Cucsa.192250 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAATTGTTTGAAGATTTGAAGGCTAATGAGTCAATTGGGACGGGCGGTTGATGTCAATGATCCTTGAGAACTTTCTTCCAAAATGCTAAATAAGTCAGTCTAAATGGTTTATGAATTCTTTCATTTGCACAAACACTCTACTTTCCACTTGACCTTTTAAATTCGAAAGTACAAAGAAGGGGACTTAGCTAAAATCTCTTTTCTTTTGACGAATGATATAATGAACAATCAAAAGCTTAAATTGATAAATAATGGTAAAATTTGTATGTATATATATATATATATATTTGTATTCATCACTAAACTAAAAAACTTAAGTTGACTAATTAAGATGGAATCATTTCATTTCTTGTAATTCTTTAAACTAAGACAAGGAAACTTTTCTTCATTTCAAAGTTAGAGAAGCAAAAGACTGAACATGGACTAAAGTTTTGTTTTTCTCCTGCTTAATTACTTTATCAAGAAATATTACTTGTAAAGACCATGAAGTAAGATGCTATCATTTGCTAGATATCTATGAACAAATCGATGTACATTCTTCACAAATAACTGTTGAAGAATCTCTGTTCTTCTCTGCTTGGCTCTGTTTGTCACCTGAAATTGACTCAAAAACAAAAGCAGTATGTTTTCCTGTTGTTTTCTTCAAATGATAAAaTTTAAATGGCCATTGATTAACTCACCAAGGATAACTTGTAATTTAGATTGACATTAGTTTCTTGTTTTATAGCAATCTGTAAATGAAGTCCTTGAGACCACTGAACTTAATAGCATAATGGATTCCTTAGTTGGGATACCTGGTGTCAGTGGCCTATCAACCTAGCAACGTAAACTTTTAATCATAGTTGTGGAGCTTGTTTCCAACCCCTCTATCATTTTCATGGATGAGCCTACCACTGGTTTATATTGCAAGGCAGCTGCAATTGTCATGCGAGCCATCAAGAATGTGGCTGATACTGGAAGAACAATAGTTTGTACCATCCATCAGCCAAGTATTGACATCTTTGAATTTTTTGATCAG ATGGAGGAATTGTTTGAAGATTTGAAGGCTAATGAGTCAATTGGGACGGGCGATATCTATGAACAAATCGATGTACATTCTTCACAAATAACTGTTGAAGAATCTCTGTTCTTCTCTGCTTGGCTCTGTTTGTCACCTGAAATTGACTCAAAAACAAAAGCACAATCTGTAAATGAAGTCCTTGAGACCACTGAACTTAATAGCATAATGGATTCCTTAGTTGGGATACCTGTTGTGGAGCTTGTTTCCAACCCCTCTATCATTTTCATGGATGAGCCTACCACTGGTTTATATTGCAAGGCAGCTGCAATTGTCATGCGAGCCATCAAGAATGTGGCTGATACTGGAAGAACAATAGTTTGTACCATCCATCAGCCAAGTATTGACATCTTTGAATTTTTTGATCAG ATGGAGGAATTGTTTGAAGATTTGAAGGCTAATGAGTCAATTGGGACGGGCGATATCTATGAACAAATCGATGTACATTCTTCACAAATAACTGTTGAAGAATCTCTGTTCTTCTCTGCTTGGCTCTGTTTGTCACCTGAAATTGACTCAAAAACAAAAGCACAATCTGTAAATGAAGTCCTTGAGACCACTGAACTTAATAGCATAATGGATTCCTTAGTTGGGATACCTGTTGTGGAGCTTGTTTCCAACCCCTCTATCATTTTCATGGATGAGCCTACCACTGGTTTATATTGCAAGGCAGCTGCAATTGTCATGCGAGCCATCAAGAATGTGGCTGATACTGGAAGAACAATAGTTTGTACCATCCATCAGCCAAGTATTGACATCTTTGAATTTTTTGATCAG MEELFEDLKANESIGTGDIYEQIDVHSSQITVEESLFFSAWLCLSPEIDSKTKAQSVNEVLETTELNSIMDSLVGIPVVELVSNPSIIFMDEPTTGLYCKAAAIVMRAIKNVADTGRTIVCTIHQPSIDIFEFFDQ
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 6.4e-40 Identity = 87/131 (66.41%), Postives = 99/131 (75.57%), Query Frame = 1
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.4e-39 Identity = 86/131 (65.65%), Postives = 99/131 (75.57%), Query Frame = 1
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: AB41G_ORYSJ (ABC transporter G family member 41 OS=Oryza sativa subsp. japonica GN=ABCG41 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 5.4e-39 Identity = 83/131 (63.36%), Postives = 101/131 (77.10%), Query Frame = 1
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2) HSP 1 Score: 161.8 bits (408), Expect = 5.4e-39 Identity = 86/131 (65.65%), Postives = 98/131 (74.81%), Query Frame = 1
BLAST of Cucsa.192250 vs. Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.2e-38 Identity = 84/131 (64.12%), Postives = 97/131 (74.05%), Query Frame = 1
BLAST of Cucsa.192250 vs. TrEMBL
Match: A0A0A0LEL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G813820 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 4.6e-45 Identity = 102/131 (77.86%), Postives = 107/131 (81.68%), Query Frame = 1
BLAST of Cucsa.192250 vs. TrEMBL
Match: A0A067DU84_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015591mg PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 5.2e-41 Identity = 92/131 (70.23%), Postives = 103/131 (78.63%), Query Frame = 1
BLAST of Cucsa.192250 vs. TrEMBL
Match: A0A061F362_THECC (Pleiotropic drug resistance 9 OS=Theobroma cacao GN=TCM_026826 PE=3 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 6.8e-41 Identity = 91/131 (69.47%), Postives = 104/131 (79.39%), Query Frame = 1
BLAST of Cucsa.192250 vs. TrEMBL
Match: F6I4H1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00470 PE=3 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.2e-40 Identity = 90/131 (68.70%), Postives = 103/131 (78.63%), Query Frame = 1
BLAST of Cucsa.192250 vs. TrEMBL
Match: A5BJT7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037751 PE=3 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.2e-40 Identity = 90/131 (68.70%), Postives = 103/131 (78.63%), Query Frame = 1
BLAST of Cucsa.192250 vs. TAIR10
Match: AT3G53480.1 (AT3G53480.1 pleiotropic drug resistance 9) HSP 1 Score: 163.7 bits (413), Expect = 8.0e-41 Identity = 86/131 (65.65%), Postives = 99/131 (75.57%), Query Frame = 1
BLAST of Cucsa.192250 vs. TAIR10
Match: AT4G15230.1 (AT4G15230.1 pleiotropic drug resistance 2) HSP 1 Score: 161.8 bits (408), Expect = 3.0e-40 Identity = 86/131 (65.65%), Postives = 98/131 (74.81%), Query Frame = 1
BLAST of Cucsa.192250 vs. TAIR10
Match: AT4G15215.1 (AT4G15215.1 pleiotropic drug resistance 13) HSP 1 Score: 160.6 bits (405), Expect = 6.8e-40 Identity = 85/131 (64.89%), Postives = 97/131 (74.05%), Query Frame = 1
BLAST of Cucsa.192250 vs. TAIR10
Match: AT4G15233.2 (AT4G15233.2 ABC-2 and Plant PDR ABC-type transporter family protein) HSP 1 Score: 160.6 bits (405), Expect = 6.8e-40 Identity = 84/131 (64.12%), Postives = 97/131 (74.05%), Query Frame = 1
BLAST of Cucsa.192250 vs. TAIR10
Match: AT4G15236.1 (AT4G15236.1 ABC-2 and Plant PDR ABC-type transporter family protein) HSP 1 Score: 159.8 bits (403), Expect = 1.2e-39 Identity = 84/131 (64.12%), Postives = 97/131 (74.05%), Query Frame = 1
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|778684998|ref|XP_004136753.2| (PREDICTED: pleiotropic drug resistance protein 3 [Cucumis sativus]) HSP 1 Score: 188.7 bits (478), Expect = 6.6e-45 Identity = 102/131 (77.86%), Postives = 107/131 (81.68%), Query Frame = 1
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|659084937|ref|XP_008443153.1| (PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo]) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43 Identity = 100/131 (76.34%), Postives = 106/131 (80.92%), Query Frame = 1
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|659084939|ref|XP_008443154.1| (PREDICTED: pleiotropic drug resistance protein 3-like isoform X2 [Cucumis melo]) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43 Identity = 100/131 (76.34%), Postives = 106/131 (80.92%), Query Frame = 1
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|641823148|gb|KDO42587.1| (hypothetical protein CISIN_1g015591mg [Citrus sinensis]) HSP 1 Score: 175.3 bits (443), Expect = 7.5e-41 Identity = 92/131 (70.23%), Postives = 103/131 (78.63%), Query Frame = 1
BLAST of Cucsa.192250 vs. NCBI nr
Match: gi|590645040|ref|XP_007031243.1| (Pleiotropic drug resistance 9 [Theobroma cacao]) HSP 1 Score: 174.9 bits (442), Expect = 9.8e-41 Identity = 91/131 (69.47%), Postives = 104/131 (79.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |