Cucsa.232810 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCAAACTCCACATCAAATCCCAAAACACAACCCACATAGTTTTCAACAATGTCTACAAATCCTCTTAAGGATCAGCCTGTCCCAGCCCAAGGTAATTACATGAGTGAACAAGAAGCAAGTAATTTGATAAAAAAGTATGACAAGAATGGTGATTCAATCCTGACCAAAGATGAGCTAACTGCTTTGATCATTGAGCAAGCTGCTTCTCACCATCACCAACAAATTAAGCCTCAAAAAGTTGAACCTAAGGTTAATATTCCTGATGAGAAGGCGTCCTGTGGGCCGTACAAGATGAGGCTTAGTAAAGATGAAATGAGGGAGATTTTCTTAGAGCATGATATTGATGGTGATGGTTATCTCACTAGAAGTGAGCTAGTAAAAGCTTTTAACATGTGTGGTTCCTTCAATTCATTTAGCAAAGCTAACTATGCTTTGAATTTGGCTGATGCTAATGGAGATGGCTTTATTTGTTTGGATGAACTTGATAAAGTTCTTGAGTATGCTGACAGAGTAATCAACAAGACCAAGAAATGAAGAAGTTGTAAAATTTATGTACTTTTCTATGTTATCATCATATTATATATCTAGTACGTACTCATTAAGAAAAACTAGAATAAAGAGTTTGTTCTTGGAGGACGCATGATCAACTCTTACTATATATATATATATATTGCTCCTCTCTTTGGTTTATTGTTGTGTGTATTTGTCATGTTATCGTCTTCTAATATAAATCTTTCCATATTCATAAATATTTACATGACGAATTAATAAAGATGTTTGTCTTTGATCGAACTAA TCCAAACTCCACATCAAATCCCAAAACACAACCCACATAGTTTTCAACAATGTCTACAAATCCTCTTAAGGATCAGCCTGTCCCAGCCCAAGGTAATTACATGAGTGAACAAGAAGCAAGTAATTTGATAAAAAAGTATGACAAGAATGGTGATTCAATCCTGACCAAAGATGAGCTAACTGCTTTGATCATTGAGCAAGCTGCTTCTCACCATCACCAACAAATTAAGCCTCAAAAAGTTGAACCTAAGGTTAATATTCCTGATGAGAAGGCGTCCTGTGGGCCGTACAAGATGAGGCTTAGTAAAGATGAAATGAGGGAGATTTTCTTAGAGCATGATATTGATGGTGATGGTTATCTCACTAGAAGTGAGCTAGTAAAAGCTTTTAACATGTGTGGTTCCTTCAATTCATTTAGCAAAGCTAACTATGCTTTGAATTTGGCTGATGCTAATGGAGATGGCTTTATTTGTTTGGATGAACTTGATAAAGTTCTTGAGTATGCTGACAGAGTAATCAACAAGACCAAGAAATGAAGAAGTTGTAAAATTTATGTACTTTTCTATGTTATCATCATATTATATATCTAGTACGTACTCATTAAGAAAAACTAGAATAAAGAGTTTGTTCTTGGAGGACGCATGATCAACTCTTACTATATATATATATATATTGCTCCTCTCTTTGGTTTATTGTTGTGTGTATTTGTCATGTTATCGTCTTCTAATATAAATCTTTCCATATTCATAAATATTTACATGACGAATTAATAAAGATGTTTGTCTTTGATCGAACTAA ATGTCTACAAATCCTCTTAAGGATCAGCCTGTCCCAGCCCAAGGTAATTACATGAGTGAACAAGAAGCAAGTAATTTGATAAAAAAGTATGACAAGAATGGTGATTCAATCCTGACCAAAGATGAGCTAACTGCTTTGATCATTGAGCAAGCTGCTTCTCACCATCACCAACAAATTAAGCCTCAAAAAGTTGAACCTAAGGTTAATATTCCTGATGAGAAGGCGTCCTGTGGGCCGTACAAGATGAGGCTTAGTAAAGATGAAATGAGGGAGATTTTCTTAGAGCATGATATTGATGGTGATGGTTATCTCACTAGAAGTGAGCTAGTAAAAGCTTTTAACATGTGTGGTTCCTTCAATTCATTTAGCAAAGCTAACTATGCTTTGAATTTGGCTGATGCTAATGGAGATGGCTTTATTTGTTTGGATGAACTTGATAAAGTTCTTGAGTATGCTGACAGAGTAATCAACAAGACCAAGAAATGA MSTNPLKDQPVPAQGNYMSEQEASNLIKKYDKNGDSILTKDELTALIIEQAASHHHQQIKPQKVEPKVNIPDEKASCGPYKMRLSKDEMREIFLEHDIDGDGYLTRSELVKAFNMCGSFNSFSKANYALNLADANGDGFICLDELDKVLEYADRVINKTKK*
BLAST of Cucsa.232810 vs. TrEMBL
Match: A0A0A0LNG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359930 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 5.8e-87 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of Cucsa.232810 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 9.7e-18 Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 1
BLAST of Cucsa.232810 vs. TrEMBL
Match: A0A0A0LP46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G358880 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.2e-17 Identity = 53/143 (37.06%), Postives = 90/143 (62.94%), Query Frame = 1
BLAST of Cucsa.232810 vs. TrEMBL
Match: A0A0A0LKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.0e-14 Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 1
BLAST of Cucsa.232810 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.0e-14 Identity = 58/165 (35.15%), Postives = 83/165 (50.30%), Query Frame = 1
BLAST of Cucsa.232810 vs. NCBI nr
Match: gi|449470192|ref|XP_004152802.1| (PREDICTED: calcium-binding protein-like [Cucumis sativus]) HSP 1 Score: 328.2 bits (840), Expect = 8.3e-87 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of Cucsa.232810 vs. NCBI nr
Match: gi|659089537|ref|XP_008445563.1| (PREDICTED: probable calcium-binding protein CML32 [Cucumis melo]) HSP 1 Score: 277.3 bits (708), Expect = 1.7e-71 Identity = 136/161 (84.47%), Postives = 149/161 (92.55%), Query Frame = 1
BLAST of Cucsa.232810 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus]) HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17 Identity = 59/161 (36.65%), Postives = 90/161 (55.90%), Query Frame = 1
BLAST of Cucsa.232810 vs. NCBI nr
Match: gi|449470196|ref|XP_004152804.1| (PREDICTED: probable calcium-binding protein CML36 [Cucumis sativus]) HSP 1 Score: 97.1 bits (240), Expect = 3.1e-17 Identity = 53/143 (37.06%), Postives = 90/143 (62.94%), Query Frame = 1
BLAST of Cucsa.232810 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo]) HSP 1 Score: 95.9 bits (237), Expect = 6.9e-17 Identity = 56/154 (36.36%), Postives = 90/154 (58.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |