Cucsa.234180 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTAAACAGCTAACAAAATTTTGTTGACTAGTCATCAAAGTTAAGTCTTTATCTAAATATAGTTGAGATTCAACATTTTTtGTTTTAAAAAGTTGATATGTTATATATTAATATTTCATAGCTGTATCCACCAAAAACATAGTGATTACTATTTTGCTTCAAGATTAAATTTACTTATATATCCTCTTCTTCATCTTCTTCTCTCTCTCTGATTTAGAGAAAGCTTAATGATGGTGAAGTTATATCATAATTGCAGATTGATTCATTATTTCTTCCTGTTTCTAAGTTTTTTtGGAGTTTCAATGTGTGAAGTCTTTGTTGTTGGAGATGAAGATGGCTGGAATTCTGGCACCAATTTTGCTACTTGGTCTCAATCCCATAATTTCACCAAAGGAGATTTTCTAGGTATTCATCACCAATTTCCCTCTCAACTATTTTCTTTGGATTCAAATTGTTCCTCTTTCCTTATAAGGCTCGTGTTGAAAACGAGCAGTTTTAAACTTTTTGATCTTGTTGTCGATAGTACTTTCTTATTCTATTTAAGTTAGTTAGCGTATCTAAATAGTTATCTTACAATATATTTAAGTACTAGCCGCTTAATCTCTTTCATTAACACTACAACTAAGATTGGTTGGTTTTGATTTTGTAGTTTTCAATTATGCAAAGAATGTACACAATGTGTATGAAGTTATTGAAGAGACATATAGATCTTGTGAGGCAAAGAATGGAGTATTGGGTGAATATGATAGTGGAAATGATAAAATTGAACTCAAAGAAGCAAGAAATTATTGGTTCATTTGTAATGTGGCTGGTCATTGCTTGGGTGGAATGAGGTTCGGAATTGTGGTTAAAGAATCCAATTCTTCTACTCATCTTCCACTTAATCCAATTGATCAATCTCCTCCTCCAAACACCAACCATGCTTCTATTTGTTGTGGAAGGTTTCCTATGTGGTGGACCTTTTTCATTTGCATTCTATCCTTTAATGTTCTATTTTATTGATATCTGATGTTCGGGTTAAGTCTTGTTTGGTAATTATTTAGTTGTTGTTT TTTTTTAAACAGCTAACAAAATTTTGTTGACTAGTCATCAAAGTTAAGTCTTTATCTAAATATAGTTGAGATTCAACATTTTTTGTTTTAAAAAGTTGATATGTTATATATTAATATTTCATAGCTGTATCCACCAAAAACATAGTGATTACTATTTTGCTTCAAGATTAAATTTACTTATATATCCTCTTCTTCATCTTCTTCTCTCTCTCTGATTTAGAGAAAGCTTAATGATGGTGAAGTTATATCATAATTGCAGATTGATTCATTATTTCTTCCTGTTTCTAAGTTTTTTTGGAGTTTCAATGTGTGAAGTCTTTGTTGTTGGAGATGAAGATGGCTGGAATTCTGGCACCAATTTTGCTACTTGGTCTCAATCCCATAATTTCACCAAAGGAGATTTTCTAGTTTTCAATTATGCAAAGAATGTACACAATGTGTATGAAGTTATTGAAGAGACATATAGATCTTGTGAGGCAAAGAATGGAGTATTGGGTGAATATGATAGTGGAAATGATAAAATTGAACTCAAAGAAGCAAGAAATTATTGGTTCATTTGTAATGTGGCTGGTCATTGCTTGGGTGGAATGAGGTTCGGAATTGTGGTTAAAGAATCCAATTCTTCTACTCATCTTCCACTTAATCCAATTGATCAATCTCCTCCTCCAAACACCAACCATGCTTCTATTTGTTGTGGAAGGTTTCCTATGTGGTGGACCTTTTTCATTTGCATTCTATCCTTTAATGTTCTATTTTATTGATATCTGATGTTCGGGTTAAGTCttgtttggtaattatttagttgttgttt ATGATGGTGAAGTTATATCATAATTGCAGATTGATTCATTATTTCTTCCTGTTTCTAAGTTTTTTtGGAGTTTCAATGTGTGAAGTCTTTGTTGTTGGAGATGAAGATGGCTGGAATTCTGGCACCAATTTTGCTACTTGGTCTCAATCCCATAATTTCACCAAAGGAGATTTTCTAGTTTTCAATTATGCAAAGAATGTACACAATGTGTATGAAGTTATTGAAGAGACATATAGATCTTGTGAGGCAAAGAATGGAGTATTGGGTGAATATGATAGTGGAAATGATAAAATTGAACTCAAAGAAGCAAGAAATTATTGGTTCATTTGTAATGTGGCTGGTCATTGCTTGGGTGGAATGAGGTTCGGAATTGTGGTTAAAGAATCCAATTCTTCTACTCATCTTCCACTTAATCCAATTGATCAATCTCCTCCTCCAAACACCAACCATGCTTCTATTTGTTGTGGAAGGTTTCCTATGTGGTGGACCTTTTTCATTTGCATTCTATCCTTTAATGTTCTATTTTATTGA MMVKLYHNCRLIHYFFLFLSFFGVSMCEVFVVGDEDGWNSGTNFATWSQSHNFTKGDFLVFNYAKNVHNVYEVIEETYRSCEAKNGVLGEYDSGNDKIELKEARNYWFICNVAGHCLGGMRFGIVVKESNSSTHLPLNPIDQSPPPNTNHASICCGRFPMWWTFFICILSFNVLFY*
BLAST of Cucsa.234180 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.1e-19 Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = 1
BLAST of Cucsa.234180 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.6e-14 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
BLAST of Cucsa.234180 vs. Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.6e-12 Identity = 37/96 (38.54%), Postives = 52/96 (54.17%), Query Frame = 1
BLAST of Cucsa.234180 vs. Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11 Identity = 44/137 (32.12%), Postives = 61/137 (44.53%), Query Frame = 1
BLAST of Cucsa.234180 vs. Swiss-Prot
Match: NO16_MEDTR (Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11 Identity = 47/153 (30.72%), Postives = 71/153 (46.41%), Query Frame = 1
BLAST of Cucsa.234180 vs. TrEMBL
Match: A0A0A0LME3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270850 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 2.6e-88 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of Cucsa.234180 vs. TrEMBL
Match: B9HR46_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s13850g PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 5.8e-40 Identity = 83/164 (50.61%), Postives = 106/164 (64.63%), Query Frame = 1
BLAST of Cucsa.234180 vs. TrEMBL
Match: B9S5L2_RICCO (Blue copper protein, putative OS=Ricinus communis GN=RCOM_0978090 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.4e-38 Identity = 84/184 (45.65%), Postives = 114/184 (61.96%), Query Frame = 1
BLAST of Cucsa.234180 vs. TrEMBL
Match: I3RZA8_MEDTR (Blue copper-like protein OS=Medicago truncatula GN=MTR_1g112700 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 6.0e-37 Identity = 79/155 (50.97%), Postives = 106/155 (68.39%), Query Frame = 1
BLAST of Cucsa.234180 vs. TrEMBL
Match: W9S5G2_9ROSA (Blue copper protein OS=Morus notabilis GN=L484_008363 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.7e-36 Identity = 79/175 (45.14%), Postives = 110/175 (62.86%), Query Frame = 1
BLAST of Cucsa.234180 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein) HSP 1 Score: 84.3 bits (207), Expect = 8.0e-17 Identity = 40/96 (41.67%), Postives = 49/96 (51.04%), Query Frame = 1
BLAST of Cucsa.234180 vs. TAIR10
Match: AT5G26330.1 (AT5G26330.1 Cupredoxin superfamily protein) HSP 1 Score: 79.3 bits (194), Expect = 2.6e-15 Identity = 48/140 (34.29%), Postives = 65/140 (46.43%), Query Frame = 1
BLAST of Cucsa.234180 vs. TAIR10
Match: AT2G31050.1 (AT2G31050.1 Cupredoxin superfamily protein) HSP 1 Score: 74.3 bits (181), Expect = 8.3e-14 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 1
BLAST of Cucsa.234180 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13 Identity = 40/123 (32.52%), Postives = 58/123 (47.15%), Query Frame = 1
BLAST of Cucsa.234180 vs. TAIR10
Match: AT3G27200.1 (AT3G27200.1 Cupredoxin superfamily protein) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13 Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 1
BLAST of Cucsa.234180 vs. NCBI nr
Match: gi|449458632|ref|XP_004147051.1| (PREDICTED: mavicyanin-like [Cucumis sativus]) HSP 1 Score: 385.6 bits (989), Expect = 4.8e-104 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of Cucsa.234180 vs. NCBI nr
Match: gi|659115733|ref|XP_008457708.1| (PREDICTED: mavicyanin-like [Cucumis melo]) HSP 1 Score: 352.8 bits (904), Expect = 3.4e-94 Identity = 161/170 (94.71%), Postives = 164/170 (96.47%), Query Frame = 1
BLAST of Cucsa.234180 vs. NCBI nr
Match: gi|700206823|gb|KGN61942.1| (hypothetical protein Csa_2G270850 [Cucumis sativus]) HSP 1 Score: 332.8 bits (852), Expect = 3.7e-88 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of Cucsa.234180 vs. NCBI nr
Match: gi|743792992|ref|XP_011045965.1| (PREDICTED: mavicyanin-like [Populus euphratica]) HSP 1 Score: 173.3 bits (438), Expect = 3.7e-40 Identity = 84/164 (51.22%), Postives = 107/164 (65.24%), Query Frame = 1
BLAST of Cucsa.234180 vs. NCBI nr
Match: gi|224105149|ref|XP_002313702.1| (hypothetical protein POPTR_0009s13850g [Populus trichocarpa]) HSP 1 Score: 172.2 bits (435), Expect = 8.3e-40 Identity = 83/164 (50.61%), Postives = 106/164 (64.63%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |