Cucsa.178610 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.178610
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	U3 small nucleolar RNA-associated protein 11
Location	scaffold01227 : 940935 .. 946608 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCACCCTAGCCTTTGCCTCTTTCACAAACTACAGCCACCTAGCCTCCTTCTCAGATTGCTCAAGAACCGGAAAGTGAAAGCGGGGGAGAAATTTGATTTCAAGTTCTCCAACCTCAAGGCAGTCCAAgTACTTCTTCTTTTGTTTGAAAGTGTGAATCATTAATATTTGTTTTCGTTCTTTATTCTGATAGTTTTTCAATGAAGGGTCTAAGCTTATATGACTTCCTCAAATTTTTtCTTTtGGGTTTAAGGAATATGCTCCACTATGATTTGGGCTTTTTCATTCTGATTAATGATGTTGCAATTAATTGAGGAAAGTGGTTGTAATGACTGTTTTTTATAAGCAGTTTCAGTATGTTTTAAGGAATGACCACACCGTCTTCAGTCTCGGCATTAGAAGATTGGTCATCATTTTGCATCCGTATTTTATTTGATGCTATTTTGTTCTCCCTATAGGTTTATTTATGAATACTTTTTAATTCATTTATCTTTCTGATAAATTCAATTATGGACAATATAAGATTAGTTGATAAATCCAATGGCATTTTTCGTGGGGGACTCAACTAAATAAGTCATGCATTCTTCATTCCCCCAGTTTTATGAAGTAACATGTGATTGAAGAAAGGGAAAATAGTTAGAGGAAGAAGGTGTGGAATTAAATGAGAATTCTGTAAAAGTTTTCCTGGACTGTGAATTTGGGGATTGCAATTGTGTATATTAATCTGTACATTAAATTTTAGGATTTTTTAATGTATGTGAATGCTGTTGGTGAATATTATTCTTGTGTACGTTGGAGTTAAGTTTTGGTCGAAAAGTGTTTGTGAGATAATTTGGAGTTAATTTGTGGTTGAATGAGATTAATATTTTGGTAGAAGTGGAGGTTTGTGACTAAATATTGTTGGTCATTACTTTTTTTAACCTTTTTtCGGTTAATTAGTGGTTGAAATTTTGTGGGATCTTTTGGGGAGAGGAAAAGTAGAGTTTTTCGCGGTGTGAAGAGGGACCTATTGAAGTTTGGTCCTTCGTAAGGTTTTAGTTTCACGTTTCTGGTTGGACTTCAGTTTCGAAGACTTTTTGTAATTATTCTCTTGGCAATATCTTATTTGGTTGGAAACCCTTTCTTGGGGTTTTTtGTATGCCCTTGTTTTTGTTTtGTTTTTTTtAATGAAAGCAGTTGTTTCTATGAAAAAGTATATGTAATTGAAATTTTTGGATTCGTTTTATGGATGAATGTTGTTGGTGAATTTTATTGTTGTGTACATTGTAGTTAAATTTTGGTTGAATAGTGTTGCTTTGATAATTTAGAGTTAGTTTGTGGTTGAATTATATTTATATTTGATTTTATAGGAGTGGACTAATGGATTGTAATGAATTAGTGTGTACTTCCTATTAACACACTTTTAGATTTGGAAAAGAAGACTAGCCAAAACAACTAATTACCTATAATTTATTCATTTGTTTAATCATAACAAGTACTTAATACAAATTACAAATGTATGAATTTTAAGACTACGGAATTGTTCATAATTTGTATAATTAGGAAAGGAATTCTCATTTCTTCTTTCTCGTTCTCAATAGTGAAAATTACTCACCAAAAGTAATAGAGATCCAAACTTGTTTTCATTTAAAATGAGAATCCAGTATCCACTCATCAAAAGCCGCCAAAGTAATATTATCTCTTAGGGTTTCTTTCTTTCCATGAAAGGTTAACAACTTATACATAGAAGTCACTCATCAAAAGCCAAGCTAATATACTAACTTAATTTTACCACAAAAGTTCCGTTGCTCATATGTTTTATAGGGTTGATGAGAGGTTTCAAATTAAGTTAGAACCTATGCCTAAACCTACTGACATTGCTTTTGACATATGAGAATGATCAAGAGTTGTCCGTATAACGCTGATAGCTTTATAAATCATACAGTGTTTTTTTAAGAAAGCCTAAACCCTTTCATCTTCATCTCATTCTCACTCTCACTCTCACGTGCTCCACCTCCTTTTtCTTCTTCTGCTGCTGTCTTCTTTCACTGTGTCTTTCTGCCTTCTGCCACTTATGCAATTTTTGCTTTTATCTGTCATCATTCTCAAAGTAGGAAATACATGCACATGTGCAAATACCCTAAAAaTTTATGTTCGTTGTTGAATAACATTGCTCTCACAAGTACCTGTAAAAGGCAGCATTTGAATCCCGCTTCATCTTCCCCTAAACCTGTCTAACTGTTAAATCTGTTAGTCGTCATTCTCATCTGTTAGAATATCAACTTTTTTtCTTCTTCTAAACTTGTCGATAGATGTGGATTTCTCTGGTTTCGGGATTGGGTATTTGATTTGTTATTTAAAATGGTGTTCTATTAATAGAAACTTTGAATTTAATCTATGATTTTGTGGAATTTGGGTTGACTGCCTTCTTAACAGTAATATTAACTTACGTGATTGTTTTATGTTTTGGTGTAGGGAAACTAAGACTTAGAAATCATTATTTGGTTGTACTTGCACATCAGTTTCTCGCTCTCTTATTGATTGCAATGTCATCCCTAAGGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAACCGTAAGTGATTAAGTTTTTTCATGGTTTTTtGTTTCTTAAAAATGGAAATTTCAATGTCTAACCTCTTTTATTGGTGATGGGCTCCTGTGATTCATTAGGCAATCTCGGAAAAAATTTGGACTTCTTGAGAAACACAAAGATTATATTCAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGGTAAACTTTGAAATGCCTGTACATCTATTTTCTAATGTTCAGTGAAGGAAATTTTTTtGTTGTTTACTGCCTTCTATAAATGTCCGTGATTTGGTTGTTCTGTATTTTTtATTGTTTGATTTTCAGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTCCATAAACCAGAGTAACGATCTTAGATGATTTCTAGCATAAGATGAATTTCAGCTCTTCTCTTCGTTTCCTTATGTCTCTTGATCTTTATATATTGTATAGGAGTCATGTTAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGTTATATACTTCAGAAGATGCAGAGTGAGAAAAAGGTGGGTTCTTTCGTTCCTTTAGTAACAAGGATTGCTTTGAAAAACTTGCTGATTTATTACTTTATCTAATATATCAAACTCGCACTCCTCTGTACAGAAAATTGAAAAACTGACAGCAACGTTGCATTCTCTTGACAATCAGCCATCAAATAAGCATCTTTACTTTGCTGAAGACAGGTGTGAGCACAATTTGAAACTTTTTCCACTTTTCCAAATGAAAACGCATGAAATAATTCTTGGTCTGCAAACAAATGGGTGGAATCATATAATGTCCACTTACAGTTACTATACTTTGGGTTTCAAACAAGAGCGTCAGGAATGCATAAACATAAGATAAATTTATGATAGAGGGCCTTTTTTACACTAAAGATAAATATATACCAAAGAACTTTTGATGCTGTTGGCCTATGTCATCTTACTTCACAAAAATGCATTCAACCTACTTATTTTACTCAATTTTTTCTGGTGAACATGACTCATTTTCTCCCTGCAAACCCTAAAGCAGTGAAGTTATTTATGTTAATAAATCATTGTCGATTACTTGCAGGGAGGAAGCCAATGAAATTTTATCTCGTTCTTCTAAAGGATTGGTGGCATCATCTGAGGCAGTTCCTGATAGTATTAGAAGGTAACATTATTACCTAGGATACTGACTGCTGCATGTGAATCTTTTTATTTACAAACAGGGCACTTTTATTTGATCCTTACGAGTTTATGTAAATCCCCTCTTCAATCATAGTTGATTACATAATTTCAGGGAGAGCCCCAACGGATCAAAATGAATTAGCCAACAAATAAACTTTTTCCTACTCCTTCACCTCCATTGAGTATTTTCCACTTCTCTTTAATGACATCCTCTGTAAATTATGAGTACAAAAATCGAGTTCATTTTAATGAAAATGAAAGGCGTGGGTTCTAATAATATGTGAGGTTGCATTTACATTTGATTTTTTTtAGTAGTTGGACATTTGGGATAGAATCATTTGCAATCAAAAATGTTCTGGTCTAAACACTTAATCTTCTAAAATCGACTAGGTTCTCTATCCGATTATGACTAAGAGGTTCAATTTTTCACTTAGCAAGTGGTATATATTTTACCCCAGAGGGACTTTCATTCCAACTGCTCAAGATTGTTGCCGATTTGTGTGGTTTCCTTCTTTCATTAGTGATGCTCTTTTTTTtAACACAGGAAAACCATTTCTTCGTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTAAATGAACTAGAGAAACTTTATATGGATATGACACTACAGCAAGAATTAAGGGTACGTTCTAATGTGCTTTTACCTGTTCAAGCATGGTGGACAAGTAGACTGTGTTAAAATGATTATTGAATCTGATATGTGATGATGCATGCTTATATCAGAAAAAGGGTCGCAAACGTAAACTCCGAGAAGATGAACTTTCCAATCCAACTTTGAAACCTGTATATAAGTGGCGGGCAGAACGAAAGCGCTAAAAGGTTAACACTTTTGCTAGCTATATAAAGTTCCGATTATTCTAAAAGAAATTGCTATATTTAGACAACATCAGATTGTCAAGTTTGTAAAAGTTTTGTCTTTGATGTTGCTTTGCGATGGTCCATTGCTCAGGAAAGAAATTAAGGTGTATTTGTAATGACTCTTGAAAAATGTTTTTtCAACAATGTCAATCTTCGTATAGGTGATTTGTGAGATGTGGTTCTTTGGTAGATAGCATGCTTCTTCATAGGACTCGAAGGGTAAAGTTTTTGTAAATGCATGTAACGCCTTGTTCTGCTTGGGTTGAGTTCTTTTTTtAGATTATGTATTAAATAATTATACTTTAACTAATTGGTCCAATTGAAAAATTGGTAGTACTAGTAACATTTGTTTTTGGAAAAAAaTTGCTAGATGGTTTACCAAATGGACATAGGTTGCCCTTCCCTAATATCTAGTTAAGTGGTGTGTTATTATTGCTATTTCTTTTCCTTTCTTAGACTTTCGGAATCATTTGAACATTTCGTATGAGTCTAGTGATTGTTTTTCCTATTTGGGTTGTGTACTTTGACTTCAACTCTCAAGAATTGAAGAACTTGGAAAAATTCAAGAACCATAAAAATGTGATTAGTTTTAGTTTCGTATTACAGAAAAATAGCACTTCAAATTTCTTAAATTGCCCTTGTATTTGTTTTTGTTTCAGTCCCTTGCCCAAGCATAGTTTGCAAGATGTATTTGCAATTTCCAAGGAAACTGGATGAAGCATTGTTTGTTTACCATACAAATGCTTTGAAAGTTGGCTGAAATCACAAGGACCTAAAATTTTGTTTTCACAGCTAATGAGTTAAAACCATGCTGTGTTTCTTCTGGAATGAAGAATGTAATCAATTTTTTGTTGCTGCTATTTACTGTGGAATATAGTTTAAAACGGGTGGATAAATCGAACCTGGGCTTTAGATGTTGTAATGTTGTAGTTTTACGTTTTAATTTGGATTCTGGGTTTCAAGATTTATTCTTTTAGCT

mRNA sequence

CGCACCCTAGCCTTTGCCTCTTTCACAAACTACAGCCACCTAGCCTCCTTCTCAGATTGCTCAAGAACCGGAAAGTGAAAGCGGGGGAGAAATTTGATTTCAAGTTCTCCAACCTCAAGGCAGTCCAAGGAAACTAAGACTTAGAAATCATTATTTGGTTGTACTTGCACATCAGTTTCTCGCTCTCTTATTGATTGCAATGTCATCCCTAAGGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAACCGCAATCTCGGAAAAAATTTGGACTTCTTGAGAAACACAAAGATTATATTCAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTCCATAAACCAGAGAGTCATGTTAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGTTATATACTTCAGAAGATGCAGAGTGAGAAAAAGAAAATTGAAAAACTGACAGCAACGTTGCATTCTCTTGACAATCAGCCATCAAATAAGCATCTTTACTTTGCTGAAGACAGGGAGGAAGCCAATGAAATTTTATCTCGTTCTTCTAAAGGATTGGTGGCATCATCTGAGGCAGTTCCTGATAGTATTAGAAGGAAAACCATTTCTTCGTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTAAATGAACTAGAGAAACTTTATATGGATATGACACTACAGCAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGAGAAGATGAACTTTCCAATCCAACTTTGAAACCTGTATATAAGTGGCGGGCAGAACGAAAGCGCTAAAAGTCCCTTGCCCAAGCATAGTTTGCAAGATGTATTTGCAATTTCCAAGGAAACTGGATGAAGCATTGTTTGTTTACCATACAAATGCTTTGAAAGTTGGCTGAAATCACAAGGACCTAAAATTTTGTTTTCACAGCTAATGAGTTAAAACCATGCTGTGTTTCTTCTGGAATGAAGAATGTAATCAATTTTTTGTTGCTGCTATTTACTGTGGAATATAGTTTAAAACGGGTGGATAAATCGAACCTGGGCTTTAGATGTTGTAATGTTGTAGTTTTACGTTTTAATTTGGATTCTGGGTTTCAAGATTTATTCTTTTAGCT

Coding sequence (CDS)

ATGTCATCCCTAAGGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAACCGCAATCTCGGAAAAAATTTGGACTTCTTGAGAAACACAAAGATTATATTCAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTCCATAAACCAGAGAGTCATGTTAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGTTATATACTTCAGAAGATGCAGAGTGAGAAAAAGAAAATTGAAAAACTGACAGCAACGTTGCATTCTCTTGACAATCAGCCATCAAATAAGCATCTTTACTTTGCTGAAGACAGGGAGGAAGCCAATGAAATTTTATCTCGTTCTTCTAAAGGATTGGTGGCATCATCTGAGGCAGTTCCTGATAGTATTAGAAGGAAAACCATTTCTTCGTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTAAATGAACTAGAGAAACTTTATATGGATATGACACTACAGCAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGAGAAGATGAACTTTCCAATCCAACTTTGAAACCTGTATATAAGTGGCGGGCAGAACGAAAGCGCTAA

Protein sequence

MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATLHSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSRVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR*

Homology

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BLAST of Cucsa.178610 vs. Swiss-Prot
Match: UTP11_ORYSJ (Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0810000 PE=2 SV=2)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-87
Identity = 157/229 (68.56%), Postives = 190/229 (82.97%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+ RR +KERAQP+SRKKFGLLEKHKDYI RAKAFH+KE+T+RKLKEKA+F+NP
Sbjct: 1   MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI ++TVDG+H+P+   NKYT ++LML+KT+D GYILQ +QSEKKKIEKL++ L
Sbjct: 61  DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSML 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSR-SSKGLVASSEAVPDSIRRKTISSYKELEARRS 180
           H LDN+  NKH+YFAEDREE  EI SR   K      + +P  I+RKT SSY+ELE R+ 
Sbjct: 121 HELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRELEERKQ 180

Query: 181 RVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           RV +LEKLY DM LQ+EL+K GRKRKLREDE+ N T +PVYKWRA+RKR
Sbjct: 181 RVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSRPVYKWRAQRKR 229

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BLAST of Cucsa.178610 vs. Swiss-Prot
Match: UTP11_ARATH (Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana GN=At3g60360 PE=1 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 9.0e-79
Identity = 140/228 (61.40%), Postives = 183/228 (80.26%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+PR  +KER+QP++RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD GY+ QK QSEK KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
               +Q S +H+Y+AEDREEA E+  +       S+  +P  I++K   SY++LE R+SR
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQGRSKSDISTVEIPKDIKKKMDRSYRDLEGRKSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
             +LEKLY DM++Q+EL+KKGRKRKLR+DEL NP  K VYKWRA+RKR
Sbjct: 181 AKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228

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BLAST of Cucsa.178610 vs. Swiss-Prot
Match: UTP11_DICDI (Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideum GN=utp11 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-32
Identity = 85/227 (37.44%), Postives = 130/227 (57.27%), Query Frame = 1


Query: 3   SLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNPDE 62
           +LR  +P+R  +ER QP+S KK G LE+ KDY++RAK ++ K DTL+KLK +AAFKNPDE
Sbjct: 5   NLRRLLPQRAKQERPQPESSKKKGFLERKKDYVERAKDYNNKRDTLKKLKLQAAFKNPDE 64

Query: 63  FYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATLHS 122
           F +KMI ++ VDGVH  E        EQ++ +KTQD  Y+  K +++ KKIE+L ATL  
Sbjct: 65  FNYKMISSKLVDGVHS-EISKTSLKKEQIIDIKTQDILYLQSKRRADDKKIERLQATLQY 124

Query: 123 LDN--QPSNKHLYFAEDREEAN----------------------EILSRSSKGLVASSEA 182
           +D+  +P+ + +Y  +++E  N                      +I       LV + + 
Sbjct: 125 MDSGLEPTEQIIYVDDEKEVKNFSATKYFDTVPDAFNGSLSTIPKISKLKEGSLVVNPKT 184

Query: 183 VP--DSIRRKTISSYKELEARRSRVNELEKLYMDMTLQQELRKKGRK 204
            P    +   T +SYKEL+ R+ R ++L K  MD++  +   K+G K
Sbjct: 185 APTLGQLEAMTATSYKELKERKLRRDQLFKAEMDLSKSKIQLKRGTK 230

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BLAST of Cucsa.178610 vs. Swiss-Prot
Match: UTP11_MOUSE (Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus GN=Utp11 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.5e-30
Identity = 87/246 (35.37%), Postives = 132/246 (53.66%), Query Frame = 1


Query: 10  RRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIR 69
           +R ++ER+QP  RK+ GLLEK KDY  RA  +HKK+D LR L++KA  KNPDEFY+KM R
Sbjct: 13  QREHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTR 72

Query: 70  TRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATLHSLDNQ--P 129
            +  DGVH  + +  + TAEQL LM+TQD  YI  K  +E KKIE+L + LH LD Q   
Sbjct: 73  AKLQDGVHIFKENKEEVTAEQLKLMRTQDIKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query: 130 SNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEAR--------RS 189
             KH++F + ++E        +  L  + E V     R  I + ++   +        + 
Sbjct: 133 QKKHVFFFDTKKEVERF--DVATHLQTAPELVDRVYNRPRIETLQKERVKGATPQTGLKR 192

Query: 190 RVNELEKLYMDMTLQQELRK-----------------KGRKRKLREDELSNPTLKPVYKW 229
              E +K Y  +T + E  K                 K +K K++++ +++P    +Y++
Sbjct: 193 IAKERQKQYDCLTQRIEREKQLFVVAQKIQTRKDLMDKTQKVKVKKETVNSPA---IYRF 252

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BLAST of Cucsa.178610 vs. Swiss-Prot
Match: UTP11_RAT (Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus GN=Utp11 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-29
Identity = 87/256 (33.98%), Postives = 138/256 (53.91%), Query Frame = 1


Query: 2   SSLRNAVP--RRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKN 61
           ++ R AV   +R Y+ER+QP  RK  GLLEK KDY  RA  + KK++ L+ L++KA  KN
Sbjct: 3   AAFRKAVKSRQREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKN 62

Query: 62  PDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTAT 121
           PDEFY+KM R +  DGVH  +    + T EQL LM+TQD  YI  K  +E KKIE+L + 
Sbjct: 63  PDEFYYKMTRVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSE 122

Query: 122 LHSLDNQ--PSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEAR 181
           LH LD Q    N+H++F + ++E  +     +  L  + E V     R  I + ++ + +
Sbjct: 123 LHLLDFQGKQQNRHVFFFDTKKEVEQF--DVAAHLQTAPELVDRVFNRPRIETLQKEKVK 182

Query: 182 --------RSRVNELEKLYMDMT-----------------LQQELRKKGRKRKLREDELS 229
                   +    E +K Y  +T                  +++L  K +K K++++ ++
Sbjct: 183 GVTNQTGLKRIAKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVN 242

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BLAST of Cucsa.178610 vs. TrEMBL
Match: A0A0A0LKH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074140 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 6.4e-124
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR
Sbjct: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228

[Close]

BLAST of Cucsa.178610 vs. TrEMBL
Match: M5WIT3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010965mg PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.6e-98
Identity = 177/228 (77.63%), Postives = 207/228 (90.79%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+ RR +KERAQP+SRKKFGLLEKHKDY++RAKA+HKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPESRKKFGLLEKHKDYVERAKAYHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI+TRTVDGVHK ES  NKYT E+L+LMKTQD GYILQK+QSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHKLESQANKYTPEELLLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDN+PS++H+YFAEDREEA EI SRS  G + +SE +PD I+RKT +SY+ELEARR+R
Sbjct: 121 HSLDNRPSSRHVYFAEDREEAKEIHSRSKSGTMPASEDIPDHIKRKTAASYRELEARRNR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           VNELEK+Y DM +Q+EL+KKGRKRKLREDE+  PT KPV+KWRAERKR
Sbjct: 181 VNELEKIYTDMAMQKELQKKGRKRKLREDEIVCPTSKPVFKWRAERKR 228

[Close]

BLAST of Cucsa.178610 vs. TrEMBL
Match: M5VL75_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010969mg PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.7e-98
Identity = 177/228 (77.63%), Postives = 207/228 (90.79%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+ RR +KERAQP+SRKKFGLLEKHKDY++RAKA+HKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPESRKKFGLLEKHKDYVERAKAYHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI+TRTV+GVHK ES  NKYT E+L+LMKTQD GYILQK+QSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVNGVHKLESQANKYTQEELLLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDN+PS++H+YFAEDREEA EI SRS  G + +SE +PD I+RKT SSY+ELEARR+R
Sbjct: 121 HSLDNRPSSRHVYFAEDREEAKEIQSRSKSGTMPASEDIPDHIKRKTASSYRELEARRNR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           VNELEK+Y DM +Q+EL+KKGRKRKLREDE+  PT KPV+KWRAERKR
Sbjct: 181 VNELEKIYTDMAMQKELQKKGRKRKLREDEVVCPTSKPVFKWRAERKR 228

[Close]

BLAST of Cucsa.178610 vs. TrEMBL
Match: A0A061F2S3_THECC (U3 small nucleolar RNA-associated protein 11 OS=Theobroma cacao GN=TCM_024053 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.3e-95
Identity = 174/229 (75.98%), Postives = 204/229 (89.08%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+ RR +KERAQP SRKKFGLLEKHKDY+ RAKAFHKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPSSRKKFGLLEKHKDYVVRAKAFHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYF+MI+TRTVDGVHKPES  NKYT E+LMLMKTQD GYILQKMQSEKKKIEKLTA L
Sbjct: 61  DEFYFQMIKTRTVDGVHKPESQANKYTQEELMLMKTQDMGYILQKMQSEKKKIEKLTAVL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEA-VPDSIRRKTISSYKELEARRS 180
           H +DNQPSN+H+Y+AEDR+EA E+ S+SS+     S A +PD I+RKT +SY+ELEAR+S
Sbjct: 121 HCVDNQPSNRHIYYAEDRQEARELYSQSSENRTPPSSADIPDHIKRKTATSYRELEARKS 180

Query: 181 RVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           RVNEL K+YM+M+L++EL+KKGRKRKLREDEL  PT KPV+KWR+ERKR
Sbjct: 181 RVNELAKIYMEMSLKKELQKKGRKRKLREDELICPTSKPVFKWRSERKR 229

[Close]

BLAST of Cucsa.178610 vs. TrEMBL
Match: A0A059DHW0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02172 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 8.1e-95
Identity = 171/228 (75.00%), Postives = 206/228 (90.35%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+ RR +KERAQPQSRKKFGLLEKHKDY+ RA AFHKKED+LR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPQSRKKFGLLEKHKDYVVRATAFHKKEDSLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKM++T+TVDGVH+P+S  NKYT E+LMLMKTQD GYILQK+QSEKKKIEKLTATL
Sbjct: 61  DEFYFKMVKTKTVDGVHRPQSQANKYTNEELMLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLD++PS+ H+Y+AEDREEA EI S S  G + S E +PD+I+RKT +SY+ELEAR+SR
Sbjct: 121 HSLDDRPSSNHVYYAEDREEAKEIQSSSKNGKI-SFEDIPDNIKRKTAASYRELEARKSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           VN+LEK+YM+M+L++EL+KKG+KRKLREDE+  PT KPVYKWR+ERKR
Sbjct: 181 VNDLEKIYMEMSLKKELQKKGKKRKLREDEIICPTSKPVYKWRSERKR 227

[Close]

BLAST of Cucsa.178610 vs. TAIR10
Match: AT3G60360.1 (AT3G60360.1 embryo sac development arrest 14)

HSP 1 Score: 294.7 bits (753), Expect = 5.0e-80
Identity = 140/228 (61.40%), Postives = 183/228 (80.26%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+PR  +KER+QP++RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD GY+ QK QSEK KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
               +Q S +H+Y+AEDREEA E+  +       S+  +P  I++K   SY++LE R+SR
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQGRSKSDISTVEIPKDIKKKMDRSYRDLEGRKSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
             +LEKLY DM++Q+EL+KKGRKRKLR+DEL NP  K VYKWRA+RKR
Sbjct: 181 AKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228

[Close]

BLAST of Cucsa.178610 vs. NCBI nr
Match: gi|449470253|ref|XP_004152832.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 9.1e-124
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR
Sbjct: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228

[Close]

BLAST of Cucsa.178610 vs. NCBI nr
Match: gi|659082535|ref|XP_008441892.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo])

HSP 1 Score: 439.1 bits (1128), Expect = 4.7e-120
Identity = 220/228 (96.49%), Postives = 226/228 (99.12%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESRVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKT++SYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTVASYKELEARRSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           V+ELEKLYMDMTLQQELRKKGRKRKLREDE++NPT KPVYKWRAERKR
Sbjct: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDEVANPTSKPVYKWRAERKR 228

[Close]

BLAST of Cucsa.178610 vs. NCBI nr
Match: gi|595868212|ref|XP_007211987.1| (hypothetical protein PRUPE_ppa010965mg [Prunus persica])

HSP 1 Score: 367.1 bits (941), Expect = 2.3e-98
Identity = 177/228 (77.63%), Postives = 207/228 (90.79%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+ RR +KERAQP+SRKKFGLLEKHKDY++RAKA+HKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPESRKKFGLLEKHKDYVERAKAYHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI+TRTVDGVHK ES  NKYT E+L+LMKTQD GYILQK+QSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHKLESQANKYTPEELLLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDN+PS++H+YFAEDREEA EI SRS  G + +SE +PD I+RKT +SY+ELEARR+R
Sbjct: 121 HSLDNRPSSRHVYFAEDREEAKEIHSRSKSGTMPASEDIPDHIKRKTAASYRELEARRNR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           VNELEK+Y DM +Q+EL+KKGRKRKLREDE+  PT KPV+KWRAERKR
Sbjct: 181 VNELEKIYTDMAMQKELQKKGRKRKLREDEIVCPTSKPVFKWRAERKR 228

[Close]

BLAST of Cucsa.178610 vs. NCBI nr
Match: gi|595793327|ref|XP_007200412.1| (hypothetical protein PRUPE_ppa010969mg [Prunus persica])

HSP 1 Score: 366.3 bits (939), Expect = 3.9e-98
Identity = 177/228 (77.63%), Postives = 207/228 (90.79%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+ RR +KERAQP+SRKKFGLLEKHKDY++RAKA+HKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPESRKKFGLLEKHKDYVERAKAYHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI+TRTV+GVHK ES  NKYT E+L+LMKTQD GYILQK+QSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVNGVHKLESQANKYTQEELLLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDN+PS++H+YFAEDREEA EI SRS  G + +SE +PD I+RKT SSY+ELEARR+R
Sbjct: 121 HSLDNRPSSRHVYFAEDREEAKEIQSRSKSGTMPASEDIPDHIKRKTASSYRELEARRNR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           VNELEK+Y DM +Q+EL+KKGRKRKLREDE+  PT KPV+KWRAERKR
Sbjct: 181 VNELEKIYTDMAMQKELQKKGRKRKLREDEVVCPTSKPVFKWRAERKR 228

[Close]

BLAST of Cucsa.178610 vs. NCBI nr
Match: gi|645278667|ref|XP_008244334.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Prunus mume])

HSP 1 Score: 365.9 bits (938), Expect = 5.1e-98
Identity = 176/228 (77.19%), Postives = 207/228 (90.79%), Query Frame = 1


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+ RR +KERAQP+SRKKFGLLEKHKDY++RAKA+HKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPESRKKFGLLEKHKDYVERAKAYHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI+TRTVDGVHK ES  NKYT E+L+LMKTQD GYILQK+QSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHKLESQANKYTPEELLLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDN+PS++H+YFAEDREEA EI SRS  G + +SE +PD I+RKT +SY+ELEARR+R
Sbjct: 121 HSLDNRPSSRHVYFAEDREEAKEIHSRSKSGTMPASEDIPDHIKRKTAASYRELEARRNR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           VNELE++Y DM +Q+EL+KKGRKRKLREDE+  PT KPV+KWRAERKR
Sbjct: 181 VNELERIYTDMAMQKELQKKGRKRKLREDEIVCPTSKPVFKWRAERKR 228

The following BLAST results are available for this feature:

BLAST of Cucsa.178610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UTP11_ORYSJ	1.1e-87	68.56	Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. jap...	[more]
UTP11_ARATH	9.0e-79	61.40	Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana GN...	[more]
UTP11_DICDI	1.7e-32	37.44	Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideu...	[more]
UTP11_MOUSE	4.5e-30	35.37	Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus GN=Utp11 P...	[more]
UTP11_RAT	2.2e-29	33.98	Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus GN=Ut...	[more]

BLAST of Cucsa.178610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKH7_CUCSA	6.4e-124	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074140 PE=4 SV=1	[more]
M5WIT3_PRUPE	1.6e-98	77.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010965mg PE=4 SV=1	[more]
M5VL75_PRUPE	2.7e-98	77.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010969mg PE=4 SV=1	[more]
A0A061F2S3_THECC	1.3e-95	75.98	U3 small nucleolar RNA-associated protein 11 OS=Theobroma cacao GN=TCM_024053 PE...	[more]
A0A059DHW0_EUCGR	8.1e-95	75.00	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02172 PE=4 SV=1	[more]

BLAST of Cucsa.178610 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60360.1	5.0e-80	61.40	embryo sac development arrest 14	[more]

BLAST of Cucsa.178610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449470253\|ref\|XP_004152832.1\|	9.1e-124	100.00	PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativu...	[more]
gi\|659082535\|ref\|XP_008441892.1\|	4.7e-120	96.49	PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo]	[more]
gi\|595868212\|ref\|XP_007211987.1\|	2.3e-98	77.63	hypothetical protein PRUPE_ppa010965mg [Prunus persica]	[more]
gi\|595793327\|ref\|XP_007200412.1\|	3.9e-98	77.63	hypothetical protein PRUPE_ppa010969mg [Prunus persica]	[more]
gi\|645278667\|ref\|XP_008244334.1\|	5.1e-98	77.19	PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007144	SSU_processome_Utp11

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

Vocabulary: **Cellular Component**
Term	Definition
GO:0032040	small-subunit processome

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0000741	karyogamy
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.178610.1	Cucsa.178610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007144	Small-subunit processome, Utp11	PANTHER	PTHR12838	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11	coord: 2..228 score: 4.8E
IPR007144	Small-subunit processome, Utp11	PFAM	PF03998	Utp11	coord: 10..228 score: 6.9
None	No IPR available	unknown	Coil	Coil	coord: 106..126 scor
None	No IPR available	PANTHER	PTHR12838:SF0	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11-RELATED	coord: 2..228 score: 4.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.178610	Csa2G074140	Cucumber (Chinese Long) v2	cgycuB274
Cucsa.178610	ClCG11G010890	Watermelon (Charleston Gray)	cgywcgB319
Cucsa.178610	CSPI02G07140	Wild cucumber (PI 183967)	cgycpiB284
Cucsa.178610	CmaCh12G009530	Cucurbita maxima (Rimu)	cgycmaB0509
Cucsa.178610	CmoCh12G009530	Cucurbita moschata (Rifu)	cgycmoB0509
Cucsa.178610	Lsi11G008590	Bottle gourd (USVL1VR-Ls)	cgylsiB300
Cucsa.178610	Cp4.1LG07g07900	Cucurbita pepo (Zucchini)	cgycpeB0492
Cucsa.178610	CsaV3_2G009570	Cucumber (Chinese Long) v3	cgycucB287
Cucsa.178610	Cla97C11G217050	Watermelon (97103) v2	cgywmbB323
Cucsa.178610	Bhi06G000987	Wax gourd	cgywgoB366
Cucsa.178610	Carg22653	Silver-seed gourd	carcgyB0005

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.178610	Cucurbita maxima (Rimu)	cgycmaB0510
Cucsa.178610	Cucurbita moschata (Rifu)	cgycmoB0510
Cucsa.178610	Melon (DHL92) v3.5.1	cgymeB320
Cucsa.178610	Cucurbita pepo (Zucchini)	cgycpeB0491
Cucsa.178610	Melon (DHL92) v3.6.1	cgymedB315
Cucsa.178610	Silver-seed gourd	carcgyB0204