CSPI02G13650 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACATAGTGATTACTATTTTGCTTCAAGATTAAATTTACTTATATATCCTCTTCTTCATCTTCTTCTCTCTCTCTGATTTAGAGAAAGCTTAATGATGGTGAAGTTATATCATAATTGCAGATTGATTCATTATTTCTTCTTGTTTCTAAGTTTTTTTGGAGTTTCAATGTGTGAAGTCTTTGTTGTTGGAGATGAAGATGGCTGGAATTCTGGCACCAATTTTGCTACTTGGTCTCAATCCCATAATTTCACCAAAGGAGATTTTCTAGGTATTCATCACCAATTTCCCTCTCAACTATTTTCTTTGGATTCAAATTGTTCCTCTTTCCTTATAAGGCTCGTGTTGAAAACGAGCAGTTTTAAACTTTTTGATCTTGTTGTCGATAGTACTTTCTTATTCTATTTAAGTTAGTTAGCGTATCTAAATAGTTATCTTACAATATATTTAAGTACTAGCCGCTTAATCTCTTTCATTAACACTACAACTAAGATTGGTTGGTTTTGATTTTGTAGTTTTCAATTATGCAAAGAATGTACACAATGTGTATGAAGTTATTGAAGAGACATATAGATCTTGTGAGGCAAAGAATGGAGTATTGGGTGAATATGATAGTGGAAATGATAAAATTGAACTCAAAGAAGCAAGAAATTATTGGTTCATTTGTAATGTGGCTGGTCATTGCTTGGGTGGAATGAGGTTCGGAATTGTGGTTAAAGAATCCAATTCTTCTACTCATCTTCCACTTAATCCTATTGATCAATCTCCTCCTCCAAACACCAACCATGCTTCTATTTGTTGTGGAAGGTTTCCTATGTGGTGGACCTTTTTCATTTGCATTCTACCCTTTAATGTTCTATTTTATTGATATCTCATGTTCGGG ATGATGGTGAAGTTATATCATAATTGCAGATTGATTCATTATTTCTTCTTGTTTCTAAGTTTTTTTGGAGTTTCAATGTGTGAAGTCTTTGTTGTTGGAGATGAAGATGGCTGGAATTCTGGCACCAATTTTGCTACTTGGTCTCAATCCCATAATTTCACCAAAGGAGATTTTCTAGTTTTCAATTATGCAAAGAATGTACACAATGTGTATGAAGTTATTGAAGAGACATATAGATCTTGTGAGGCAAAGAATGGAGTATTGGGTGAATATGATAGTGGAAATGATAAAATTGAACTCAAAGAAGCAAGAAATTATTGGTTCATTTGTAATGTGGCTGGTCATTGCTTGGGTGGAATGAGGTTCGGAATTGTGGTTAAAGAATCCAATTCTTCTACTCATCTTCCACTTAATCCTATTGATCAATCTCCTCCTCCAAACACCAACCATGCTTCTATTTGTTGTGGAAGGTTTCCTATGTGGTGGACCTTTTTCATTTGCATTCTACCCTTTAATGTTCTATTTTATTGA ATGATGGTGAAGTTATATCATAATTGCAGATTGATTCATTATTTCTTCTTGTTTCTAAGTTTTTTTGGAGTTTCAATGTGTGAAGTCTTTGTTGTTGGAGATGAAGATGGCTGGAATTCTGGCACCAATTTTGCTACTTGGTCTCAATCCCATAATTTCACCAAAGGAGATTTTCTAGTTTTCAATTATGCAAAGAATGTACACAATGTGTATGAAGTTATTGAAGAGACATATAGATCTTGTGAGGCAAAGAATGGAGTATTGGGTGAATATGATAGTGGAAATGATAAAATTGAACTCAAAGAAGCAAGAAATTATTGGTTCATTTGTAATGTGGCTGGTCATTGCTTGGGTGGAATGAGGTTCGGAATTGTGGTTAAAGAATCCAATTCTTCTACTCATCTTCCACTTAATCCTATTGATCAATCTCCTCCTCCAAACACCAACCATGCTTCTATTTGTTGTGGAAGGTTTCCTATGTGGTGGACCTTTTTCATTTGCATTCTACCCTTTAATGTTCTATTTTATTGA
BLAST of CSPI02G13650 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.4e-18 Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = 1
BLAST of CSPI02G13650 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.6e-14 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1
BLAST of CSPI02G13650 vs. Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 7.3e-12 Identity = 37/96 (38.54%), Postives = 52/96 (54.17%), Query Frame = 1
BLAST of CSPI02G13650 vs. Swiss-Prot
Match: NO16_MEDTR (Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.8e-11 Identity = 47/153 (30.72%), Postives = 71/153 (46.41%), Query Frame = 1
BLAST of CSPI02G13650 vs. Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 4.7e-11 Identity = 44/137 (32.12%), Postives = 61/137 (44.53%), Query Frame = 1
BLAST of CSPI02G13650 vs. TrEMBL
Match: A0A0A0LME3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270850 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.2e-87 Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 1
BLAST of CSPI02G13650 vs. TrEMBL
Match: B9HR46_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s13850g PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 8.3e-39 Identity = 83/164 (50.61%), Postives = 105/164 (64.02%), Query Frame = 1
BLAST of CSPI02G13650 vs. TrEMBL
Match: B9S5L2_RICCO (Blue copper protein, putative OS=Ricinus communis GN=RCOM_0978090 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-36 Identity = 84/184 (45.65%), Postives = 113/184 (61.41%), Query Frame = 1
BLAST of CSPI02G13650 vs. TrEMBL
Match: K7LLY0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G281900 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.0e-36 Identity = 78/172 (45.35%), Postives = 109/172 (63.37%), Query Frame = 1
BLAST of CSPI02G13650 vs. TrEMBL
Match: I3RZA8_MEDTR (Blue copper-like protein OS=Medicago truncatula GN=MTR_1g112700 PE=2 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 6.6e-36 Identity = 79/155 (50.97%), Postives = 106/155 (68.39%), Query Frame = 1
BLAST of CSPI02G13650 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein) HSP 1 Score: 84.3 bits (207), Expect = 8.0e-17 Identity = 40/96 (41.67%), Postives = 49/96 (51.04%), Query Frame = 1
BLAST of CSPI02G13650 vs. TAIR10
Match: AT5G26330.1 (AT5G26330.1 Cupredoxin superfamily protein) HSP 1 Score: 79.7 bits (195), Expect = 2.0e-15 Identity = 48/140 (34.29%), Postives = 65/140 (46.43%), Query Frame = 1
BLAST of CSPI02G13650 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13 Identity = 40/123 (32.52%), Postives = 58/123 (47.15%), Query Frame = 1
BLAST of CSPI02G13650 vs. TAIR10
Match: AT2G31050.1 (AT2G31050.1 Cupredoxin superfamily protein) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 1
BLAST of CSPI02G13650 vs. TAIR10
Match: AT3G27200.1 (AT3G27200.1 Cupredoxin superfamily protein) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13 Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 1
BLAST of CSPI02G13650 vs. NCBI nr
Match: gi|449458632|ref|XP_004147051.1| (PREDICTED: mavicyanin-like [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 5.8e-102 Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 1
BLAST of CSPI02G13650 vs. NCBI nr
Match: gi|659115733|ref|XP_008457708.1| (PREDICTED: mavicyanin-like [Cucumis melo]) HSP 1 Score: 348.6 bits (893), Expect = 6.5e-93 Identity = 161/170 (94.71%), Postives = 164/170 (96.47%), Query Frame = 1
BLAST of CSPI02G13650 vs. NCBI nr
Match: gi|700206823|gb|KGN61942.1| (hypothetical protein Csa_2G270850 [Cucumis sativus]) HSP 1 Score: 329.7 bits (844), Expect = 3.1e-87 Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 1
BLAST of CSPI02G13650 vs. NCBI nr
Match: gi|743792992|ref|XP_011045965.1| (PREDICTED: mavicyanin-like [Populus euphratica]) HSP 1 Score: 169.5 bits (428), Expect = 5.4e-39 Identity = 84/164 (51.22%), Postives = 106/164 (64.63%), Query Frame = 1
BLAST of CSPI02G13650 vs. NCBI nr
Match: gi|224105149|ref|XP_002313702.1| (hypothetical protein POPTR_0009s13850g [Populus trichocarpa]) HSP 1 Score: 168.3 bits (425), Expect = 1.2e-38 Identity = 83/164 (50.61%), Postives = 105/164 (64.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |