Cucsa.241900 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.241900
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDof zinc finger protein
Locationscaffold02047 : 1755766 .. 1756533 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGAGGATGGAAACCTATGGTGGAAATATCACCAAATTGTCCAAGGTGTGGCTCTTCCAATACTAAGTTTTGTTATTACAACAACTATAGCCTTACCCAGCCTCGCTACTTTTGCAAAGGCTGTCGTCGCTATTGGACCAAAGGCGGTTCCCTCCGTAATGTTCCGGTCGGTGGTGGTTGTCGGAAGAATCGACGTTCGCCCAAGCCCTTAACCCTAACCCCATCTTCCTCAAACCCTAAATTTCACCACACTAACGATAGTGATTACCAACGATACCACTGTGGTCTCTCCGACTCCGATGTATCACCAACCATCGATTTGGCAGTCGTCTACGCCAATTTTGTGAACCAGAAACCAGACACGCCTGAAACTATACCAACCTCGAACGCAGCTGGCCACTTTCCTGTTTCCGTTCAGAGTAGGGTGGTTGGATGTGGGAATTTTTGTGAGTTTTCCATGCAGGAATGTGGATTGGGGGCCAATGATTATCAAGTGGGAGGTGGTTGCTTTGGGTTAGAGGAGAGTAGTAATAATAATGAAAGTCAAGTGGCGGGGCGTGAGCTTCAATTGCCGCCGTTGCCGGGGGAGGACATGGTGGAAGCATGGGGAAATTCTATGATAATGGTGAATAATCATCATCGTTTGCAACCAACAAGAGTAGAAATGTTCGAAGACCCAAATTTGCTGAGTGGTAATTGGAGCCCTATTGATCTGTCTAATTATGATACATTCTCAAAAGGCTTAACAAATATACATATATAA

mRNA sequence

ATGGAGAGAGGATGGAAACCTATGGTGGAAATATCACCAAATTGTCCAAGGTGTGGCTCTTCCAATACTAAGTTTTGTTATTACAACAACTATAGCCTTACCCAGCCTCGCTACTTTTGCAAAGGCTGTCGTCGCTATTGGACCAAAGGCGGTTCCCTCCGTAATGTTCCGGTCGGTGGTGGTTGTCGGAAGAATCGACTCGTCTACGCCAATTTTGTGAACCAGAAACCAGACACGCCTGAAACTATACCAACCTCGAACGCAGCTGGCCACTTTCCTGTTTCCGTTCAGAGTAGGGTGGTTGGATGTGGGAATTTTTGTGAGTTTTCCATGCAGGAATGTGGATTGGGGGCCAATGATTATCAAGTGGGAGGTGGTTGCTTTGGGTTAGAGGAGAGTAGTAATAATAATGAAAGTCAAGTGGCGGGGCGTGAGCTTCAATTGCCGCCGTTGCCGGGGGAGGACATGGTGGAAGCATGGGGAAATTCTATGATAATGGTGAATAATCATCATCGTTTGCAACCAACAAGAGTAGAAATGTTCGAAGACCCAAATTTGCTGAGTGGTAATTGGAGCCCTATTGATCTGTCTAATTATGATACATTCTCAAAAGGCTTAACAAATATACATATATAA

Coding sequence (CDS)

ATGGAGAGAGGATGGAAACCTATGGTGGAAATATCACCAAATTGTCCAAGGTGTGGCTCTTCCAATACTAAGTTTTGTTATTACAACAACTATAGCCTTACCCAGCCTCGCTACTTTTGCAAAGGCTGTCGTCGCTATTGGACCAAAGGCGGTTCCCTCCGTAATGTTCCGGTCGGTGGTGGTTGTCGGAAGAATCGACTCGTCTACGCCAATTTTGTGAACCAGAAACCAGACACGCCTGAAACTATACCAACCTCGAACGCAGCTGGCCACTTTCCTGTTTCCGTTCAGAGTAGGGTGGTTGGATGTGGGAATTTTTGTGAGTTTTCCATGCAGGAATGTGGATTGGGGGCCAATGATTATCAAGTGGGAGGTGGTTGCTTTGGGTTAGAGGAGAGTAGTAATAATAATGAAAGTCAAGTGGCGGGGCGTGAGCTTCAATTGCCGCCGTTGCCGGGGGAGGACATGGTGGAAGCATGGGGAAATTCTATGATAATGGTGAATAATCATCATCGTTTGCAACCAACAAGAGTAGAAATGTTCGAAGACCCAAATTTGCTGAGTGGTAATTGGAGCCCTATTGATCTGTCTAATTATGATACATTCTCAAAAGGCTTAACAAATATACATATATAA

Protein sequence

MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRLVYANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGGCFGLEESSNNNESQVAGRELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNLLSGNWSPIDLSNYDTFSKGLTNIHI*
Homology
[Close]
BLAST of Cucsa.241900 vs. Swiss-Prot
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-35
Identity = 94/235 (40.00%), Postives = 127/235 (54.04%), Query Frame = 1 

Query: 5   WKPMV----EISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 64
           W+P      EI+P+CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 65  GCRKNRLVYANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFC-----EFSMQE-C 124
           GCRK+R   ++  N    T  T  + N  G  P S+   +V   NF      E  +QE C
Sbjct: 73  GCRKSRRPKSSSGN-NTKTSLTANSGNPGGGSP-SIDLALV-YANFLNPKPDESILQENC 132

Query: 125 GLGANDYQVGG-------GCFGLEESSNNNESQVAGRE--------LQLPPLPGEDMVE- 184
            L   D+ V           + ++ +  +++  +   E          LPP PGE+++  
Sbjct: 133 DLATTDFLVDNPTGTSMDPSWSMDINDGHHDHYINPVEHIVEECGYNGLPPFPGEELLSL 192

Query: 185 ----AWGNSMIMVNNHHRLQPTRVEMFEDP------------NLLSGNWSPIDLS 198
                W +++++ +NH  +  T V+   +P            NLL G+WSP D +
Sbjct: 193 DTNGVWSDALLIGHNHVDVGVTPVQAVHEPVVHFADESNDSTNLLFGSWSPFDFT 244

[Close]
BLAST of Cucsa.241900 vs. Swiss-Prot
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 9.6e-27
Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 1 

Query: 2   ERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGG 61
           ER  +P  + + NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRN+PVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 62  CRKNRLVY---ANFVNQKPDTPETIPTSNAAGH----FPVSVQSRVVGCGNFCEFSMQEC 118
            RKN+  +   ++  N   D+ +     + + H      +S Q        F E + Q+ 
Sbjct: 102 SRKNKRSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDL 161

[Close]
BLAST of Cucsa.241900 vs. Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26
Identity = 56/104 (53.85%), Postives = 66/104 (63.46%), Query Frame = 1 

Query: 10  EISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRLVY 69
           E++  CPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTKGG+LRN+PVGGGCRKN+   
Sbjct: 52  ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111

Query: 70  ANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQE 114
           ++       TPE           P S   +V     F  +S  E
Sbjct: 112 SSAARSLRTTPE-----------PASHDGKVFSAAGFNGYSNNE 144

[Close]
BLAST of Cucsa.241900 vs. Swiss-Prot
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.1e-26
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 1 

Query: 12 SPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRK 65
          +P CPRC SSNTKFCYYNNYSL+QPRYFCKGCRRYWTKGGSLRN+PVGGGCRK
Sbjct: 37 APACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRK 89

[Close]
BLAST of Cucsa.241900 vs. Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 8.1e-26
Identity = 65/137 (47.45%), Postives = 81/137 (59.12%), Query Frame = 1 

Query: 15  CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRLVYANFVN 74
           CPRC SSNTKFCYYNNY+LTQPR+FCKGCRRYWT+GG+LRNVPVGGGCR+N     N  N
Sbjct: 79  CPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKN-GN 138

Query: 75  QKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGGCFGLEESS 134
            K  +  +  +S+     P S Q R     +   FS     L     Q+GG    L  ++
Sbjct: 139 LKSSSSSSKQSSSVNAQSPSSGQLRT---NHQFPFSPTLYNL----TQLGGIGLNLAATN 198

Query: 135 NNNESQVAGRELQLPPL 152
            NN++   G  L +  L
Sbjct: 199 GNNQAHQIGSSLMMSDL 207

[Close]
BLAST of Cucsa.241900 vs. TrEMBL
Match: A0A0A0LGT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782640 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.9e-80
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 1 

Query: 67  LVYANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGG 126
           +VYANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGG
Sbjct: 111 VVYANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGG 170

Query: 127 CFGLEESSNNNESQVAGRELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNL 186
           CFGLEESSNNNESQVA RELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNL
Sbjct: 171 CFGLEESSNNNESQVAARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNL 230

Query: 187 LSGNWSPIDLSNYDTFSKGLTNIHI 212
           LSGNWSPIDLSNYDTFSKGLTNIHI
Sbjct: 231 LSGNWSPIDLSNYDTFSKGLTNIHI 255

[Close]
BLAST of Cucsa.241900 vs. TrEMBL
Match: A0A0A0LGT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782640 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.7e-35
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
          MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1  MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61 GCRKNR 67
          GCRKNR
Sbjct: 61 GCRKNR 66


HSP 2 Score: 180.6 bits (457), Expect = 1.9e-42
Identity = 107/243 (44.03%), Postives = 133/243 (54.73%), Query Frame = 1 

Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           ME GWK   EISP+CPRCGSSNTKFCY+NNYSLTQPRYFCKGCRRYWT+GGSLRNVPVGG
Sbjct: 1   METGWKEHAEISPSCPRCGSSNTKFCYHNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 60

Query: 61  GCRKNR--------------------------LVYANFVNQKPDTPETIPTSNAAGHFPV 120
           GCRKNR                          LVYA F+N + D+ +    +  AG   +
Sbjct: 61  GCRKNRRGKSMRLSTDSSSSSMIPDGSHIDLALVYAKFLNPQQDSKK----NGLAGSLTI 120

Query: 121 SVQSRVVGCGNFCEFSMQECGLGANDYQVGGGCFGLEESSNNNESQVAGRE--------L 180
           S  S  V              L  ND+ +    + L+ +  + + Q   ++         
Sbjct: 121 SDFSTGV-------------PLSDNDHLM--YYYSLDSAHKHQDHQDRTQQCTSHETSSF 180

Query: 181 QLPPLPGEDMVE---AWGNSMIMVNNHHRLQPTRV--EMFEDPNLLSGNWSPIDLSNYDT 205
            LPPLPG+D V     W NS +M N+   + P  V     +DPNLL GNWSP D+S+ DT
Sbjct: 181 HLPPLPGQDTVSQDILWSNSHMMDNHSLEMSPQPVLGPDTQDPNLLFGNWSPFDMSSDDT 224

[Close]
BLAST of Cucsa.241900 vs. TrEMBL
Match: V7D0D2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G196100g PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.8e-39
Identity = 110/269 (40.89%), Postives = 136/269 (50.56%), Query Frame = 1 

Query: 1   MERGWKP-MVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVG 60
           MERGWK   VEISPNCPRC  SNTKFCYYNNYS TQPRYFCKGCRRYWTKGGSLRNVP+G
Sbjct: 1   MERGWKANSVEISPNCPRCSCSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIG 60

Query: 61  GGCRKNRL------------------------------------VYANFVNQKPDTPETI 120
           GGCRK+R                                     VYA+F+N KPD  +T 
Sbjct: 61  GGCRKSRRGRYNKTLRQANSPVGHSDLRPSSSVMSDGPNIDIAQVYASFLNVKPDQVQTF 120

Query: 121 PTSNAA---------GHFPVSVQSRVVGCGNFCE----------FSMQECGLGANDYQVG 180
            + +           GH  +S +  + G  +F E            M  CGL +      
Sbjct: 121 CSPSPEYSSIINTDFGHSALSEEHGLTGRLHFHEQPTESYFSEDIGMYFCGLNSIQKH-- 180

Query: 181 GGCFGLEESSNNNESQVAGRELQLPPLPGEDMVEA-----WGNSMIMVNNHHRLQPTRVE 204
                 +E S+++++ V     +LPPLPGED   +     W NS +MV+  H LQ T+  
Sbjct: 181 ------KEYSSSHDTTVTKTNFELPPLPGEDAETSHGNVLWSNSEMMVD--HGLQATQWP 240

[Close]
BLAST of Cucsa.241900 vs. TrEMBL
Match: A0A0D2MF28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G234700 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-38
Identity = 106/250 (42.40%), Postives = 130/250 (52.00%), Query Frame = 1 

Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           MERGWKP +EISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1   MERGWKPRMEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRLVYANFVNQKPDTPETIPTS-NAAGHFPVSVQSR---VVGCGNFCEFSMQECGL 120
           GCRKNR      +    D  +T   S ++  H   S +S     +  G+  + ++     
Sbjct: 61  GCRKNR--RGKSLRLPTDGAQTKSLSCDSFRHSYASTESNSSSSMSDGSHIDLALVYANF 120

Query: 121 GANDYQVGGGCF-----------GLEESSNNNESQVAGRELQ------------------ 180
            +N        F            LE S   N +  +  +L                   
Sbjct: 121 LSNQQPENKSGFVVPELRTEFDPSLEFSRILNTNMASSIQLPEENGLDLSTENHLSNNGQ 180

Query: 181 ---------LPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFE----DPNLLSGNWSPI 205
                    LPPLPG+D+   W NS   ++    LQ T+  + E    DPN L GNW+P 
Sbjct: 181 IYCSGGNHGLPPLPGDDL--PWPNSQSTMS--PSLQATQEPVLEPETHDPNQLFGNWNPF 240

[Close]
BLAST of Cucsa.241900 vs. TrEMBL
Match: A0A0S3RZC2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G353900 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.1e-36
Identity = 107/271 (39.48%), Postives = 135/271 (49.82%), Query Frame = 1 

Query: 1   MERGWKP-MVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVG 60
           MERGWK   VEISPNCPRCGSSNTKFCYYNNYS TQPRYFCKGCRRYWTKGGSLRNVP+G
Sbjct: 1   MERGWKANSVEISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIG 60

Query: 61  GGCRKNRL-------------------------------------VYANFVNQKPDTPET 120
           GGCRK+R                                      VYA+F+N KPD  +T
Sbjct: 61  GGCRKSRRGKYNKALRQAHGPVGHSDDLRPSSSVVSDGPNIDLAQVYASFLNVKPDQVQT 120

Query: 121 IPTSNAA---------GHFPVSVQSR-VVGCGNFCE----------FSMQECGLGANDYQ 180
           + + +           GH  +S +   + G  +F E            M  CGL +    
Sbjct: 121 VCSPSPEYSSIVNTDFGHSVLSEEHHGLTGRLHFHEQPRESHFGEDIEMYFCGLNSIQKH 180

Query: 181 VGGGCFGLEESSNNNESQVAGRELQLPPLPGEDMVEA-----WGNSMIMVNNHHRLQPTR 204
                   ++ S+++++ V     +LPPLPGE    +     W NS +MV+  H LQ T+
Sbjct: 181 --------QKYSSSHDTTVTKTNFELPPLPGEVAETSHGNVLWSNSEMMVD--HALQATQ 240

[Close]
BLAST of Cucsa.241900 vs. TAIR10
Match: AT3G52440.1 (AT3G52440.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 94/235 (40.00%), Postives = 127/235 (54.04%), Query Frame = 1 

Query: 5   WKPMV----EISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 64
           W+P      EI+P+CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 65  GCRKNRLVYANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFC-----EFSMQE-C 124
           GCRK+R   ++  N    T  T  + N  G  P S+   +V   NF      E  +QE C
Sbjct: 73  GCRKSRRPKSSSGN-NTKTSLTANSGNPGGGSP-SIDLALV-YANFLNPKPDESILQENC 132

Query: 125 GLGANDYQVGG-------GCFGLEESSNNNESQVAGRE--------LQLPPLPGEDMVE- 184
            L   D+ V           + ++ +  +++  +   E          LPP PGE+++  
Sbjct: 133 DLATTDFLVDNPTGTSMDPSWSMDINDGHHDHYINPVEHIVEECGYNGLPPFPGEELLSL 192

Query: 185 ----AWGNSMIMVNNHHRLQPTRVEMFEDP------------NLLSGNWSPIDLS 198
                W +++++ +NH  +  T V+   +P            NLL G+WSP D +
Sbjct: 193 DTNGVWSDALLIGHNHVDVGVTPVQAVHEPVVHFADESNDSTNLLFGSWSPFDFT 244

[Close]
BLAST of Cucsa.241900 vs. TAIR10
Match: AT4G24060.1 (AT4G24060.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 121.7 bits (304), Expect = 5.4e-28
Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 1 

Query: 2   ERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGG 61
           ER  +P  + + NCPRC S+NTKFCYYNNYSLTQPRYFCKGCRRYWT+GGSLRN+PVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 62  CRKNRLVY---ANFVNQKPDTPETIPTSNAAGH----FPVSVQSRVVGCGNFCEFSMQEC 118
            RKN+  +   ++  N   D+ +     + + H      +S Q        F E + Q+ 
Sbjct: 102 SRKNKRSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDL 161

[Close]
BLAST of Cucsa.241900 vs. TAIR10
Match: AT5G60200.1 (AT5G60200.1 TARGET OF MONOPTEROS 6)

HSP 1 Score: 120.9 bits (302), Expect = 9.2e-28
Identity = 56/104 (53.85%), Postives = 66/104 (63.46%), Query Frame = 1 

Query: 10  EISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRLVY 69
           E++  CPRC S+NTKFCYYNNYSLTQPRYFCK CRRYWTKGG+LRN+PVGGGCRKN+   
Sbjct: 52  ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111

Query: 70  ANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQE 114
           ++       TPE           P S   +V     F  +S  E
Sbjct: 112 SSAARSLRTTPE-----------PASHDGKVFSAAGFNGYSNNE 144

[Close]
BLAST of Cucsa.241900 vs. TAIR10
Match: AT1G21340.1 (AT1G21340.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 118.6 bits (296), Expect = 4.6e-27
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 1 

Query: 12 SPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRK 65
          +P CPRC SSNTKFCYYNNYSL+QPRYFCKGCRRYWTKGGSLRN+PVGGGCRK
Sbjct: 37 APACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRK 89

[Close]
BLAST of Cucsa.241900 vs. TAIR10
Match: AT1G07640.3 (AT1G07640.3 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 118.6 bits (296), Expect = 4.6e-27
Identity = 65/137 (47.45%), Postives = 81/137 (59.12%), Query Frame = 1 

Query: 15  CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRLVYANFVN 74
           CPRC SSNTKFCYYNNY+LTQPR+FCKGCRRYWT+GG+LRNVPVGGGCR+N     N  N
Sbjct: 87  CPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKN-GN 146

Query: 75  QKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGGCFGLEESS 134
            K  +  +  +S+     P S Q R     +   FS     L     Q+GG    L  ++
Sbjct: 147 LKSSSSSSKQSSSVNAQSPSSGQLRT---NHQFPFSPTLYNL----TQLGGIGLNLAATN 206

Query: 135 NNNESQVAGRELQLPPL 152
            NN++   G  L +  L
Sbjct: 207 GNNQAHQIGSSLMMSDL 215

[Close]
BLAST of Cucsa.241900 vs. NCBI nr
Match: gi|449437870|ref|XP_004136713.1| (PREDICTED: dof zinc finger protein DOF3.5 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.3e-79
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 1 

Query: 67  LVYANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGG 126
           +VYANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGG
Sbjct: 111 VVYANFVNQKPDTPETIPTSNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQVGGG 170

Query: 127 CFGLEESSNNNESQVAGRELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNL 186
           CFGLEESSNNNESQVA RELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNL
Sbjct: 171 CFGLEESSNNNESQVAARELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFEDPNL 230

Query: 187 LSGNWSPIDLSNYDTFSKGLTNIHI 212
           LSGNWSPIDLSNYDTFSKGLTNIHI
Sbjct: 231 LSGNWSPIDLSNYDTFSKGLTNIHI 255

[Close]
BLAST of Cucsa.241900 vs. NCBI nr
Match: gi|449437870|ref|XP_004136713.1| (PREDICTED: dof zinc finger protein DOF3.5 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 1.3e-34
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
          MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1  MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61 GCRKNR 67
          GCRKNR
Sbjct: 61 GCRKNR 66


HSP 2 Score: 275.8 bits (704), Expect = 6.4e-71
Identity = 134/154 (87.01%), Postives = 141/154 (91.56%), Query Frame = 1 

Query: 67  LVYANFVNQKPDTPETIPT----SNAAGHFPVSVQSRVVGCGNFCEFSMQECGLGANDYQ 126
           +VYANFVNQKPDT ETIPT    SNAAGHFPVS +S VVGCGNFCEFSMQECGLGA+DYQ
Sbjct: 111 VVYANFVNQKPDTRETIPTTNTTSNAAGHFPVSGESGVVGCGNFCEFSMQECGLGASDYQ 170

Query: 127 VGGGCFGLEESSNNNESQV-----AGRELQLPPLPGEDMVEAWGNSMIMVNNHHRLQPTR 186
           VGGGCFGLEES+NNNE+QV     A RELQLPPLPGED+VEAWGNSMIMVNNHHRLQPTR
Sbjct: 171 VGGGCFGLEESNNNNENQVDNIEVAARELQLPPLPGEDVVEAWGNSMIMVNNHHRLQPTR 230

Query: 187 VEMFEDPNLLSGNWSPIDLSNYDTFSKGLTNIHI 212
           VEMFEDPNLLSGNWSPIDLSNYDTFSKGLTN+HI
Sbjct: 231 VEMFEDPNLLSGNWSPIDLSNYDTFSKGLTNMHI 264

[Close]
BLAST of Cucsa.241900 vs. NCBI nr
Match: gi|659085778|ref|XP_008443597.1| (PREDICTED: dof zinc finger protein DOF3.5 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 1.3e-34
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
          MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1  MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61 GCRKNR 67
          GCRKNR
Sbjct: 61 GCRKNR 66


HSP 2 Score: 180.6 bits (457), Expect = 2.8e-42
Identity = 107/243 (44.03%), Postives = 133/243 (54.73%), Query Frame = 1 

Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           ME GWK   EISP+CPRCGSSNTKFCY+NNYSLTQPRYFCKGCRRYWT+GGSLRNVPVGG
Sbjct: 1   METGWKEHAEISPSCPRCGSSNTKFCYHNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 60

Query: 61  GCRKNR--------------------------LVYANFVNQKPDTPETIPTSNAAGHFPV 120
           GCRKNR                          LVYA F+N + D+ +    +  AG   +
Sbjct: 61  GCRKNRRGKSMRLSTDSSSSSMIPDGSHIDLALVYAKFLNPQQDSKK----NGLAGSLTI 120

Query: 121 SVQSRVVGCGNFCEFSMQECGLGANDYQVGGGCFGLEESSNNNESQVAGRE--------L 180
           S  S  V              L  ND+ +    + L+ +  + + Q   ++         
Sbjct: 121 SDFSTGV-------------PLSDNDHLM--YYYSLDSAHKHQDHQDRTQQCTSHETSSF 180

Query: 181 QLPPLPGEDMVE---AWGNSMIMVNNHHRLQPTRV--EMFEDPNLLSGNWSPIDLSNYDT 205
            LPPLPG+D V     W NS +M N+   + P  V     +DPNLL GNWSP D+S+ DT
Sbjct: 181 HLPPLPGQDTVSQDILWSNSHMMDNHSLEMSPQPVLGPDTQDPNLLFGNWSPFDMSSDDT 224

[Close]
BLAST of Cucsa.241900 vs. NCBI nr
Match: gi|593799877|ref|XP_007162976.1| (hypothetical protein PHAVU_001G196100g [Phaseolus vulgaris])

HSP 1 Score: 169.1 bits (427), Expect = 8.4e-39
Identity = 110/269 (40.89%), Postives = 136/269 (50.56%), Query Frame = 1 

Query: 1   MERGWKP-MVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVG 60
           MERGWK   VEISPNCPRC  SNTKFCYYNNYS TQPRYFCKGCRRYWTKGGSLRNVP+G
Sbjct: 1   MERGWKANSVEISPNCPRCSCSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIG 60

Query: 61  GGCRKNRL------------------------------------VYANFVNQKPDTPETI 120
           GGCRK+R                                     VYA+F+N KPD  +T 
Sbjct: 61  GGCRKSRRGRYNKTLRQANSPVGHSDLRPSSSVMSDGPNIDIAQVYASFLNVKPDQVQTF 120

Query: 121 PTSNAA---------GHFPVSVQSRVVGCGNFCE----------FSMQECGLGANDYQVG 180
            + +           GH  +S +  + G  +F E            M  CGL +      
Sbjct: 121 CSPSPEYSSIINTDFGHSALSEEHGLTGRLHFHEQPTESYFSEDIGMYFCGLNSIQKH-- 180

Query: 181 GGCFGLEESSNNNESQVAGRELQLPPLPGEDMVEA-----WGNSMIMVNNHHRLQPTRVE 204
                 +E S+++++ V     +LPPLPGED   +     W NS +MV+  H LQ T+  
Sbjct: 181 ------KEYSSSHDTTVTKTNFELPPLPGEDAETSHGNVLWSNSEMMVD--HGLQATQWP 240

[Close]
BLAST of Cucsa.241900 vs. NCBI nr
Match: gi|823136705|ref|XP_012468121.1| (PREDICTED: dof zinc finger protein DOF3.5-like [Gossypium raimondii])

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38
Identity = 106/250 (42.40%), Postives = 130/250 (52.00%), Query Frame = 1 

Query: 1   MERGWKPMVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60
           MERGWKP +EISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG
Sbjct: 1   MERGWKPRMEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 60

Query: 61  GCRKNRLVYANFVNQKPDTPETIPTS-NAAGHFPVSVQSR---VVGCGNFCEFSMQECGL 120
           GCRKNR      +    D  +T   S ++  H   S +S     +  G+  + ++     
Sbjct: 61  GCRKNR--RGKSLRLPTDGAQTKSLSCDSFRHSYASTESNSSSSMSDGSHIDLALVYANF 120

Query: 121 GANDYQVGGGCF-----------GLEESSNNNESQVAGRELQ------------------ 180
            +N        F            LE S   N +  +  +L                   
Sbjct: 121 LSNQQPENKSGFVVPELRTEFDPSLEFSRILNTNMASSIQLPEENGLDLSTENHLSNNGQ 180

Query: 181 ---------LPPLPGEDMVEAWGNSMIMVNNHHRLQPTRVEMFE----DPNLLSGNWSPI 205
                    LPPLPG+D+   W NS   ++    LQ T+  + E    DPN L GNW+P 
Sbjct: 181 IYCSGGNHGLPPLPGDDL--PWPNSQSTMS--PSLQATQEPVLEPETHDPNQLFGNWNPF 240

The following BLAST results are available for this feature:
BLAST of Cucsa.241900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF35_ARATH1.9e-3540.00Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1[more]
DOF46_ARATH9.6e-2748.78Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2[more]
DOF53_ARATH1.6e-2653.85Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1[more]
DOF12_ARATH8.1e-2690.57Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1[more]
DOF11_ARATH8.1e-2647.45Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2[more]
BLAST of Cucsa.241900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGT7_CUCSA8.9e-8098.62Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782640 PE=4 SV=1[more]
A0A0A0LGT7_CUCSA8.7e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G782640 PE=4 SV=1[more]
V7D0D2_PHAVU5.8e-3940.89Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G196100g PE=4 SV=1[more]
A0A0D2MF28_GOSRA1.3e-3842.40Uncharacterized protein OS=Gossypium raimondii GN=B456_002G234700 PE=4 SV=1[more]
A0A0S3RZC2_PHAAN6.1e-3639.48Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G353900 PE=... [more]
BLAST of Cucsa.241900 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G52440.11.1e-3640.00 Dof-type zinc finger DNA-binding family protein[more]
AT4G24060.15.4e-2848.78 Dof-type zinc finger DNA-binding family protein[more]
AT5G60200.19.2e-2853.85 TARGET OF MONOPTEROS 6[more]
AT1G21340.14.6e-2790.57 Dof-type zinc finger DNA-binding family protein[more]
AT1G07640.34.6e-2747.45 Dof-type zinc finger DNA-binding family protein[more]
BLAST of Cucsa.241900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437870|ref|XP_004136713.1|1.3e-7998.62PREDICTED: dof zinc finger protein DOF3.5 [Cucumis sativus][more]
gi|449437870|ref|XP_004136713.1|1.3e-34100.00PREDICTED: dof zinc finger protein DOF3.5 [Cucumis sativus][more]
gi|659085778|ref|XP_008443597.1|1.3e-34100.00PREDICTED: dof zinc finger protein DOF3.5 [Cucumis melo][more]
gi|593799877|ref|XP_007162976.1|8.4e-3940.89hypothetical protein PHAVU_001G196100g [Phaseolus vulgaris][more]
gi|823136705|ref|XP_012468121.1|1.9e-3842.40PREDICTED: dof zinc finger protein DOF3.5-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.241900.1Cucsa.241900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 1..66
score: 2.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 13..66
score: 6.1
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 15..51
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 13..67
score: 28
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 1..66
score: 3.3
NoneNo IPR availablePANTHERPTHR31992:SF8DOF ZINC FINGER PROTEIN DOF1.1-RELATEDcoord: 1..66
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.241900Cla017622Watermelon (97103) v1cgywmB456
Cucsa.241900Csa3G782640Cucumber (Chinese Long) v2cgycuB344
Cucsa.241900MELO3C009544Melon (DHL92) v3.5.1cgymeB412
Cucsa.241900ClCG10G018290Watermelon (Charleston Gray)cgywcgB426
Cucsa.241900CSPI03G35660Wild cucumber (PI 183967)cgycpiB360
Cucsa.241900CmaCh14G003630Cucurbita maxima (Rimu)cgycmaB0674
Cucsa.241900CmaCh06G005280Cucurbita maxima (Rimu)cgycmaB0681
Cucsa.241900CmoCh14G003590Cucurbita moschata (Rifu)cgycmoB0675
Cucsa.241900CmoCh06G005270Cucurbita moschata (Rifu)cgycmoB0681
Cucsa.241900Lsi03G018150Bottle gourd (USVL1VR-Ls)cgylsiB402
Cucsa.241900Cp4.1LG03g00340Cucurbita pepo (Zucchini)cgycpeB0644
Cucsa.241900Cp4.1LG08g09560Cucurbita pepo (Zucchini)cgycpeB0650
Cucsa.241900MELO3C009544.2Melon (DHL92) v3.6.1cgymedB408
Cucsa.241900CsaV3_3G038020Cucumber (Chinese Long) v3cgycucB363
Cucsa.241900Cla97C10G201260Watermelon (97103) v2cgywmbB425
Cucsa.241900Bhi11G001981Wax gourdcgywgoB484
Cucsa.241900Carg03624Silver-seed gourdcarcgyB0294
Cucsa.241900Carg16217Silver-seed gourdcarcgyB0758
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.241900Cucumber (Chinese Long) v2cgycuB347
Cucsa.241900Melon (DHL92) v3.5.1cgymeB414
Cucsa.241900Melon (DHL92) v3.5.1cgymeB415
Cucsa.241900Watermelon (Charleston Gray)cgywcgB428
Cucsa.241900Watermelon (97103) v1cgywmB458
Cucsa.241900Cucurbita pepo (Zucchini)cgycpeB0640
Cucsa.241900Cucurbita pepo (Zucchini)cgycpeB0643
Cucsa.241900Bottle gourd (USVL1VR-Ls)cgylsiB395
Cucsa.241900Bottle gourd (USVL1VR-Ls)cgylsiB398
Cucsa.241900Melon (DHL92) v3.6.1cgymedB409
Cucsa.241900Melon (DHL92) v3.6.1cgymedB410
Cucsa.241900Silver-seed gourdcarcgyB0282
Cucsa.241900Silver-seed gourdcarcgyB0481
Cucsa.241900Silver-seed gourdcarcgyB0923
Cucsa.241900Cucumber (Chinese Long) v3cgycucB365
Cucsa.241900Cucumber (Chinese Long) v3cgycucB366
Cucsa.241900Watermelon (97103) v2cgywmbB427
Cucsa.241900Wax gourdcgywgoB489
Cucsa.241900Wax gourdcgywgoB487
Cucsa.241900Cucumber (Gy14) v1cgycgyB027
Cucsa.241900Cucurbita maxima (Rimu)cgycmaB0683
Cucsa.241900Cucurbita maxima (Rimu)cgycmaB0678
Cucsa.241900Cucurbita maxima (Rimu)cgycmaB0680
Cucsa.241900Cucurbita moschata (Rifu)cgycmoB0680
Cucsa.241900Cucurbita moschata (Rifu)cgycmoB0683
Cucsa.241900Wild cucumber (PI 183967)cgycpiB363