Cucsa.151250 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.151250
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRetrotransposon protein, putative, unclassified
Locationscaffold01116 : 113952 .. 115371 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGTAGCAGTTGCAGTGAAGGATTATAGACCCAGAGTTCATCAGCTTAATTACCTTGTCTTCAAGGTAATTGCCAAGGGTTTAACAGAGAAATTCAAGAAGGTAATGCCATCCATTATCACTGACTCAGAGTTCATTCTTAGAAGGGAAGACAAATTTTGGATCCAATCCTTATTGCTAAAGAGGTGGTGAAGGAGTATAAGGCTAAAAAGAAGAAAGGGTGGATGCTTAAACTAGACCTTGAGAAAGCATTCAATTTTAGTTGATTGGGACTTCTTAGAAAAAACCTTGTGAAGCAAACAGTGTGAGCATAAATGGATTGGGCAGATAATGGGTTGTGTGAAGAACCCAAGATATTCCATCTTCATCAATGGAAGGCCGAGAGGGAGAGTTTTGGCTTCTGTGGGTATTCAGCAAGGAGATCCCTTATCCCCATTTCTTTTCCTCCCTGTGAGTGAAGTTTTGGGAGCACTAGTAGATAGACTTCATCAGAATGGGCTCTAAGAAGGATTTGTTGTTGGTAAAGAAAAAATTCATGTTTCCATTCATCAGTTCAAAGATGACACACTTTTATTTTGTACGTATGACAGCCCCATGCTCACAAAGTTAAAGGAAGTTGTAGAATTTAACGAATGGTGCTCAGGTCAGAGAATTTTACAAATGGTGTCAGAAGGTTAATTGGGATAAATCAGTATTATGTGACATTAATTTGGAAGATGTAGTTACCACGGCTGTAAGCTTGAAATGTAAGGTTGAACACCTGCCTTTTATTTACTTGGGCTTACCATTGGGAAGTTATCCAAAAAAACTTCTTTTTGGCAACCGTCGACAAGGTCCATGCTAAACTTGACAAATGGAAAAGATTCAAACTTTTCAGAGGATGACAAGCCACATTATGTAAGTCAGTATTATACAGTGTTCCTACTTATTTTATATCATCCTTCTTAATGCCCAAAGGAGTCACATGAACTAGAAAGAATTCTAAGAATTTTTTCTGGGAAGGTCATAATGGTAGTAAGATCAACCACCTTGTTAAGTGGGAAATAGTTAATAAATCTATTATTGAGGGTGGACTTGGGCTTGGAGGTTTCAAAGCAAAGAACCCAACTCTTCTTGCCAAATGGGGGTGGCGGTATTTCGAGGAAGAGCATTCTTTGTGGCATAAGGTGGTCAGGAGTATCTATGGTAAGGATATGTTTAATTGGCACACAAATGGAAAAGATGGAAAGAGTTCAGAAGTCCTTGGGTTAGCATCTCCCGAGCTTGGCTGAAAGTGGAAGCCTTAGCTAAATTCAAATTGGGAAACGGAAGACGGGTTGCATTTTGGATAAACACTTGGAAGGATGAGATTCCATTTAATATTAAGTTTCCTAGACTCAACATTGCCCTACTTCCAAAAGGATCAATAGCAAAGCATTGA

mRNA sequence

gaagtagcagttgcagtgaaggattatagacccagagttcatcagcttaattaccttgtcttcaaggtaattgccaagggtttaacagagaaattcaagaaggtaatgccatccattatcactgactcagagttcattcttagaagggaagacaaattttggatccaatccttattgctaaagaggtgcaaacagtgtgagcataaatggattgggcagataatgggttgtgtgaagaacccaagatattccatcttcatcaatggaaggccgagagggagagttttggcttctgtgggtattcagcaaggagatcccttatccccatttcttttcctccctgtgagtgaagttttgggagcactaaattctaagaattttttctgggaaggtcataatggtagtaagatcaaccaccttgttaagtgggaaatagttaataaatctattattgagggtggacttgggcttggaggtttcaaagcaaagaacccaactcttcttgccaaatgggggtggcggtatttcgaggaagagcattctttgtggcataaggtggtcaggagtatctatgccttagctaaattcaaattgggaaacggaagacgggttgcattttggataaacacttggaaggatgagattccatttaatattaagtttcctagactcaacattgccctacttccaaaaggatcaatagcaaagcattga

Coding sequence (CDS)

GAAGTAGCAGTTGCAGTGAAGGATTATAGACCCAGAGTTCATCAGCTTAATTACCTTGTCTTCAAGGTAATTGCCAAGGGTTTAACAGAGAAATTCAAGAAGGTAATGCCATCCATTATCACTGACTCAGAGTTCATTCTTAGAAGGGAAGACAAATTTTGGATCCAATCCTTATTGCTAAAGAGGTGCAAACAGTGTGAGCATAAATGGATTGGGCAGATAATGGGTTGTGTGAAGAACCCAAGATATTCCATCTTCATCAATGGAAGGCCGAGAGGGAGAGTTTTGGCTTCTGTGGGTATTCAGCAAGGAGATCCCTTATCCCCATTTCTTTTCCTCCCTGTGAGTGAAGTTTTGGGAGCACTAAATTCTAAGAATTTTTTCTGGGAAGGTCATAATGGTAGTAAGATCAACCACCTTGTTAAGTGGGAAATAGTTAATAAATCTATTATTGAGGGTGGACTTGGGCTTGGAGGTTTCAAAGCAAAGAACCCAACTCTTCTTGCCAAATGGGGGTGGCGGTATTTCGAGGAAGAGCATTCTTTGTGGCATAAGGTGGTCAGGAGTATCTATGCCTTAGCTAAATTCAAATTGGGAAACGGAAGACGGGTTGCATTTTGGATAAACACTTGGAAGGATGAGATTCCATTTAATATTAAGTTTCCTAGACTCAACATTGCCCTACTTCCAAAAGGATCAATAGCAAAGCATTGA

Protein sequence

EVAVAVKDYRPRVHQLNYLVFKVIAKGLTEKFKKVMPSIITDSEFILRREDKFWIQSLLLKRCKQCEHKWIGQIMGCVKNPRYSIFINGRPRGRVLASVGIQQGDPLSPFLFLPVSEVLGALNSKNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTLLAKWGWRYFEEEHSLWHKVVRSIYALAKFKLGNGRRVAFWINTWKDEIPFNIKFPRLNIALLPKGSIAKH*
Homology
[Close]
BLAST of Cucsa.151250 vs. Swiss-Prot
Match: RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.0e-08
Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 1 

Query: 111 LFLPVSEVLGALN--SKNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTLL 170
           + LP S +L  L+  S+ F W      K  HLVKW  V     EGGLG+   K+ N  L+
Sbjct: 56  ILLPQS-ILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALI 115

Query: 171 AKWGWRYFEEEHSLWHKVVRSIYALAKFKLGNGRRV---AFWINTWK 213
           +K GWR  +E++SLW  V++  Y + + +  + R +     W +TW+
Sbjct: 116 SKVGWRLLQEKNSLWTLVLQKKYHVGEIR--DSRWLIPKGSWSSTWR 159

[Close]
BLAST of Cucsa.151250 vs. TrEMBL
Match: A5BB51_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005401 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19
Identity = 55/128 (42.97%), Postives = 75/128 (58.59%), Query Frame = 1 

Query: 64  KQCEHKWIGQIMGCVKNPRYSIFINGRPRGRVLASVGIQQGDPLSPFLFLPVSEVLGALN 123
           K    KW   + GC+ +  ++I +NG  +G V AS G++QGDPLSPFLF  V++VL    
Sbjct: 725 KGFSQKWRSWMRGCLSSSSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLR--- 784

Query: 124 SKNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTLLAKWGWRYFEEEHSLW 183
                 EG    K +HL++WE+V++    GGLG G    +N  LL KW WR+  E   LW
Sbjct: 785 ------EG----KKDHLIRWEVVSRPKEMGGLGFGKTFMRNIALLGKWLWRFPRERRGLW 839

Query: 184 HKVVRSIY 192
           HKV+ SIY
Sbjct: 845 HKVIASIY 839

[Close]
BLAST of Cucsa.151250 vs. TrEMBL
Match: A5CA68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044119 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 58/192 (30.21%), Postives = 88/192 (45.83%), Query Frame = 1 

Query: 69  KWIGQIMGCVKNPRYSIFINGRPRGRVLASVGIQQGDPLSPFLFLPVSEVLGALNSK--- 128
           KW   + G + +  Y+I +NG  +G V AS  ++QGD LSPFLF  V +VL  +  K   
Sbjct: 227 KWRIWMRGRMSSVSYAILVNGNAKGWVKASRSLRQGDXLSPFLFTIVVDVLNRMMLKVXE 286

Query: 129 -----------------------------NFFWEGHNGSKINHLVKWEIVNKSIIEGGLG 188
                                        +F W G    K  HLV W+ V K  ++GGLG
Sbjct: 287 RXVLEGFXXDRNRIRIXASVAAKIERLQRDFLWSGVGKGKRYHLVSWDAVCKPRVKGGLG 346

Query: 189 LGGFKAKNPTLLAKWGWRYFEEEHSLWHKVVRSIY----ALAKFKLGNGRRVAFWINTWK 225
            G    +N   L KW W+   E  +LWH+ +  ++       +F +G+  R+ FW + W 
Sbjct: 347 FGKIPLRNRAHLGKWLWKSPRESTALWHQAIAQVFRDFSKYTRFVVGDXERIRFWEDLWW 406

[Close]
BLAST of Cucsa.151250 vs. TrEMBL
Match: A5C942_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012063 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 61/209 (29.19%), Postives = 89/209 (42.58%), Query Frame = 1 

Query: 69   KWIGQIMGCVKNPRYSIFINGRPRGRVLASVGIQQGDPLSPFLFLPVSEVLGAL------ 128
            KW+G +  C+ + ++S+ +NG P G   ++ G++QGDPLSP+LF+   EVL  L      
Sbjct: 983  KWVGWMWSCLSSAKFSVLVNGVPXGFFPSTKGLRQGDPLSPYLFVMGMEVLDVLIRRAVE 1042

Query: 129  ---------------NSKNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTL 188
                             ++F W G N     HLVKWE+V     +GGLGL      N  L
Sbjct: 1043 GGGGMPKVVVRRLEKVQRDFLWGGGNMEGKIHLVKWEVVCTDKDKGGLGLRKLAMLNKAL 1102

Query: 189  LAKWGWRYFEEEHSLWHKVVRSIYALAK-------------------------------- 225
            L KW WRY  ++ +LW +V++  Y                                    
Sbjct: 1103 LGKWIWRYACDKDNLWKQVIKVKYGQEGLGWRPKKANGAVGVGVWKEIWKESEWCWDNMI 1162

[Close]
BLAST of Cucsa.151250 vs. TrEMBL
Match: M5W794_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016462mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.7e-18
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 1 

Query: 125 KNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTLLAKWGWRYFEEEHSLWH 184
           +NF WEG    K  HLV+WE V KS  EGGLG+G  + +N  L AKW WR+  E +SLWH
Sbjct: 683 RNFLWEGLEDGKKCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPLESNSLWH 742

Query: 185 KVVRSIYALAK--FKLGNGRRVAFWINTWKDEIPFNIKFPRLN 226
           ++++S Y +    F +GNG ++ FW + W  E      FPRL+
Sbjct: 743 RIIKSKYGIDSNGFSVGNGEKIRFWEDLWLKEWILKNLFPRLS 785

[Close]
BLAST of Cucsa.151250 vs. TrEMBL
Match: M5W794_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016462mg PE=4 SV=1)

HSP 1 Score: 39.7 bits (91), Expect = 6.0e+00
Identity = 42/156 (26.92%), Postives = 74/156 (47.44%), Query Frame = 1 

Query: 3   AVAVKDYRPRVHQLNYLVFKVIAKGLTEKFKKVMPSIITDSE--FILRRE--DKFWIQSL 62
           +V V DYRP    L   ++KVI+K L  + ++V+ + I+ S+  F+ +R+  D   + + 
Sbjct: 390 SVKVTDYRPI--SLVTSLYKVISKVLASRLREVLGNTISQSQGAFVQKRQILDAVLVANE 449

Query: 63  LLKRCKQCEHKWIGQIMGCVKNPRYSIF-------INGRPRGRVLASVGIQQGDPLSPFL 122
           + +  ++ + K  G +        Y          +  R      A  G++Q DPLSPFL
Sbjct: 450 VAEEVRKQKRK--GLVFKIDFEKAYDHVEWNFVDDVLDRKGFGFRAFRGLRQRDPLSPFL 509

Query: 123 FLPVSEVLGAL-------NSKNFFWEGHNGSKINHL 141
           F  VS+VL  +       N  +    GH+  +++HL
Sbjct: 510 FTLVSDVLRRIIERAQDVNLVHGIVSGHDQVEVSHL 541


HSP 2 Score: 98.2 bits (243), Expect = 1.4e-17
Identity = 55/185 (29.73%), Postives = 84/185 (45.41%), Query Frame = 1 

Query: 69  KWIGQIMGCVKNPRYSIFINGRPRGRVLASVGIQQGDPLSPFLFLPVSEVLGALNS---- 128
           +W   + GC+    +++ +NG  +  V AS G++Q D +  F      E L  L S    
Sbjct: 102 RWRKWMRGCLSTVSFAVLVNGNAKRWVKASRGLRQDDTI--FFPNTCEEELQTLKSLLLV 161

Query: 129 ---------------------KNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAK 188
                                ++F W G    K +HLV W++V  S  +GGLG G    +
Sbjct: 162 FGHISGLKIPVSVAAKIERLQRDFLWSGVEEGKRDHLVSWDVVCNSKAKGGLGFGKISLR 221

Query: 189 NPTLLAKWGWRYFEEEHSLWHKVVRSIY----ALAKFKLGNGRRVAFWINTWKDEIPFNI 225
           N  LL KW WRY  E  +LWH+ +  ++       +F +GNG R+ FW + W    P   
Sbjct: 222 NLALLGKWLWRYPREGSALWHQAIAQVFQEFSKYTRFVVGNGERIRFWEDLWWGGQPMGS 281

[Close]
BLAST of Cucsa.151250 vs. NCBI nr
Match: gi|658048925|ref|XP_008360144.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica])

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-20
Identity = 63/148 (42.57%), Postives = 75/148 (50.68%), Query Frame = 1 

Query: 111 LFLPVSEVLGALNS--KNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTLL 170
           LF     V+G L    K F WEG    K N+LVKWEIV KS  EGGLG+G  + +N  LL
Sbjct: 336 LFKMPCGVIGRLEKLMKGFLWEGVEEGKKNNLVKWEIVIKSKEEGGLGVGNLRNRNEALL 395

Query: 171 AKWGWRYFEEEHSLWHKVVRSIYAL--------------------------------AKF 225
           AKW WR+ +E HSLWHKV+RS Y L                                 KF
Sbjct: 396 AKWLWRFPKEPHSLWHKVIRSKYGLQDNGWNAFPPIRGSXRSPWKDISIGSQLFLHCCKF 455

[Close]
BLAST of Cucsa.151250 vs. NCBI nr
Match: gi|658048925|ref|XP_008360144.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica])

HSP 1 Score: 67.8 bits (164), Expect = 3.0e-08
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 1 

Query: 64  KQCEHKWIGQIMGCVKNPRYSIFINGRPRGRVLASVGIQQGDPLSPFLFLPVSEVLGALN 123
           K   ++W   + GC+ +  +S+ INGRPRG+  AS G++QGDPLSPFLF  V +VL  L 
Sbjct: 126 KSFGNRWRKWMQGCLSSANFSVLINGRPRGKFQASRGLRQGDPLSPFLFTLVVDVLSRLM 185

Query: 124 SKNFFWEGHNGSKINHLVKWEIVNKSIIE 153
            K         ++ NHL+K   + +  +E
Sbjct: 186 EK---------AQENHLIKGLCIGQEKVE 205


HSP 2 Score: 109.0 bits (271), Expect = 1.2e-20
Identity = 63/148 (42.57%), Postives = 75/148 (50.68%), Query Frame = 1 

Query: 111  LFLPVSEVLGALNS--KNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTLL 170
            LF     V+G L    K F WEG    K N+LVKWEIV KS  EGGLG+G  + +N  LL
Sbjct: 1359 LFKMPCGVIGRLEKLMKGFLWEGVEEGKKNNLVKWEIVIKSKEEGGLGVGNLRNRNEALL 1418

Query: 171  AKWGWRYFEEEHSLWHKVVRSIYAL--------------------------------AKF 225
            AKW WR+ +E HSLWHKV+RS Y L                                 KF
Sbjct: 1419 AKWLWRFPKEPHSLWHKVIRSKYGLQDNGWNAFPPIRGSSRSPWKDISIGSQLFLHCCKF 1478

[Close]
BLAST of Cucsa.151250 vs. NCBI nr
Match: gi|658030603|ref|XP_008350747.1| (PREDICTED: uncharacterized protein LOC103414113 [Malus domestica])

HSP 1 Score: 67.8 bits (164), Expect = 3.0e-08
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 1 

Query: 64   KQCEHKWIGQIMGCVKNPRYSIFINGRPRGRVLASVGIQQGDPLSPFLFLPVSEVLGALN 123
            K   ++W   + GC+ +  +S+ INGRPRG+  AS G++QGDPLSPFLF  V +VL  L 
Sbjct: 1149 KSFGNRWRKWMQGCLSSANFSVLINGRPRGKFQASRGLRQGDPLSPFLFTLVVDVLSRLM 1208

Query: 124  SKNFFWEGHNGSKINHLVKWEIVNKSIIE 153
             K         ++ NHL+K   + +  +E
Sbjct: 1209 EK---------AQENHLIKGLCIGQEKVE 1228


HSP 2 Score: 108.2 bits (269), Expect = 2.0e-20
Identity = 63/148 (42.57%), Postives = 74/148 (50.00%), Query Frame = 1 

Query: 111 LFLPVSEVLGALNS--KNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTLL 170
           LF     V+G L    K F WEG    K N+LVKWEIV KS  EGGLG+G  + +N  LL
Sbjct: 130 LFKMPCGVIGRLEKLMKGFLWEGVEEGKKNNLVKWEIVIKSKEEGGLGVGNLRNRNEALL 189

Query: 171 AKWGWRYFEEEHSLWHKVVRSIYAL--------------------------------AKF 225
           AKW WR+  E HSLWHKV+RS Y L                                 KF
Sbjct: 190 AKWLWRFPXEPHSLWHKVIRSKYGLQDNGWNAFPXIRGSSRSPWKDISIGSQLFLHCCKF 249

[Close]
BLAST of Cucsa.151250 vs. NCBI nr
Match: gi|147781741|emb|CAN69951.1| (hypothetical protein VITISV_005401 [Vitis vinifera])

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-19
Identity = 55/128 (42.97%), Postives = 75/128 (58.59%), Query Frame = 1 

Query: 64  KQCEHKWIGQIMGCVKNPRYSIFINGRPRGRVLASVGIQQGDPLSPFLFLPVSEVLGALN 123
           K    KW   + GC+ +  ++I +NG  +G V AS G++QGDPLSPFLF  V++VL    
Sbjct: 725 KGFSQKWRSWMRGCLSSSSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLR--- 784

Query: 124 SKNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTLLAKWGWRYFEEEHSLW 183
                 EG    K +HL++WE+V++    GGLG G    +N  LL KW WR+  E   LW
Sbjct: 785 ------EG----KKDHLIRWEVVSRPKEMGGLGFGKTFMRNIALLGKWLWRFPRERRGLW 839

Query: 184 HKVVRSIY 192
           HKV+ SIY
Sbjct: 845 HKVIASIY 839

[Close]
BLAST of Cucsa.151250 vs. NCBI nr
Match: gi|657990185|ref|XP_008387315.1| (PREDICTED: uncharacterized protein LOC103449768 [Malus domestica])

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-19
Identity = 62/148 (41.89%), Postives = 73/148 (49.32%), Query Frame = 1 

Query: 111  LFLPVSEVLGALNS--KNFFWEGHNGSKINHLVKWEIVNKSIIEGGLGLGGFKAKNPTLL 170
            LF     V+G L    K F WEG    K N+LVKWEIV KS  EGGLG+G  + +N  LL
Sbjct: 1810 LFKMPCGVIGRLEKLMKGFLWEGVEEGKKNNLVKWEIVIKSKEEGGLGVGNLRNRNEALL 1869

Query: 171  AKWGWRYFEEEHSLWHKVVRSIYAL--------------------------------AKF 225
            AKW WR+  E HSLWHKV+RS Y L                                 KF
Sbjct: 1870 AKWLWRFPXEPHSLWHKVIRSKYGLQDNGWNAFPPIRGSSRSPWKDISIGSQLFLHCCKF 1929

The following BLAST results are available for this feature:
BLAST of Cucsa.151250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNHX1_ARATH5.0e-0834.58Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 P... [more]
BLAST of Cucsa.151250 vs. TrEMBL
Match NameE-valueIdentityDescription
A5BB51_VITVI1.2e-1942.97Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005401 PE=4 SV=1[more]
A5CA68_VITVI1.3e-1830.21Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044119 PE=4 SV=1[more]
A5C942_VITVI2.2e-1829.19Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012063 PE=4 SV=1[more]
M5W794_PRUPE3.7e-1844.66Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016462mg PE=4 S... [more]
M5W794_PRUPE6.0e+0026.92Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016462mg PE=4 S... [more]
BLAST of Cucsa.151250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|658048925|ref|XP_008360144.1|1.2e-2042.57PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica][more]
gi|658048925|ref|XP_008360144.1|3.0e-0839.33PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica][more]
gi|658030603|ref|XP_008350747.1|3.0e-0839.33PREDICTED: uncharacterized protein LOC103414113 [Malus domestica][more]
gi|147781741|emb|CAN69951.1|1.7e-1942.97hypothetical protein VITISV_005401 [Vitis vinifera][more]
gi|657990185|ref|XP_008387315.1|1.7e-1941.89PREDICTED: uncharacterized protein LOC103449768 [Malus domestica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.151250.1Cucsa.151250.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.151250Cucurbita maxima (Rimu)cgycmaB0416
Cucsa.151250Cucurbita moschata (Rifu)cgycmoB0416
Cucsa.151250Wild cucumber (PI 183967)cgycpiB223
Cucsa.151250Cucumber (Chinese Long) v2cgycuB218
Cucsa.151250Cucumber (Chinese Long) v3cgycucB229