAAGCTTTCGAATTGAGTAGAGAGATTTCAGAACTTTTGGATTGCACTACTTGGTCAGGTGTCGGTCCGGGTCTTATGGATGCAGTTACAAAAGGTGCTTTACAGGCAGGAAACCCCGTAGGCGGATTCAAAATCGGTAGAGAATCTGGTGAATGGACATCCTCAAAGTTTCATCCATACCTACCTACAGAAACTTATTTTACTTGCAGGTTCTTCTCTGCAAGAAAGCACGGGCTTGTTGATGCTGCAGTTAGAAGCTGTAGTTCTGATAGGACTGCTTTTGTTACTCTTCCGGGCGGCATTGGTACTTTCGATGAGGTGTTTGAGATTCTAGCTTTGATTCAGCTTAGAAGAATAGGGTCAAAACTTCCAGTTCCGTTCCTATTGATGAATTACGACTCTTTCTACTCAAAGTTACTCGAATTTTTTAACGATTGTGAAAACTGGGGTACCTTGGCAAAGGGAGAGGTCGATTCTCTTTGGAAGGTCTGTGACAATAACGCGGATGCTGTGGCGTACTTGTCTAGTTTTTACAGTTTGTGTGATCAAGATAGAGTGAAGAATGAAGTTGGATTGGAAAGCACACATTGA

Protein sequence

MKKRSRWCSSSPNLAVTLRELYLVSMKRLSLKRGQVPSRTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLMDAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDCENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH*

Homology

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BLAST of Cucsa.281530.2 vs. TrEMBL
Match: A0A0A0LEH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G764560 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 2.2e-131
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 39  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 98
           RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM
Sbjct: 69  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 128

Query: 99  DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 158
           DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS
Sbjct: 129 DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 188

Query: 159 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 218
           CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC
Sbjct: 189 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 248

Query: 219 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH 269
           ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH
Sbjct: 249 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH 298

[Close]

BLAST of Cucsa.281530.2 vs. TrEMBL
Match: V4TYT9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009024mg PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 3.1e-101
Identity = 175/249 (70.28%), Postives = 207/249 (83.13%), Query Frame = 1


Query: 20  ELYLVSMKRLSLKRGQVPSRTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSR 79
           EL   S+  L+L R +   R EI +CYELI+RLG+GVVYLGSSRMGPDH HY Q+FEL  
Sbjct: 13  ELCFASVSSLTLMRDRAQMRKEIEQCYELIHRLGRGVVYLGSSRMGPDHPHYLQSFELGG 72

Query: 80  EISELLDCTTWSGVGPGLMDAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYF 139
           EI+ LLDCTTWSG GPGLMDAVTKGA+QAG PVGGFK+G+E+GEWT+S FHPYLP ETY 
Sbjct: 73  EIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPYLPLETYL 132

Query: 140 TCRFFSARKHGLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPF 199
           TCRFFSARKHGL+D AVR+ S DRTA V LPGG+GT DE+FEILALIQL RIGS+LPVPF
Sbjct: 133 TCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 192

Query: 200 LLMNYDSFYSKLLEFFNDCENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVK 259
           L+MNYDSFY KLL+F  DCE+WGT+AK EV SLWK+CD+N++A++YL+ FY L   D+  
Sbjct: 193 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 252

Query: 260 NEVGLESTH 269
           +EV L+STH
Sbjct: 253 HEVNLKSTH 261

[Close]

BLAST of Cucsa.281530.2 vs. TrEMBL
Match: V4WGG3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009024mg PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.1e-98
Identity = 169/230 (73.48%), Postives = 198/230 (86.09%), Query Frame = 1


Query: 39  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 98
           R EI +CYELI+RLG+GVVYLGSSRMGPDH HY Q+FEL  EI+ LLDCTTWSG GPGLM
Sbjct: 70  RKEIEQCYELIHRLGRGVVYLGSSRMGPDHPHYLQSFELGGEIARLLDCTTWSGAGPGLM 129

Query: 99  DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 158
           DAVTKGA+QAG PVGGFK+G+E+GEWT+S FHPYLP ETY TCRFFSARKHGL+D AVR+
Sbjct: 130 DAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPYLPLETYLTCRFFSARKHGLIDCAVRN 189

Query: 159 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 218
            S DRTA V LPGG+GT DE+FEILALIQL RIGS+LPVPFL+MNYDSFY KLL+F  DC
Sbjct: 190 DSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC 249

Query: 219 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH 269
           E+WGT+AK EV SLWK+CD+N++A++YL+ FY L   D+  +EV L+STH
Sbjct: 250 EDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVNLKSTH 299

[Close]

BLAST of Cucsa.281530.2 vs. TrEMBL
Match: A0A061F4E3_THECC (Lysine decarboxylase family protein, putative isoform 3 OS=Theobroma cacao GN=TCM_030747 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 9.2e-98
Identity = 170/243 (69.96%), Postives = 199/243 (81.89%), Query Frame = 1


Query: 26  MKRLSLKRGQVPSRTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELL 85
           M  L+LK+ Q P R EI +CYELI+RLG+GVVYLGSSRMGP H HY Q  ELSREI+ LL
Sbjct: 1   MNLLTLKKEQAPMRKEIEQCYELIHRLGRGVVYLGSSRMGPGHPHYSQTLELSREIANLL 60

Query: 86  DCTTWSGVGPGLMDAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFS 145
           DCTTW+G GPGLMDA   GALQA  PVGGFKIGRE+GEW++S FHPYLP+ETY  CRFFS
Sbjct: 61  DCTTWTGAGPGLMDAAITGALQAKKPVGGFKIGREAGEWSTSNFHPYLPSETYLACRFFS 120

Query: 146 ARKHGLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYD 205
           ARKHGLVDAAVRS + D+TA V LPGG+GT DE+FEILALIQL RIGS+LPVPF++MNYD
Sbjct: 121 ARKHGLVDAAVRSSNFDKTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFIVMNYD 180

Query: 206 SFYSKLLEFFNDCENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLE 265
           SFY+KLL+F N CE+WGT++KGEV SLWK+CD N++A+AYL+ FY L   D  K E  L 
Sbjct: 181 SFYAKLLDFLNVCEDWGTVSKGEVSSLWKICDTNSEALAYLAEFYDLPFPDEGKQETELR 240

Query: 266 STH 269
           + H
Sbjct: 241 TAH 243

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BLAST of Cucsa.281530.2 vs. TrEMBL
Match: D7T867_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g01580 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.7e-97
Identity = 171/226 (75.66%), Postives = 197/226 (87.17%), Query Frame = 1


Query: 39  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 98
           R EI +CYELIN+LG+GVVYLGSSRMGPDH+HY QA EL RE++ LLDCT+W+G GPGLM
Sbjct: 68  RKEIEQCYELINKLGRGVVYLGSSRMGPDHSHYLQALELGREVANLLDCTSWTGAGPGLM 127

Query: 99  DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 158
           DA +KGALQAG PVGGFKIGRE+G+ T+  FHPYLP+ETYFTCRFFSARKHGLVDAAVRS
Sbjct: 128 DAASKGALQAGKPVGGFKIGREAGQQTALSFHPYLPSETYFTCRFFSARKHGLVDAAVRS 187

Query: 159 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 218
           C+ DRTA V LPGGIGT DEVFEILALIQL+RIGS+LPVPFLLMNYDSFYSKLL+F +D 
Sbjct: 188 CNCDRTAVVALPGGIGTLDEVFEILALIQLQRIGSELPVPFLLMNYDSFYSKLLDFLSDS 247

Query: 219 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGL 265
           E WGT+ KGEV+SLWKVC+NN++A++YL+ FY L   D  K E GL
Sbjct: 248 ECWGTVCKGEVESLWKVCNNNSEALSYLAEFYDLPLGDNGKCETGL 293

[Close]

BLAST of Cucsa.281530.2 vs. TAIR10
Match: AT1G50575.1 (AT1G50575.1 Putative lysine decarboxylase family protein)

HSP 1 Score: 322.8 bits (826), Expect = 2.0e-88
Identity = 147/216 (68.06%), Postives = 182/216 (84.26%), Query Frame = 1


Query: 39  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 98
           + E+  C++L++RLG+G+VYLGS+R+ P+H+HY QA ELSRE + LLDCTTWSG GPGLM
Sbjct: 74  KKELEICFDLVHRLGRGIVYLGSARIPPNHSHYLQAQELSREAATLLDCTTWSGAGPGLM 133

Query: 99  DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 158
           DAVT+GAL+A  PVGG KI +E+GEWT+SKFHPYLP + Y TCRFFSARKHGLVDA +R+
Sbjct: 134 DAVTEGALEAEKPVGGIKIEKEAGEWTASKFHPYLPPQNYHTCRFFSARKHGLVDAVIRN 193

Query: 159 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 218
             S++TA + LPGGIGT DE+FEILALIQL RIGS LPVPF++MNYD+FYSKLLEF   C
Sbjct: 194 NVSEKTAIIALPGGIGTLDEMFEILALIQLERIGSALPVPFIVMNYDAFYSKLLEFIETC 253

Query: 219 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCD 255
           EN GT++KGEV +LWKVC+NN +A+ YL+ FY L D
Sbjct: 254 ENLGTVSKGEVSALWKVCNNNFEALTYLAEFYDLPD 289

[Close]

BLAST of Cucsa.281530.2 vs. NCBI nr
Match: gi|449467507|ref|XP_004151464.1| (PREDICTED: uncharacterized protein LOC101207783 [Cucumis sativus])

HSP 1 Score: 476.5 bits (1225), Expect = 3.1e-131
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 39  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 98
           RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM
Sbjct: 69  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 128

Query: 99  DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 158
           DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS
Sbjct: 129 DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 188

Query: 159 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 218
           CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC
Sbjct: 189 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 248

Query: 219 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH 269
           ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH
Sbjct: 249 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH 298

[Close]

BLAST of Cucsa.281530.2 vs. NCBI nr
Match: gi|659125997|ref|XP_008462958.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 7.4e-125
Identity = 219/230 (95.22%), Postives = 224/230 (97.39%), Query Frame = 1


Query: 39  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 98
           RTEISKCYELINRLGKGVVYLGSSRMGPDH HYKQAFELSREISELLDCTTWSGVGPGLM
Sbjct: 69  RTEISKCYELINRLGKGVVYLGSSRMGPDHPHYKQAFELSREISELLDCTTWSGVGPGLM 128

Query: 99  DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 158
           DAVTKGALQAGNPVGGFKIGRESGEWTSSK HPYLPTETYFTCRFFSARKHGLVDAAVRS
Sbjct: 129 DAVTKGALQAGNPVGGFKIGRESGEWTSSKIHPYLPTETYFTCRFFSARKHGLVDAAVRS 188

Query: 159 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 218
           CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGS+ PVPFLLMNYDSFYSKLLEFFN+C
Sbjct: 189 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSEFPVPFLLMNYDSFYSKLLEFFNNC 248

Query: 219 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH 269
           ENWGTLAKGEVDSLWKVCDNNA+AVAYLSSFY+LC  D VKNEVGLEST+
Sbjct: 249 ENWGTLAKGEVDSLWKVCDNNAEAVAYLSSFYNLCQHDSVKNEVGLESTN 298

[Close]

BLAST of Cucsa.281530.2 vs. NCBI nr
Match: gi|567920984|ref|XP_006452498.1| (hypothetical protein CICLE_v10009024mg [Citrus clementina])

HSP 1 Score: 376.3 bits (965), Expect = 4.4e-101
Identity = 175/249 (70.28%), Postives = 207/249 (83.13%), Query Frame = 1


Query: 20  ELYLVSMKRLSLKRGQVPSRTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSR 79
           EL   S+  L+L R +   R EI +CYELI+RLG+GVVYLGSSRMGPDH HY Q+FEL  
Sbjct: 13  ELCFASVSSLTLMRDRAQMRKEIEQCYELIHRLGRGVVYLGSSRMGPDHPHYLQSFELGG 72

Query: 80  EISELLDCTTWSGVGPGLMDAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYF 139
           EI+ LLDCTTWSG GPGLMDAVTKGA+QAG PVGGFK+G+E+GEWT+S FHPYLP ETY 
Sbjct: 73  EIARLLDCTTWSGAGPGLMDAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPYLPLETYL 132

Query: 140 TCRFFSARKHGLVDAAVRSCSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPF 199
           TCRFFSARKHGL+D AVR+ S DRTA V LPGG+GT DE+FEILALIQL RIGS+LPVPF
Sbjct: 133 TCRFFSARKHGLIDCAVRNDSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPF 192

Query: 200 LLMNYDSFYSKLLEFFNDCENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVK 259
           L+MNYDSFY KLL+F  DCE+WGT+AK EV SLWK+CD+N++A++YL+ FY L   D+  
Sbjct: 193 LVMNYDSFYKKLLDFLGDCEDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRV 252

Query: 260 NEVGLESTH 269
           +EV L+STH
Sbjct: 253 HEVNLKSTH 261

[Close]

BLAST of Cucsa.281530.2 vs. NCBI nr
Match: gi|567920986|ref|XP_006452499.1| (hypothetical protein CICLE_v10009024mg [Citrus clementina])

HSP 1 Score: 367.9 bits (943), Expect = 1.6e-98
Identity = 169/230 (73.48%), Postives = 198/230 (86.09%), Query Frame = 1


Query: 39  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 98
           R EI +CYELI+RLG+GVVYLGSSRMGPDH HY Q+FEL  EI+ LLDCTTWSG GPGLM
Sbjct: 70  RKEIEQCYELIHRLGRGVVYLGSSRMGPDHPHYLQSFELGGEIARLLDCTTWSGAGPGLM 129

Query: 99  DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 158
           DAVTKGA+QAG PVGGFK+G+E+GEWT+S FHPYLP ETY TCRFFSARKHGL+D AVR+
Sbjct: 130 DAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPYLPLETYLTCRFFSARKHGLIDCAVRN 189

Query: 159 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 218
            S DRTA V LPGG+GT DE+FEILALIQL RIGS+LPVPFL+MNYDSFY KLL+F  DC
Sbjct: 190 DSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC 249

Query: 219 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH 269
           E+WGT+AK EV SLWK+CD+N++A++YL+ FY L   D+  +EV L+STH
Sbjct: 250 EDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVNLKSTH 299

[Close]

BLAST of Cucsa.281530.2 vs. NCBI nr
Match: gi|568842038|ref|XP_006474960.1| (PREDICTED: probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 isoform X2 [Citrus sinensis])

HSP 1 Score: 367.9 bits (943), Expect = 1.6e-98
Identity = 169/230 (73.48%), Postives = 198/230 (86.09%), Query Frame = 1


Query: 39  RTEISKCYELINRLGKGVVYLGSSRMGPDHAHYKQAFELSREISELLDCTTWSGVGPGLM 98
           R EI +CYELI+RLG+GVVYLGSSRMGPDH HY Q+FEL  EI+ LLDCTTWSG GPGLM
Sbjct: 38  RKEIEQCYELIHRLGRGVVYLGSSRMGPDHPHYLQSFELGGEIARLLDCTTWSGAGPGLM 97

Query: 99  DAVTKGALQAGNPVGGFKIGRESGEWTSSKFHPYLPTETYFTCRFFSARKHGLVDAAVRS 158
           DAVTKGA+QAG PVGGFK+G+E+GEWT+S FHPYLP ETY TCRFFSARKHGL+D AVR+
Sbjct: 98  DAVTKGAMQAGKPVGGFKVGKEAGEWTASNFHPYLPLETYLTCRFFSARKHGLIDCAVRN 157

Query: 159 CSSDRTAFVTLPGGIGTFDEVFEILALIQLRRIGSKLPVPFLLMNYDSFYSKLLEFFNDC 218
            S DRTA V LPGG+GT DE+FEILALIQL RIGS+LPVPFL+MNYDSFY KLL+F  DC
Sbjct: 158 DSCDRTAVVALPGGVGTLDEMFEILALIQLERIGSELPVPFLVMNYDSFYKKLLDFLGDC 217

Query: 219 ENWGTLAKGEVDSLWKVCDNNADAVAYLSSFYSLCDQDRVKNEVGLESTH 269
           E+WGT+AK EV SLWK+CD+N++A++YL+ FY L   D+  +EV L+STH
Sbjct: 218 EDWGTVAKDEVASLWKICDSNSEALSYLAEFYDLSSIDKRVHEVNLKSTH 267

The following BLAST results are available for this feature:

BLAST of Cucsa.281530.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEH2_CUCSA	2.2e-131	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G764560 PE=4 SV=1	[more]
V4TYT9_9ROSI	3.1e-101	70.28	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009024mg PE=4 SV=1	[more]
V4WGG3_9ROSI	1.1e-98	73.48	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009024mg PE=4 SV=1	[more]
A0A061F4E3_THECC	9.2e-98	69.96	Lysine decarboxylase family protein, putative isoform 3 OS=Theobroma cacao GN=TC...	[more]
D7T867_VITVI	2.7e-97	75.66	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g01580 PE=4 SV=...	[more]

BLAST of Cucsa.281530.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50575.1	2.0e-88	68.06	Putative lysine decarboxylase family protein	[more]

BLAST of Cucsa.281530.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467507\|ref\|XP_004151464.1\|	3.1e-131	100.00	PREDICTED: uncharacterized protein LOC101207783 [Cucumis sativus]	[more]
gi\|659125997\|ref\|XP_008462958.1\|	7.4e-125	95.22	PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Cucumi...	[more]
gi\|567920984\|ref\|XP_006452498.1\|	4.4e-101	70.28	hypothetical protein CICLE_v10009024mg [Citrus clementina]	[more]
gi\|567920986\|ref\|XP_006452499.1\|	1.6e-98	73.48	hypothetical protein CICLE_v10009024mg [Citrus clementina]	[more]
gi\|568842038\|ref\|XP_006474960.1\|	1.6e-98	73.48	PREDICTED: probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016829	lyase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.281530	Cucsa.281530	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.281530.2	Cucsa.281530.2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.281530.2.CDS.4	Cucsa.281530.2.CDS.4	CDS
Cucsa.281530.2.CDS.3	Cucsa.281530.2.CDS.3	CDS
Cucsa.281530.2.CDS.2	Cucsa.281530.2.CDS.2	CDS
Cucsa.281530.2.CDS.1	Cucsa.281530.2.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.281530.2.three_prime_UTR.1	Cucsa.281530.2.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.281530.2.five_prime_UTR.1	Cucsa.281530.2.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.450		coord: 46..246 score: 1.8
None	No IPR available	PANTHER	PTHR31208	FAMILY NOT NAMED	coord: 38..261 score: 3.7E
None	No IPR available	PANTHER	PTHR31208:SF1	SUBFAMILY NOT NAMED	coord: 38..261 score: 3.7E
None	No IPR available	unknown	SSF102405	MCP/YpsA-like	coord: 40..246 score: 1.42