CmaCh12G009530 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G009530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	U3 small nucleolar RNA-associated protein 11
Location	Cma_Chr12 : 7467995 .. 7471321 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACGTCTTCCTCTCACTCTTTACGTGTTCAACTTCTTTCTTCTTCAAGCCGGCTCCTCCTCCCTCTCAGCAGATCAGTGCCGCCGCCGCCGCCACATCCCTCCGCCTTCTGCCGCTTCGTACGTAAATTTTTTCTCTGGATATTTTATCATTCTCAAATTGGAGGCAAGAACGCCTGCAAATAACCCTAATTTTTTTTTTCTATTCGTTTTATAATAGTTTTGCTCTGAAAACTACATGTAAACGGAAGAAATCGATCCCTATTTCGTCTCCCCTCAACCGTTCCAACTGTAAAATCTACTGTTTATCGTTCTCATGTGTTAGTAATTTCAATTTTTTTTAACTCTCTAGAAATTTGTCGGTTGTGATGCGAATTTCTCTGGTTTTGAGTCTGGGTATTTGGGTATTTGGGGTGTTATTTAAAGGGGCATTCGCCTAATTGTATCTTCGAATTTCTTATATTATTCCTTGAATTTGGGTTGATTGCTTTTCTGATACTGGCTTGCACAATTGCTTTATATTCGAATGTAGGGAAGCTTATTTTGTTGTAATTGCAATGTCGTCCTTAAAGAATGCGGTTCCTAAACGGCCTTACAAGGAGCGAGCTCAGCCGTAAGTGATAAGGCTTTTCATGTTACTATTGTTATTGTGTGTGTGTGTGTGTTTTTTTTTTAACCTTTTATGGATGACGGATTTGTGTACTTGTTTAGGAATTCTCGGAAGAAATTTGGGCTTCTTGAGAAGCATAAAGACTATGTCGAGCGTGCTAAGGCTTATCATAAGAAGGAAGATACTTTACGGGTAATGTTTGAAACGCCTTTACCACGGCATTTACACAATTTTCTGTTATTTATCGAATTCTGTCGACGTGTCCTTGATTTGGTTGTTTTGTATTCTTTGTGTTGATCAATTTTCAGAAACTTAAAGAGAAAGCAGCATTCAAGAATCCAGATGAGTTTTACTTTAAGATGATTAAGACGAGAACAGTTGACGGAGTCCATAGACCAGAGTAATCACTGTAGATGATTTCGAACATCGACTGATTTTGGTACTTCTTTCTGTTTTCTTATGCTCTTAATCTTTATATGTTGTAGGAGTCAAGTAAATAAGTATACTGCGGAGCAACTCATGTTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAGTGCAGAGTGAGAAAAGGGTGAGTTCTTAGCGAGGTTTTGTTTCTTTTATTGACTAGGATTCCTTTGAAGAACTTGTTGATTTATTAATTTATCTAATATATCAACTCTGACTCTTCTGTACAGAAAATTGAAAAACTGACAGCCACGTTGCATTCGCTTGATAATCAGCCATCAAATAAGCATATTTACTTTGCCGAAGACAGGTTTGAGCACAACTTGAAACTTTTTCCACTTTCCCAAACGAAATTACATCAAATAGTTCTTTGTCTGCAAATGGGCAAAACCAAGAGTTATTTGATAAACGCATCAAATAGTTATTTGGTCTTCAAATGGGATAGAAATGCCTCATTTTTTCATAATTATCTTGTTACTTCAGTTTTCTTGAGACTATAGTCATTATGGTTGTGACTTGGTGTAAATGCGTCCTACCCTTCCATCACTATAGCTATGCCACTCTTTTAATCAATTGGAGAGCTCTTTTGTAAATATCCTTTTGGGTTCTCTTCGTCTCTTGTAACTTCATTTGATCAGTGAAATTGTTTCTTATTCAATACTCTTTGGTTTCAAAGAAGAGTCTCAGGAATGCATTAACTTAAGATAAATATATACAAAAGAACATATGATACTGTTGACTAATGTCATCTTATTACTAAAATGCATTCAACCTACTTATTTTGGAGAAATTGGTAAACCTGACTCATTAGCTTCCTGCTCATTCTAATGCAGTGAAGTTTTTTATGTTTAGTTGTTTATAAATTATTTTTGATTACTTGCAGGGAGGAGGCCAATGAAATTCAATCTCGCTCTTCCAAAGGTAGATCAGTGGCATCGTCTGAGGCAGTTCCTGACAGTATTAAAAGGTAGCATTATTACTGTGGATGCAGACAGCTGCATGTAAATCTTTTTTTAGGACACTTTTAATTGTTTTGAAAAGATTAATCAAGCTTATGCAAAGGAGGCACCCCCCTAGGAGTTGACATAAATCCTCTTCGATTATGGTTGATTACAATGGTCAAATGAATTTCACAGGAAGCTTCAACGGGAACAAAATAATTTAGCTAACAAATAAACTTTTTCCCACTTACCCTCCATTGAATATTTTTTCCGCTCTTTGATGGCCCCCTGTAGTATAGTTTTGGTTGCTTAATTGCAAGTGAACCATTGTGTTTCAACCTATGCAGTTATGATGAATTTACGTATGTTTGATTGAAAAGGAGCGGGCATGGGTTTTAAAATTTTATGATGTAGCTGCGAACACTTGTTAGTTTTAAGCAATCGGACAATTGGTATAGAATCATTAGCAACATCACGTGCATCGTTCAAATTGAAGTAATGTCAAAATTCTTGACATTGGATTTTTCAGTTTGTGTGAGAATATTACTTAGAACTTCATGTTGGATGTCCGCAACTTATAAACCTCACAATATTACCTAGGGCTGGAGTGTTGAATGGACGGTGTGAACAAAGATGTTTTATCACTTCCAGATTCTCCCATTATGAGTATAATTGCGGGAATATATTTAGTTATGAGGCTTGAACACTACTTTATTCTGCACTGACGGTAAAGATTCTGCATGTTGAAGTATAGGTTTATTCCTCTCCTGTCCTCCAAAAAGTTTGTTCCTTTCAAGCCAAGTATTCCAGAGGAATTTCGGATGAGATCGAGCCAAATGATTTTAGGGCTAACCTTAATCTTCTACCAATGATCAGGTTCTATAACCGGTCATACATAATAATTATAATTTGAATCTTTAGAGGTTCAATTTCTTACTTGGCATATTTTACTCAGTAGATTGGCAGTCTTTTTCAATGCATCAAATGTTACCTGATTTGTGTGTGGTTTCCTTCTTTTCTGAACACAGGAAAACCATTTCGTCTTACAAAGAACTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTGGAGAAACTTTATATGGATATGACACTGCAACAGGAATTAATGGTACTTTTCTAATGTGATTGTAGCTGTGTCAGTTTCGTGGACGGGTAGATCGTGTATTAAAATGATTATTGAATCTGAAATGTGATACATGCTTATAACAGAAAAAGGGTCGCAAACGTAAACTCAGAGAAGATGAACTCACCAATCCAACTTCAAAATCTGTATACAAGTGGAGGGCAGAACGAAAGCGATAA

mRNA sequence

TTACGTCTTCCTCTCACTCTTTACGTGTTCAACTTCTTTCTTCTTCAAGCCGGCTCCTCCTCCCTCTCAGCAGATCAGTGCCGCCGCCGCCGCCACATCCCTCCGCCTTCTGCCGCTTCGGAAGCTTATTTTGTTGTAATTGCAATGTCGTCCTTAAAGAATGCGGTTCCTAAACGGCCTTACAAGGAGCGAGCTCAGCCGAATTCTCGGAAGAAATTTGGGCTTCTTGAGAAGCATAAAGACTATGTCGAGCGTGCTAAGGCTTATCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCATTCAAGAATCCAGATGAGTTTTACTTTAAGATGATTAAGACGAGAACAGTTGACGGAGTCCATAGACCAGAGAGTCAAGTAAATAAGTATACTGCGGAGCAACTCATGTTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAGTGCAGAGTGAGAAAAGGAAAATTGAAAAACTGACAGCCACGTTGCATTCGCTTGATAATCAGCCATCAAATAAGCATATTTACTTTGCCGAAGACAGGGAGGAGGCCAATGAAATTCAATCTCGCTCTTCCAAAGGTAGATCAGTGGCATCGTCTGAGGCAGTTCCTGACAGTATTAAAAGGAAAACCATTTCGTCTTACAAAGAACTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTGGAGAAACTTTATATGGATATGACACTGCAACAGGAATTAATGAAAAAGGGTCGCAAACGTAAACTCAGAGAAGATGAACTCACCAATCCAACTTCAAAATCTGTATACAAGTGGAGGGCAGAACGAAAGCGATAA

Coding sequence (CDS)

ATGTCGTCCTTAAAGAATGCGGTTCCTAAACGGCCTTACAAGGAGCGAGCTCAGCCGAATTCTCGGAAGAAATTTGGGCTTCTTGAGAAGCATAAAGACTATGTCGAGCGTGCTAAGGCTTATCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCATTCAAGAATCCAGATGAGTTTTACTTTAAGATGATTAAGACGAGAACAGTTGACGGAGTCCATAGACCAGAGAGTCAAGTAAATAAGTATACTGCGGAGCAACTCATGTTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAGTGCAGAGTGAGAAAAGGAAAATTGAAAAACTGACAGCCACGTTGCATTCGCTTGATAATCAGCCATCAAATAAGCATATTTACTTTGCCGAAGACAGGGAGGAGGCCAATGAAATTCAATCTCGCTCTTCCAAAGGTAGATCAGTGGCATCGTCTGAGGCAGTTCCTGACAGTATTAAAAGGAAAACCATTTCGTCTTACAAAGAACTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTGGAGAAACTTTATATGGATATGACACTGCAACAGGAATTAATGAAAAAGGGTCGCAAACGTAAACTCAGAGAAGATGAACTCACCAATCCAACTTCAAAATCTGTATACAAGTGGAGGGCAGAACGAAAGCGATAA

Protein sequence

MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR

Homology

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BLAST of CmaCh12G009530 vs. Swiss-Prot
Match: UTP11_ORYSJ (Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0810000 PE=2 SV=2)

HSP 1 Score: 305.4 bits (781), Expect = 5.1e-82
Identity = 155/229 (67.69%), Postives = 191/229 (83.41%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+ +R +KERAQP SRKKFGLLEKHKDY+ RAKA+H+KE+T+RKLKEKA+F+NP
Sbjct: 1   MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMI ++TVDG+HRP+ + NKYT ++LML+KT+D GYILQ +QSEK+KIEKL++ L
Sbjct: 61  DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSML 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           H LDN+  NKH+YFAEDREE  EIQSR  +  S    + +P  IKRKT SSY+ELE R+ 
Sbjct: 121 HELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRELEERKQ 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV +LEKLY DM LQ+EL K GRKRKLREDE+ N TS+ VYKWRA+RKR
Sbjct: 181 RVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSRPVYKWRAQRKR 229

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BLAST of CmaCh12G009530 vs. Swiss-Prot
Match: UTP11_ARATH (Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana GN=At3g60360 PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.9e-74
Identity = 141/229 (61.57%), Postives = 187/229 (81.66%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+P+  +KER+QP +RK+FG+LEKHKDY+ RA AYHKK++TL+ L++KAAFKNP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEF FKMI ++TVDG HRP+ +VNKY+AE+LM+MKTQD GY+ QK QSEK KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
               +Q S +H+Y+AEDREEA E++ +  + +S  S+  +P  IK+K   SY++LE R+S
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQ-GRSKSDISTVEIPKDIKKKMDRSYRDLEGRKS 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           R  +LEKLY DM++Q+EL KKGRKRKLR+DEL NP  K+VYKWRA+RKR
Sbjct: 181 RAKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228

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BLAST of CmaCh12G009530 vs. Swiss-Prot
Match: UTP11_DICDI (Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideum GN=utp11 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27
Identity = 87/227 (38.33%), Postives = 133/227 (58.59%), Query Frame = 1


Query: 3   SLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDE 62
           +L+  +P+R  +ER QP S KK G LE+ KDYVERAK Y+ K DTL+KLK +AAFKNPDE
Sbjct: 5   NLRRLLPQRAKQERPQPESSKKKGFLERKKDYVERAKDYNNKRDTLKKLKLQAAFKNPDE 64

Query: 63  FYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATLHS 122
           F +KMI ++ VDGVH   S+ +    EQ++ +KTQD  Y+  K +++ +KIE+L ATL  
Sbjct: 65  FNYKMISSKLVDGVHSEISKTS-LKKEQIIDIKTQDILYLQSKRRADDKKIERLQATLQY 124

Query: 123 LDN--QPSNKHIYFAEDREEANEIQ---------------------SRSSKGRSVASSEA 182
           +D+  +P+ + IY  +++E  N                        S+  +G  V + + 
Sbjct: 125 MDSGLEPTEQIIYVDDEKEVKNFSATKYFDTVPDAFNGSLSTIPKISKLKEGSLVVNPKT 184

Query: 183 VP--DSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMKKGRK 205
            P    ++  T +SYKEL+ R+ R  +L K  MD++  +  +K+G K
Sbjct: 185 APTLGQLEAMTATSYKELKERKLRRDQLFKAEMDLSKSKIQLKRGTK 230

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BLAST of CmaCh12G009530 vs. Swiss-Prot
Match: UTP11_MOUSE (Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus GN=Utp11 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.8e-24
Identity = 84/245 (34.29%), Postives = 134/245 (54.69%), Query Frame = 1


Query: 10  KRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIK 69
           +R ++ER+QP  RK+ GLLEK KDY  RA  YHKK+D LR L++KA  KNPDEFY+KM +
Sbjct: 13  QREHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTR 72

Query: 70  TRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATLHSLDNQ--P 129
            +  DGVH  +    + TAEQL LM+TQD  YI  K  +E +KIE+L + LH LD Q   
Sbjct: 73  AKLQDGVHIFKENKEEVTAEQLKLMRTQDIKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query: 130 SNKHIYFAEDREE------ANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRSR 189
             KH++F + ++E      A  +Q+       V +   + ++++++ +         +  
Sbjct: 133 QKKHVFFFDTKKEVERFDVATHLQTAPELVDRVYNRPRI-ETLQKERVKGATPQTGLKRI 192

Query: 190 VSELEKLYMDMTLQQEL-----------------MKKGRKRKLREDELTNPTSKSVYKWR 230
             E +K Y  +T + E                  M K +K K++++ + +P   ++Y+++
Sbjct: 193 AKERQKQYDCLTQRIEREKQLFVVAQKIQTRKDLMDKTQKVKVKKETVNSP---AIYRFQ 252

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BLAST of CmaCh12G009530 vs. Swiss-Prot
Match: UTP11_HUMAN (Probable U3 small nucleolar RNA-associated protein 11 OS=Homo sapiens GN=UTP11 PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 8.2e-24
Identity = 82/245 (33.47%), Postives = 135/245 (55.10%), Query Frame = 1


Query: 10  KRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIK 69
           +R ++ER+QP  RK  GLLEK KDY  RA  Y KK++ L+ L++KA  KNPDEFY+KM +
Sbjct: 13  QREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query: 70  TRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATLHSLDNQ--P 129
            +  DGVH  +    + T EQL LM+TQD  YI  K  +E +KIE+L + LH LD Q   
Sbjct: 73  VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query: 130 SNKHIYFAEDREE------ANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRSR 189
            NKH++F + ++E      A  +Q+       V +   + ++++++ +         +  
Sbjct: 133 QNKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRI-ETLQKEKVKGVTNQTGLKRI 192

Query: 190 VSELEKLYMDMT-----------------LQQELMKKGRKRKLREDELTNPTSKSVYKWR 230
             E +K Y  +T                  +++LM K +K K++++ + +P   ++YK++
Sbjct: 193 AKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSP---AIYKFQ 252

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BLAST of CmaCh12G009530 vs. TrEMBL
Match: A0A0A0LKH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074140 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.7e-106
Identity = 208/229 (90.83%), Postives = 221/229 (96.51%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVP+RPYKERAQP SRKKFGLLEKHKDY++RAKA+HKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAGYILQK+QSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDNQPSNKH+YFAEDREEANEI SRSSKG  VASSEAVPDSI+RKTISSYKELEARRS
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKG-LVASSEAVPDSIRRKTISSYKELEARRS 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV+ELEKLYMDMTLQQEL KKGRKRKLREDEL+NPT K VYKWRAERKR
Sbjct: 181 RVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228

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BLAST of CmaCh12G009530 vs. TrEMBL
Match: M5VL75_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010969mg PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 6.4e-92
Identity = 180/229 (78.60%), Postives = 208/229 (90.83%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+ +R +KERAQP SRKKFGLLEKHKDYVERAKAYHKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPESRKKFGLLEKHKDYVERAKAYHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMIKTRTV+GVH+ ESQ NKYT E+L+LMKTQD GYILQKVQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVNGVHKLESQANKYTQEELLLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDN+PS++H+YFAEDREEA EIQSRS  G ++ +SE +PD IKRKT SSY+ELEARR+
Sbjct: 121 HSLDNRPSSRHVYFAEDREEAKEIQSRSKSG-TMPASEDIPDHIKRKTASSYRELEARRN 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV+ELEK+Y DM +Q+EL KKGRKRKLREDE+  PTSK V+KWRAERKR
Sbjct: 181 RVNELEKIYTDMAMQKELQKKGRKRKLREDEVVCPTSKPVFKWRAERKR 228

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BLAST of CmaCh12G009530 vs. TrEMBL
Match: M5WIT3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010965mg PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.1e-91
Identity = 179/229 (78.17%), Postives = 207/229 (90.39%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+ +R +KERAQP SRKKFGLLEKHKDYVERAKAYHKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPESRKKFGLLEKHKDYVERAKAYHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMIKTRTVDGVH+ ESQ NKYT E+L+LMKTQD GYILQKVQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHKLESQANKYTPEELLLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDN+PS++H+YFAEDREEA EI SRS  G ++ +SE +PD IKRKT +SY+ELEARR+
Sbjct: 121 HSLDNRPSSRHVYFAEDREEAKEIHSRSKSG-TMPASEDIPDHIKRKTAASYRELEARRN 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV+ELEK+Y DM +Q+EL KKGRKRKLREDE+  PTSK V+KWRAERKR
Sbjct: 181 RVNELEKIYTDMAMQKELQKKGRKRKLREDEIVCPTSKPVFKWRAERKR 228

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BLAST of CmaCh12G009530 vs. TrEMBL
Match: A5B5S2_VITVI (U3 small nucleolar RNA-associated protein 11 OS=Vitis vinifera GN=VITISV_023155 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.6e-90
Identity = 174/229 (75.98%), Postives = 206/229 (89.96%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSS +NA+ +R YKERAQP+ RKKFGLLEKHKDYV RA+A+HKKE+ L+KLKEKAAF+NP
Sbjct: 1   MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMIKTRTVDGVHRPESQ NKY+ E+LMLMKTQD GY+LQKVQSEK+KIEKLTA L
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDNQP+N+H+Y+AEDREEA EIQ++SS+G ++ S + VP+ IKRKT +SY+ELE R+S
Sbjct: 121 HSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKRKTSASYRELETRKS 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV++LEKLYMDM LQ+EL K+GRKRKLREDE+  PTSK VYKWRAERKR
Sbjct: 181 RVNDLEKLYMDMALQKELQKRGRKRKLREDEIVCPTSKPVYKWRAERKR 229

[Close]

BLAST of CmaCh12G009530 vs. TrEMBL
Match: C5DB53_VITVI (U3 small nucleolar RNA-associated protein 11 OS=Vitis vinifera GN=VIT_08s0056g00160 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.5e-90
Identity = 173/229 (75.55%), Postives = 206/229 (89.96%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSS +NA+ +R YKERAQP+ RKKFGLLEKHKDYV RA+A+HKKE+ L+KLKEKAAF+NP
Sbjct: 1   MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMIKTRTVDGVHRPESQ NKY+ E+LMLMKTQD GY+LQKVQSEK+KIEKLTA L
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDNQP+N+H+Y+AEDREEA EIQ++SS+G ++ S + VP+ IKRKT +SY+ELE R++
Sbjct: 121 HSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKRKTSASYRELETRKN 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV++LEKLYMDM LQ+EL K+GRKRKLREDE+  PTSK VYKWRAERKR
Sbjct: 181 RVNDLEKLYMDMALQKELQKRGRKRKLREDEIACPTSKPVYKWRAERKR 229

[Close]

BLAST of CmaCh12G009530 vs. TAIR10
Match: AT3G60360.1 (AT3G60360.1 embryo sac development arrest 14)

HSP 1 Score: 279.3 bits (713), Expect = 2.2e-75
Identity = 141/229 (61.57%), Postives = 187/229 (81.66%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+P+  +KER+QP +RK+FG+LEKHKDY+ RA AYHKK++TL+ L++KAAFKNP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEF FKMI ++TVDG HRP+ +VNKY+AE+LM+MKTQD GY+ QK QSEK KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
               +Q S +H+Y+AEDREEA E++ +  + +S  S+  +P  IK+K   SY++LE R+S
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQ-GRSKSDISTVEIPKDIKKKMDRSYRDLEGRKS 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           R  +LEKLY DM++Q+EL KKGRKRKLR+DEL NP  K+VYKWRA+RKR
Sbjct: 181 RAKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228

[Close]

BLAST of CmaCh12G009530 vs. NCBI nr
Match: gi|659082535|ref|XP_008441892.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo])

HSP 1 Score: 394.8 bits (1013), Expect = 1.0e-106
Identity = 208/229 (90.83%), Postives = 222/229 (96.94%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVP+RPYKERAQP SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMI+TRTVDGVH+PES+VNKYTAEQLMLMKTQDAGYILQK+QSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESRVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDNQPSNKH+YFAEDREEANEI SRSSKG  VASSEAVPDSI+RKT++SYKELEARRS
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKG-LVASSEAVPDSIRRKTVASYKELEARRS 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RVSELEKLYMDMTLQQEL KKGRKRKLREDE+ NPTSK VYKWRAERKR
Sbjct: 181 RVSELEKLYMDMTLQQELRKKGRKRKLREDEVANPTSKPVYKWRAERKR 228

[Close]

BLAST of CmaCh12G009530 vs. NCBI nr
Match: gi|449470253|ref|XP_004152832.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 3.9e-106
Identity = 208/229 (90.83%), Postives = 221/229 (96.51%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVP+RPYKERAQP SRKKFGLLEKHKDY++RAKA+HKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAGYILQK+QSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDNQPSNKH+YFAEDREEANEI SRSSKG  VASSEAVPDSI+RKTISSYKELEARRS
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKG-LVASSEAVPDSIRRKTISSYKELEARRS 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV+ELEKLYMDMTLQQEL KKGRKRKLREDEL+NPT K VYKWRAERKR
Sbjct: 181 RVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228

[Close]

BLAST of CmaCh12G009530 vs. NCBI nr
Match: gi|659123034|ref|XP_008461455.1| (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 2.6e-94
Identity = 190/229 (82.97%), Postives = 206/229 (89.96%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           M SLKNAVP RPYKERAQ +SRKKFGLLEKHKDYVERAKAYHKKEDTL KLK+KA FKNP
Sbjct: 1   MKSLKNAVPTRPYKERAQLHSRKKFGLLEKHKDYVERAKAYHKKEDTLEKLKQKAVFKNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMI+TRTVDG+HRP   VNKYTAEQL+LMKTQ AGYIL K+QSE+RKIE+LTATL
Sbjct: 61  DEFYFKMIRTRTVDGIHRPGRLVNKYTAEQLLLMKTQGAGYILHKMQSEERKIERLTATL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDN+PSN+HIYFAEDR+EA+EIQS S KGR VASSEAV +SIKRKT +SYKELEARRS
Sbjct: 121 HSLDNEPSNEHIYFAEDRDEADEIQSCSPKGRLVASSEAVHNSIKRKTTASYKELEARRS 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV ELEKLY D+ LQQEL K GRKRKL EDEL+NPTS  VYKWRAERKR
Sbjct: 181 RVWELEKLYRDIRLQQELRKMGRKRKLWEDELSNPTSNPVYKWRAERKR 229

[Close]

BLAST of CmaCh12G009530 vs. NCBI nr
Match: gi|595793327|ref|XP_007200412.1| (hypothetical protein PRUPE_ppa010969mg [Prunus persica])

HSP 1 Score: 345.1 bits (884), Expect = 9.2e-92
Identity = 180/229 (78.60%), Postives = 208/229 (90.83%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+ +R +KERAQP SRKKFGLLEKHKDYVERAKAYHKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPESRKKFGLLEKHKDYVERAKAYHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMIKTRTV+GVH+ ESQ NKYT E+L+LMKTQD GYILQKVQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVNGVHKLESQANKYTQEELLLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDN+PS++H+YFAEDREEA EIQSRS  G ++ +SE +PD IKRKT SSY+ELEARR+
Sbjct: 121 HSLDNRPSSRHVYFAEDREEAKEIQSRSKSG-TMPASEDIPDHIKRKTASSYRELEARRN 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV+ELEK+Y DM +Q+EL KKGRKRKLREDE+  PTSK V+KWRAERKR
Sbjct: 181 RVNELEKIYTDMAMQKELQKKGRKRKLREDEVVCPTSKPVFKWRAERKR 228

[Close]

BLAST of CmaCh12G009530 vs. NCBI nr
Match: gi|595868212|ref|XP_007211987.1| (hypothetical protein PRUPE_ppa010965mg [Prunus persica])

HSP 1 Score: 344.4 bits (882), Expect = 1.6e-91
Identity = 179/229 (78.17%), Postives = 207/229 (90.39%), Query Frame = 1


Query: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+ +R +KERAQP SRKKFGLLEKHKDYVERAKAYHKKE+TLR+LKEKAAF+NP
Sbjct: 1   MSSLRNAISRRAHKERAQPESRKKFGLLEKHKDYVERAKAYHKKEETLRRLKEKAAFRNP 60

Query: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120
           DEFYFKMIKTRTVDGVH+ ESQ NKYT E+L+LMKTQD GYILQKVQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHKLESQANKYTPEELLLMKTQDIGYILQKVQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180
           HSLDN+PS++H+YFAEDREEA EI SRS  G ++ +SE +PD IKRKT +SY+ELEARR+
Sbjct: 121 HSLDNRPSSRHVYFAEDREEAKEIHSRSKSG-TMPASEDIPDHIKRKTAASYRELEARRN 180

Query: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 230
           RV+ELEK+Y DM +Q+EL KKGRKRKLREDE+  PTSK V+KWRAERKR
Sbjct: 181 RVNELEKIYTDMAMQKELQKKGRKRKLREDEIVCPTSKPVFKWRAERKR 228

The following BLAST results are available for this feature:

BLAST of CmaCh12G009530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UTP11_ORYSJ	5.1e-82	67.69	Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. jap...	[more]
UTP11_ARATH	3.9e-74	61.57	Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana GN...	[more]
UTP11_DICDI	1.2e-27	38.33	Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideu...	[more]
UTP11_MOUSE	4.8e-24	34.29	Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus GN=Utp11 P...	[more]
UTP11_HUMAN	8.2e-24	33.47	Probable U3 small nucleolar RNA-associated protein 11 OS=Homo sapiens GN=UTP11 P...	[more]

BLAST of CmaCh12G009530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKH7_CUCSA	2.7e-106	90.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074140 PE=4 SV=1	[more]
M5VL75_PRUPE	6.4e-92	78.60	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010969mg PE=4 SV=1	[more]
M5WIT3_PRUPE	1.1e-91	78.17	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010965mg PE=4 SV=1	[more]
A5B5S2_VITVI	1.6e-90	75.98	U3 small nucleolar RNA-associated protein 11 OS=Vitis vinifera GN=VITISV_023155 ...	[more]
C5DB53_VITVI	3.5e-90	75.55	U3 small nucleolar RNA-associated protein 11 OS=Vitis vinifera GN=VIT_08s0056g00...	[more]

BLAST of CmaCh12G009530 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60360.1	2.2e-75	61.57	embryo sac development arrest 14	[more]

BLAST of CmaCh12G009530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082535\|ref\|XP_008441892.1\|	1.0e-106	90.83	PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo]	[more]
gi\|449470253\|ref\|XP_004152832.1\|	3.9e-106	90.83	PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativu...	[more]
gi\|659123034\|ref\|XP_008461455.1\|	2.6e-94	82.97	PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo]	[more]
gi\|595793327\|ref\|XP_007200412.1\|	9.2e-92	78.60	hypothetical protein PRUPE_ppa010969mg [Prunus persica]	[more]
gi\|595868212\|ref\|XP_007211987.1\|	1.6e-91	78.17	hypothetical protein PRUPE_ppa010965mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007144	SSU_processome_Utp11

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

Vocabulary: **Cellular Component**
Term	Definition
GO:0032040	small-subunit processome

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0000741	karyogamy
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G009530.1	CmaCh12G009530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007144	Small-subunit processome, Utp11	PANTHER	PTHR12838	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11	coord: 2..229 score: 7.1E
IPR007144	Small-subunit processome, Utp11	PFAM	PF03998	Utp11	coord: 10..229 score: 7.1
None	No IPR available	unknown	Coil	Coil	coord: 106..126 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G009530	Cucsa.178610	Cucumber (Gy14) v1	cgycmaB0509
CmaCh12G009530	Csa2G074140	Cucumber (Chinese Long) v2	cmacuB165
CmaCh12G009530	ClCG11G010890	Watermelon (Charleston Gray)	cmawcgB148
CmaCh12G009530	CSPI02G07140	Wild cucumber (PI 183967)	cmacpiB166
CmaCh12G009530	CmoCh12G009530	Cucurbita moschata (Rifu)	cmacmoB177
CmaCh12G009530	Lsi11G008590	Bottle gourd (USVL1VR-Ls)	cmalsiB154
CmaCh12G009530	Cp4.1LG07g07900	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G009530	CsaV3_2G009570	Cucumber (Chinese Long) v3	cmacucB0193
CmaCh12G009530	Cla97C11G217050	Watermelon (97103) v2	cmawmbB172
CmaCh12G009530	Bhi06G000987	Wax gourd	cmawgoB0183
CmaCh12G009530	CsGy2G007350	Cucumber (Gy14) v2	cgybcmaB169
CmaCh12G009530	Carg22653	Silver-seed gourd	carcmaB0008

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G009530	Melon (DHL92) v3.6.1	cmamedB190
CmaCh12G009530	Silver-seed gourd	carcmaB0220
CmaCh12G009530	Cucurbita maxima (Rimu)	cmacmaB191
CmaCh12G009530	Cucurbita moschata (Rifu)	cmacmoB191
CmaCh12G009530	Melon (DHL92) v3.5.1	cmameB175
CmaCh12G009530	Cucurbita pepo (Zucchini)	cmacpeB175