Cucsa.149430 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCCGAACCAAATGGCGATGGCAATGCGCTGTTCTTGCTTCCTTTCCCGCCTCAATTCCCcTCCATCTCCTTCCTCCCATCACCTATCCAGGAGCCTCCATCTTTCCGGTTAGTGTTTTTCTACTTTCATGCACTTTTCTTCCTTTTTCCTCTTCTCCATTTCCTGATGTTCCCTCACTTTTAGCTCCAGGTTTTTGTTTCTTTCAATTGCGGAACCACCTCTTTCTCCACTGCTAATTAGGGTTTCAACCATTCTCCAAACTAGTTCTTATATTTCTAGTATAAGTTCAAGTAAACAATTGAGTAATGTTTTGTCTCGTTGGAGTTCTTGACAGCGAGCTTTCGTTAAGTGGGTAACTCTTGAAATGGGGAAATTGGATTCAATTTCAATACAATTCTGCATTACATTTCGACTTTGAAGTGTTGTTTCTCTTAAATCACCTATTCAACCCAAACGCTTAAGCCAGTGGGTGATGGTAAATTTAATTTTATATATATCACAACACTCCTTTCACTTCACTTGTGACTTGAATTTTAATTAGGGAGGAAACAATAAGTGATTTAATCGAAAAAACTTAAGCGAGTGGGTGAAGATAGATTTAGTTATATATCACAACCGTAGATTTAGTTATATATCACAACCGTTTGTTCTTGTGGCAGGGAAAGTACCTCATGTTGCAATTAATGTGGACAATTTTGTTAAATTTTGTGGGGAAAGCATCCTCAGACCACTTCAGATACAGAATGCTTTGCCCGTTATAAAATGTCAGGTATGATGGTGAGTTTCCTGCTGATCAGCTTTGAGTTTAGTAGAACTGCATTGTGATAACTTCTAGTTTTTTTtTTTTtCTTAAGATTTTCAGTTAATGAGAACTTCCTAGTGAGTGTTATATTTAGATATAAACATTATATGAAGATTTGAACTGCTTCTGCATTTGCTTAACGATTATTATTATTACGGTTTCCCAAATAAAAaTATGATCTGGGGACTCTCCTAAGTGTGGAAATTTCAAGAGTTAGAATTGCACTGGAAACATGTAAGGGGAGTTATATTAGGGTTTGATTCCATTTCACTGTGTCATATTTATTAGAATTTTTTGGCCAATGGTATATGGTGTTGATTTTTGTTGATAAATCTTTCTTTGGCAGGGAAATATTGAGACAAGATTTCCAGTTATGGCGTTTCTCTTGGCTAATGTTTTTACATTTTCGGTACCATTGAAAGCTATGGCTGAAACATGCGAGGCTGAGAGTTCTGCTTTCAATATGCCAATACTTCTTGCTGTTGCCCTTGTAGGGGCCACTGTTGGAGGTAAAACTCCTTGATTTGTTGTAATGTAGGACGGTAATTACTTGATCATTTGTATAGGCATTTATCTCTCAGTAGTCTAGAGAGAAACTTAAAGACTGGCTTTTGATCCTTGTGCGCAGCATTGTTCTTTTTAACTTCATTTTTTCTATAACAAAAGTTTTGACGAGGTGGGAGTGAGAAGGGTAATGGTAAGCAGTCTACTCCACTCTAAAATTCCCCATTGAATGCCAAATAAAGACTGTTGATTCTTTCATTTATGGCCAGTTGCAGTTGTCTAAAATGTTGGATAAATTTGGATGATAAGTAATTTGGTTTCACTCTCACTATTTAACTTCTACTATATCCCAAAGTATTTATTCTTCATTATATCTTGTCAAAAGTTTACATTTCTAGTTTGAACTAGAAATATAAATTGTGTCAAACTTATAAGCCTTTTAATAGGGTTGCTTGCTCGGCAAAGAAGGGGAGAATTGAAGCGGTTAAATGAACAACTTCGCCAGATTAATGCTGCACTAAGAAGGCAAGCAAAGATTGAGTCTTATGCTCCCACCTTAAGTTATGCTCCTGTTGGTGGAAGAATACTCGAGAATGAAGTTATTGTTGATCCGAGGAAGGAGGACTTGATCTCTCGATTGAAGTCCGGAAAGAACTTTTTGAGAAATCAAGATCCAGAAAAGGCATTTGTGGAGTTTAAGACTGCTCTTGAGCTTGCTCAGGGTCTACAGGACCCAATTGAGGAGAAGAAGGCTGCAAGGGGTTTAGGTTTGTTTTCTCTCTTATTTAACTACTTGCTTCTTATATTTCTTAAAAGACGCAGCACATTTTGATTGTTAAAATAAAATCACCTACTTATTGATATCAGTTTCGAGCCGTTTGGCAAAGTTACCCACGTGCATTTTAAATATACCTTAGAGTTCTGCCTTTTCTTTAATCAAGGCCAGTAACCTGCTTCCTGTTCTTGTTCCTTCTATAAAAGCACTGAGAATATTTGTAATTCTAAGTTGGCAGTGCCAAAAGATCTTGAACAATGCTATGTTCATTGAATTCAAGGCCTTAAAAACCACCACATGGAACCCTTAATTCTCAGCATATATCTCATCTTCTTGTACACAAAGCTGCATTCTTGCTTTTCACAATCAATAAGTCCCTACGGAAATGCATTCTCATGGAGGAAGCTCTGTTGTAGGAAGTGTAGGCCTTCTTCTGTAAGATGTATGAGTTACTCATGTATCAAATGAAGAACCGACCTTGAGATTTAAGACCTGTCTCGAAAGCCTTCCAAAATGAACTTCAATACAAATTGCAAAGGTTATGCACCTAGAAATAGCTCACAATAGGAATGTTGCTTATGATGATCAATGCATATGTTTTTTGCACAGCCTTGTTTCCCCCATCAACTGCAATAATTTGACACAAAATGGGAATGGATTTTGCAGGGGCTTCACTGCAGCGGCAGGGAAAGTACCGAGAAGCAATCAAATACCATTCAATGGTTTTGGCAATCTCTGAACGAGAAGGAGAACAATCAGGGAATACTGAAGCTTTTGGAGCAATTGCTGATTGTTACACTGAACTAGGCGATCTTGAAAAAGCTGCTTACTTTTATGACAAGTACATAGCGAGGCTGGAAACAGATTGATGTATTTGGAACCGTCAGTAGTTGTTTGTTTACTTCATAATGTAGCCAAGTACAGTACAAGGTGTTCGTCATGGTTGGTAACTTTATATGCGGAAGAATTAGCTATTCGTATGTAGATGTTGAGTTGAGAATAATTGTAGAATCGTGTCATTCTCTATGTTTATTCCATTAAAATGATTTTTCGAAATAGTGCTTTCATCTTTTTGGGAATATTGGTCGAGTCCTTCCTATTTAAAGTATTTTAGATATTTTTAATGCATAAACTTTAATCCATATCAA TATCCGAACCAAATGGCGATGGCAATGCGCTGTTCTTGCTTCCTTTCCCGCCTCAATTCCCCTCCATCTCCTTCCTCCCATCACCTATCCAGGAGCCTCCATCTTTCCGGGAAAGTACCTCATGTTGCAATTAATGTGGACAATTTTGTTAAATTTTGTGGGGAAAGCATCCTCAGACCACTTCAGATACAGAATGCTTTGCCCGTTATAAAATGTCAGGGAAATATTGAGACAAGATTTCCAGTTATGGCGTTTCTCTTGGCTAATGTTTTTACATTTTCGGTACCATTGAAAGCTATGGCTGAAACATGCGAGGCTGAGAGTTCTGCTTTCAATATGCCAATACTTCTTGCTGTTGCCCTTGTAGGGGCCACTGTTGGAGGGTTGCTTGCTCGGCAAAGAAGGGGAGAATTGAAGCGGTTAAATGAACAACTTCGCCAGATTAATGCTGCACTAAGAAGGCAAGCAAAGATTGAGTCTTATGCTCCCACCTTAAGTTATGCTCCTGTTGGTGGAAGAATACTCGAGAATGAAGTTATTGTTGATCCGAGGAAGGAGGACTTGATCTCTCGATTGAAGTCCGGAAAGAACTTTTTGAGAAATCAAGATCCAGAAAAGGCATTTGTGGAGTTTAAGACTGCTCTTGAGCTTGCTCAGGGTCTACAGGACCCAATTGAGGAGAAGAAGGCTGCAAGGGGTTTAGGGGCTTCACTGCAGCGGCAGGGAAAGTACCGAGAAGCAATCAAATACCATTCAATGGTTTTGGCAATCTCTGAACGAGAAGGAGAACAATCAGGGAATACTGAAGCTTTTGGAGCAATTGCTGATTGTTACACTGAACTAGGCGATCTTGAAAAAGCTGCTTACTTTTATGACAAGTACATAGCGAGGCTGGAAACAGATTGATGTATTTGGAACCGTCAGTAGTTGTTTGTTTACTTCATAATGTAGCCAAGTACAGTACAAGGTGTTCGTCATGGTTGGTAACTTTATATGCGGAAGAATTAGCTATTCGTATGTAGATGTTGAGTTGAGAATAATTGTAGAATCGTGTCATTCTCTATGTTTATTCCATTAAAATGATTTTTCGAAATAGTGCTTTCATCTTTTTGGGAATATTGGTCGAGTCCTTCCTATTTAAAGTATTTTAGATATTTTTAATGCATAAACTTTAATCCATATCAA ATGGCGATGGCAATGCGCTGTTCTTGCTTCCTTTCCCGCCTCAATTCCCcTCCATCTCCTTCCTCCCATCACCTATCCAGGAGCCTCCATCTTTCCGGGAAAGTACCTCATGTTGCAATTAATGTGGACAATTTTGTTAAATTTTGTGGGGAAAGCATCCTCAGACCACTTCAGATACAGAATGCTTTGCCCGTTATAAAATGTCAGGGAAATATTGAGACAAGATTTCCAGTTATGGCGTTTCTCTTGGCTAATGTTTTTACATTTTCGGTACCATTGAAAGCTATGGCTGAAACATGCGAGGCTGAGAGTTCTGCTTTCAATATGCCAATACTTCTTGCTGTTGCCCTTGTAGGGGCCACTGTTGGAGGGTTGCTTGCTCGGCAAAGAAGGGGAGAATTGAAGCGGTTAAATGAACAACTTCGCCAGATTAATGCTGCACTAAGAAGGCAAGCAAAGATTGAGTCTTATGCTCCCACCTTAAGTTATGCTCCTGTTGGTGGAAGAATACTCGAGAATGAAGTTATTGTTGATCCGAGGAAGGAGGACTTGATCTCTCGATTGAAGTCCGGAAAGAACTTTTTGAGAAATCAAGATCCAGAAAAGGCATTTGTGGAGTTTAAGACTGCTCTTGAGCTTGCTCAGGGTCTACAGGACCCAATTGAGGAGAAGAAGGCTGCAAGGGGTTTAGGGGCTTCACTGCAGCGGCAGGGAAAGTACCGAGAAGCAATCAAATACCATTCAATGGTTTTGGCAATCTCTGAACGAGAAGGAGAACAATCAGGGAATACTGAAGCTTTTGGAGCAATTGCTGATTGTTACACTGAACTAGGCGATCTTGAAAAAGCTGCTTACTTTTATGACAAGTACATAGCGAGGCTGGAAACAGATTGA MAMAMRCSCFLSRLNSPPSPSSHHLSRSLHLSGKVPHVAINVDNFVKFCGESILRPLQIQNALPVIKCQGNIETRFPVMAFLLANVFTFSVPLKAMAETCEAESSAFNMPILLAVALVGATVGGLLARQRRGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRILENEVIVDPRKEDLISRLKSGKNFLRNQDPEKAFVEFKTALELAQGLQDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLAISEREGEQSGNTEAFGAIADCYTELGDLEKAAYFYDKYIARLETD*
BLAST of Cucsa.149430 vs. Swiss-Prot
Match: FLU_ARATH (Protein FLUORESCENT IN BLUE LIGHT, chloroplastic OS=Arabidopsis thaliana GN=FLU PE=1 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 1.4e-92 Identity = 174/224 (77.68%), Postives = 198/224 (88.39%), Query Frame = 1
BLAST of Cucsa.149430 vs. Swiss-Prot
Match: TTC28_HUMAN (Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1 SV=4) HSP 1 Score: 53.1 bits (126), Expect = 5.9e-06 Identity = 27/92 (29.35%), Postives = 49/92 (53.26%), Query Frame = 1
HSP 2 Score: 52.0 bits (123), Expect = 1.3e-05 Identity = 30/93 (32.26%), Postives = 49/93 (52.69%), Query Frame = 1
HSP 3 Score: 47.0 bits (110), Expect = 4.2e-04 Identity = 26/90 (28.89%), Postives = 46/90 (51.11%), Query Frame = 1
HSP 4 Score: 37.4 bits (85), Expect = 3.4e-01 Identity = 29/106 (27.36%), Postives = 46/106 (43.40%), Query Frame = 1
BLAST of Cucsa.149430 vs. Swiss-Prot
Match: TTC28_MOUSE (Tetratricopeptide repeat protein 28 OS=Mus musculus GN=Ttc28 PE=1 SV=3) HSP 1 Score: 52.8 bits (125), Expect = 7.7e-06 Identity = 27/92 (29.35%), Postives = 49/92 (53.26%), Query Frame = 1
HSP 2 Score: 48.9 bits (115), Expect = 1.1e-04 Identity = 28/93 (30.11%), Postives = 49/93 (52.69%), Query Frame = 1
HSP 3 Score: 47.0 bits (110), Expect = 4.2e-04 Identity = 26/90 (28.89%), Postives = 46/90 (51.11%), Query Frame = 1
HSP 4 Score: 47.0 bits (110), Expect = 4.2e-04 Identity = 25/85 (29.41%), Postives = 45/85 (52.94%), Query Frame = 1
HSP 5 Score: 37.0 bits (84), Expect = 4.4e-01 Identity = 29/106 (27.36%), Postives = 46/106 (43.40%), Query Frame = 1
BLAST of Cucsa.149430 vs. TrEMBL
Match: A0A0A0L9E8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G645960 PE=4 SV=1) HSP 1 Score: 582.8 bits (1501), Expect = 2.4e-163 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 1
BLAST of Cucsa.149430 vs. TrEMBL
Match: W9S9G7_9ROSA (Protein FLUORESCENT IN BLUE LIGHT OS=Morus notabilis GN=L484_008157 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 7.1e-107 Identity = 208/300 (69.33%), Postives = 237/300 (79.00%), Query Frame = 1
BLAST of Cucsa.149430 vs. TrEMBL
Match: G7L8A8_MEDTR (Fluorescent IN BLUE LIGHT protein OS=Medicago truncatula GN=MTR_8g022040 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 4.6e-106 Identity = 203/298 (68.12%), Postives = 242/298 (81.21%), Query Frame = 1
BLAST of Cucsa.149430 vs. TrEMBL
Match: I3T9T1_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 7.8e-106 Identity = 203/298 (68.12%), Postives = 241/298 (80.87%), Query Frame = 1
BLAST of Cucsa.149430 vs. TrEMBL
Match: A0A061GBR8_THECC (Tetratricopeptide repeat-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_029180 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.5e-104 Identity = 220/330 (66.67%), Postives = 244/330 (73.94%), Query Frame = 1
BLAST of Cucsa.149430 vs. TAIR10
Match: AT3G14110.3 (AT3G14110.3 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 340.9 bits (873), Expect = 8.0e-94 Identity = 174/224 (77.68%), Postives = 198/224 (88.39%), Query Frame = 1
BLAST of Cucsa.149430 vs. TAIR10
Match: AT3G16760.1 (AT3G16760.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06 Identity = 22/58 (37.93%), Postives = 37/58 (63.79%), Query Frame = 1
BLAST of Cucsa.149430 vs. NCBI nr
Match: gi|449453383|ref|XP_004144437.1| (PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X1 [Cucumis sativus]) HSP 1 Score: 582.8 bits (1501), Expect = 3.4e-163 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 1
BLAST of Cucsa.149430 vs. NCBI nr
Match: gi|659120719|ref|XP_008460321.1| (PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 558.9 bits (1439), Expect = 5.3e-156 Identity = 283/297 (95.29%), Postives = 290/297 (97.64%), Query Frame = 1
BLAST of Cucsa.149430 vs. NCBI nr
Match: gi|659120721|ref|XP_008460322.1| (PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 504.6 bits (1298), Expect = 1.2e-139 Identity = 256/267 (95.88%), Postives = 264/267 (98.88%), Query Frame = 1
BLAST of Cucsa.149430 vs. NCBI nr
Match: gi|778682449|ref|XP_011651714.1| (PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 442.6 bits (1137), Expect = 5.5e-121 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1
BLAST of Cucsa.149430 vs. NCBI nr
Match: gi|659120723|ref|XP_008460323.1| (PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X3 [Cucumis melo]) HSP 1 Score: 437.2 bits (1123), Expect = 2.3e-119 Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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