Carg27124 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27124
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein fluorescent in blue light, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_410 : 50760 .. 52980 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGGCGACAGCGATGCCAATGCGTTGCTCTTGCTTTCTTTCCCGCCCGAAAAATTCTCCGCGATCTCCTCCCTCCGATCAGTTAACTAGGAAACTCCATTTTTCCGGTTAGTATTACGGTGTTTGTATAATCTTTTCTTTGTTTTTCGTCTACTCTCATTCCTTTTGAAGTTGATTTCTACTGGATGATGCTCCGAAGCTTTTAGCTCCAGGTTTTGATGCCTTGAGTTACGGAACATGTTCTATTATGGGGGAAATGGGATTCAACGCAATTGTACGTTACATTTTAGCTTTAAGAGTTGTATGTTTTCATTTATGGCAGGGAAAATGCCTCATGGTTCAGTTAATGTGGGCAATTTTGTTACATTTTGTGGAGACAGCATCGTCACACCATCTGGGAGACAGAATTCGTTGCCGGTTCTAAAATGTCAGGTATGATGGTGAGTTTCCTGCTCATCGGTTATGAGTATGGTACACTTATATTGTGATAACTCTCGCTGCTTCGTTTTATACTATAATTTTTAGATAAAACATGATATGAACATTGCTACTGCACTTATTTAACTATAATCTGGGACTTTGATGAGTGGAAATTACAAGTGTTAGAAGTACTGGAAACAAGTTAGGGGAATTTCATTAGGGTTTGATTTCATTCCACTATTTGTTATGTTTATTGAAAAGAAATTTGATCAATGGAATATGATGGTGTTTTCTGCTGATAAATTTATTCTTGGCAGGGAAATAATGAGACAAAATTTCCAGTTATGGCGTTTCTGTTAGCTAATGTATTTACATTTTCCGTACCATTGAAAGTTTTGGCTGAAACATGCGAGGCTGAGAATTCTGCTTTCAACATGCCAATCCTTCTTTCTGTCTCCCTTATAGGGGCCACTGTTGGAGGTAAGACTCCTTGATCTGATGCTACGTAGGGCAGTAATCACTTCATCATTTATATAGGTATTTATCTCTTAGTAATCTAGCAGAGAAACTTAATCAAGACTGAGCTTTTGATCCTTATTCGCTTAATAATTTTTCCCCTTCATTTTTATTGGTTTTGGCGGGGTAGGAATGAAAAGGGGAATGTTAAGCAGTATTCCTCGCTCTAGAATTGCCTATTCAATGCCAAATAAAGACCGCTGGTTCTTCCAGTTATGGCCAAATTGTGTTGTATACAAGGTTGGATAAAATGTGGATGAGAAGTATTGATGGGGTCTGTTACGAAAAACTTGGGATTTTATCTAAAAATCTTCCTAAAGAACGAGATCTCTAGATCTAAATTATCCAAGAATCTTAAAAACGATAAGAATCAACCTAAGGGAAAGTTTTAGGACGGATTACCTTGATGATCAAGATCAAAAGTAAAGAAAACCTCTTTTTAAACTTTGATTCGAATCACTCCACAAGATAGTTTGATCAAAACTACTTGAATGACTCTAGCATGCAAATCTAAGTACAAGAAATGCAACGGAACAAGCTCATGGCTTAAGAAGCATAATATGCAACTTTCATTATGATATCCAAAATCTTCGTACTAAAACAACAACAACGTGAACGACTATTTATAGCCTTGAAAATAAACCTTATGGTAACTTATGGCTAATTGAAAGGTTGTAACTTTCATGGTCATCAATACCGTAATAGCCACTAGCTAATTGTACCTTATAATTTTAAATACAGCATGTATGGATCTTGTCATCCACAGTGAAATCTTTGTAGCATAATTAAGACACCTTATTTCATATAAGTGTTACTATTAAAATTTCTACAGTAACCCATAGTACATAGTAATTATCCTAGTAATATCTTGTGAAAATTTTTCATTTCTAGTTTGAATTGGGAATATAAAGCTTGTCTAGTTTACAATACTTTTAACAGGATTGCTTGCTCGACAAAGAAAGGGAGAACTGAAACGGTTAAATGAACAACTTCGCCAGATTAATGCGGCATTAAGAAGGCAAGCAAAGATTGAGTCTTATGCTCCCACCTTAAGTTATGCTCCTGTTGGTGGAAGAACATCGAGAGTTGATGTAATTGTTGATCCAAGGAAGGAGGAGTTAATCTCTCGATTGAAGATCTGGGAAAGAAACTTTTTGAGGAAAATCAAGACACAGAGAAAGCATTCTCTGGATTTTAATGCTGCTCTTGAGCTTGCTCAGGGTCTGCAGGATCCGATAAAGGAGAAAGAAGGCTGCAAGGGCTTAGTTTGTTTTCTATAA

mRNA sequence

ATGGCGATGGCGACAGCGATGCCAATGCGTTGCTCTTGCTTTCTTTCCCGCCCGAAAAATTCTCCGCGATCTCCTCCCTCCGATCAGTTAACTAGGAAACTCCATTTTTCCGGGAAAATGCCTCATGGTTCAGTTAATGTGGGCAATTTTGTTACATTTTGTGGAGACAGCATCGTCACACCATCTGGGAGACAGAATTCGTTGCCGGTTCTAAAATGTCAGGGAAATAATGAGACAAAATTTCCAGTTATGGCGTTTCTGTTAGCTAATGTATTTACATTTTCCGTACCATTGAAAGTTTTGGCTGAAACATGCGAGGCTGAGAATTCTGCTTTCAACATGCCAATCCTTCTTTCTGTCTCCCTTATAGGGGCCACTGTTGGAGGATTGCTTGCTCGACAAAGAAAGGGAGAACTGAAACGGTTAAATGAACAACTTCGCCAGATTAATGCGGCATTAAGAAGGCAAGCAAAGATTGAGTCTTATGCTCCCACCTTAAGTTATGCTCCTGTTGGTGGAAGAACATCGAGAGTTGATGTAATTGTTGATCCAAGGAAGGAGGAGTTAATCTCTCGATTGAAGATCTGGGAAAGAAACTTTTTGAGGAAAATCAAGACACAGAGAAAGCATTCTCTGGATTTTAATGCTGCTCTTGAGCTTGCTCAGGGTCTGCAGGATCCGATAAAGGAGAAAGAAGGCTGCAAGGGCTTAGTTTGTTTTCTATAA

Coding sequence (CDS)

ATGGCGATGGCGACAGCGATGCCAATGCGTTGCTCTTGCTTTCTTTCCCGCCCGAAAAATTCTCCGCGATCTCCTCCCTCCGATCAGTTAACTAGGAAACTCCATTTTTCCGGGAAAATGCCTCATGGTTCAGTTAATGTGGGCAATTTTGTTACATTTTGTGGAGACAGCATCGTCACACCATCTGGGAGACAGAATTCGTTGCCGGTTCTAAAATGTCAGGGAAATAATGAGACAAAATTTCCAGTTATGGCGTTTCTGTTAGCTAATGTATTTACATTTTCCGTACCATTGAAAGTTTTGGCTGAAACATGCGAGGCTGAGAATTCTGCTTTCAACATGCCAATCCTTCTTTCTGTCTCCCTTATAGGGGCCACTGTTGGAGGATTGCTTGCTCGACAAAGAAAGGGAGAACTGAAACGGTTAAATGAACAACTTCGCCAGATTAATGCGGCATTAAGAAGGCAAGCAAAGATTGAGTCTTATGCTCCCACCTTAAGTTATGCTCCTGTTGGTGGAAGAACATCGAGAGTTGATGTAATTGTTGATCCAAGGAAGGAGGAGTTAATCTCTCGATTGAAGATCTGGGAAAGAAACTTTTTGAGGAAAATCAAGACACAGAGAAAGCATTCTCTGGATTTTAATGCTGCTCTTGAGCTTGCTCAGGGTCTGCAGGATCCGATAAAGGAGAAAGAAGGCTGCAAGGGCTTAGTTTGTTTTCTATAA

Protein sequence

MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVTPSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSVSLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDVIVDPRKEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGLVCFL

Homology

[Close]

BLAST of Carg27124 vs. NCBI nr
Match: XP_022955373.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 411.8 bits (1057), Expect = 1.6e-111
Identity = 216/237 (91.14%), Postives = 220/237 (92.83%), Query Frame = 0


Query: 1   MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVT 60
           MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVT
Sbjct: 1   MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVT 60

Query: 61  PSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSV 120
           PSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSV
Sbjct: 61  PSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSV 120

Query: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDV 180
           SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRT   DV
Sbjct: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTFESDV 180

Query: 181 IVDPRKEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           IVDPRKEELISRLK   +NFLR  +   K  LDF  ALELAQGLQDPIKEK+  +GL
Sbjct: 181 IVDPRKEELISRLKS-GKNFLRN-QDPEKAFLDFKTALELAQGLQDPIKEKKAARGL 235

[Close]

BLAST of Carg27124 vs. NCBI nr
Match: XP_022955374.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 411.8 bits (1057), Expect = 1.6e-111
Identity = 216/237 (91.14%), Postives = 220/237 (92.83%), Query Frame = 0


Query: 1   MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVT 60
           MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVT
Sbjct: 1   MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVT 60

Query: 61  PSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSV 120
           PSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSV
Sbjct: 61  PSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSV 120

Query: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDV 180
           SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRT   DV
Sbjct: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTFESDV 180

Query: 181 IVDPRKEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           IVDPRKEELISRLK   +NFLR  +   K  LDF  ALELAQGLQDPIKEK+  +GL
Sbjct: 181 IVDPRKEELISRLKS-GKNFLRN-QDPEKAFLDFKTALELAQGLQDPIKEKKAARGL 235

[Close]

BLAST of Carg27124 vs. NCBI nr
Match: XP_023527015.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 7.6e-109
Identity = 212/237 (89.45%), Postives = 217/237 (91.56%), Query Frame = 0


Query: 1   MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVT 60
           MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNV NFVTFCGDSIVT
Sbjct: 1   MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVSNFVTFCGDSIVT 60

Query: 61  PSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSV 120
           PSG QNS PVLKCQGNNETKFPVMAFLLANV+TFSVPLKVLAETCEAENSAFNMPILLSV
Sbjct: 61  PSGIQNSSPVLKCQGNNETKFPVMAFLLANVYTFSVPLKVLAETCEAENSAFNMPILLSV 120

Query: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDV 180
           SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRT   DV
Sbjct: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTFESDV 180

Query: 181 IVDPRKEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           IVDPRKEELISRLK   +NFLR  +   K  LDF  ALELAQGLQDPIKEK+  +GL
Sbjct: 181 IVDPRKEELISRLKS-GKNFLRN-QDPEKAFLDFKTALELAQGLQDPIKEKKAARGL 235

[Close]

BLAST of Carg27124 vs. NCBI nr
Match: XP_022980677.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 392.9 bits (1008), Expect = 7.9e-106
Identity = 208/237 (87.76%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVT 60
           MAMATAM MRCSCFLSRP NSPRS PS QL RKLHFSGKMPHGSVNVGNFVTFCGDSIVT
Sbjct: 1   MAMATAMAMRCSCFLSRPNNSPRSSPSGQLKRKLHFSGKMPHGSVNVGNFVTFCGDSIVT 60

Query: 61  PSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSV 120
           PSGRQNSLPVLKCQGNNET FPVMA LLANVFTFSVPLKVLAETCE ENSAFNMPILLSV
Sbjct: 61  PSGRQNSLPVLKCQGNNETNFPVMALLLANVFTFSVPLKVLAETCETENSAFNMPILLSV 120

Query: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDV 180
           SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRT   DV
Sbjct: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTFESDV 180

Query: 181 IVDPRKEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           IVDPRKEELISRLK   +NFLR  +   K  LDF  ALELAQGLQDPIKEK+  +GL
Sbjct: 181 IVDPRKEELISRLKS-GKNFLRN-QDPEKAFLDFKTALELAQGLQDPIKEKKAARGL 235

[Close]

BLAST of Carg27124 vs. NCBI nr
Match: XP_022980676.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 392.9 bits (1008), Expect = 7.9e-106
Identity = 208/237 (87.76%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MAMATAMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVT 60
           MAMATAM MRCSCFLSRP NSPRS PS QL RKLHFSGKMPHGSVNVGNFVTFCGDSIVT
Sbjct: 1   MAMATAMAMRCSCFLSRPNNSPRSSPSGQLKRKLHFSGKMPHGSVNVGNFVTFCGDSIVT 60

Query: 61  PSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSV 120
           PSGRQNSLPVLKCQGNNET FPVMA LLANVFTFSVPLKVLAETCE ENSAFNMPILLSV
Sbjct: 61  PSGRQNSLPVLKCQGNNETNFPVMALLLANVFTFSVPLKVLAETCETENSAFNMPILLSV 120

Query: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDV 180
           SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRT   DV
Sbjct: 121 SLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTFESDV 180

Query: 181 IVDPRKEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           IVDPRKEELISRLK   +NFLR  +   K  LDF  ALELAQGLQDPIKEK+  +GL
Sbjct: 181 IVDPRKEELISRLKS-GKNFLRN-QDPEKAFLDFKTALELAQGLQDPIKEKKAARGL 235

[Close]

BLAST of Carg27124 vs. TAIR10
Match: AT3G14110.3 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-46
Identity = 102/164 (62.20%), Postives = 126/164 (76.83%), Query Frame = 0


Query: 75  GNNETKFPVMAFLLANVFTFSVPLKVL-AETCEAENSAFNMPILLSVSLIGATVGGLLAR 134
           G    K PVMA LL N    + PL+ L AE CE E+S F+MPILL V+LIGATVGGLLAR
Sbjct: 89  GIGRLKLPVMAVLLTNSLQMATPLEALAAEICEPESSMFSMPILLLVALIGATVGGLLAR 148

Query: 135 QRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDVIVDPRKEELISRL 194
           QRKGEL+RLNEQLRQINAALRRQAKIESYAP+LSYAPVG R    ++IV+P+K+ELIS+L
Sbjct: 149 QRKGELQRLNEQLRQINAALRRQAKIESYAPSLSYAPVGARIPDSEIIVEPKKQELISKL 208

Query: 195 KIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           K   + FLR  + ++ ++ +F  ALELAQ L+DP +EK+  +GL
Sbjct: 209 KT-GKTFLRNQEPEKAYT-EFKIALELAQSLKDPTEEKKAARGL 250

[Close]

BLAST of Carg27124 vs. Swiss-Prot
Match: sp|Q940U6|FLU_ARATH (Protein FLUORESCENT IN BLUE LIGHT, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FLU PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-45
Identity = 102/165 (61.82%), Postives = 127/165 (76.97%), Query Frame = 0


Query: 74  QGNNETKFPVMAFLLANVFTFSVPLKVL-AETCEAENSAFNMPILLSVSLIGATVGGLLA 133
           +G    K PVMA LL N    + PL+ L AE CE E+S F+MPILL V+LIGATVGGLLA
Sbjct: 87  EGIGRLKLPVMAVLLTNSLQMATPLEALAAEICEPESSMFSMPILLLVALIGATVGGLLA 146

Query: 134 RQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDVIVDPRKEELISR 193
           RQRKGEL+RLNEQLRQINAALRRQAKIESYAP+LSYAPVG R    ++IV+P+K+ELIS+
Sbjct: 147 RQRKGELQRLNEQLRQINAALRRQAKIESYAPSLSYAPVGARIPDSEIIVEPKKQELISK 206

Query: 194 LKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           LK   + FLR  + ++ ++ +F  ALELAQ L+DP +EK+  +GL
Sbjct: 207 LKT-GKTFLRNQEPEKAYT-EFKIALELAQSLKDPTEEKKAARGL 249

[Close]

BLAST of Carg27124 vs. TrEMBL
Match: tr|A0A0A0L9E8|A0A0A0L9E8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645960 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.3e-85
Identity = 172/232 (74.14%), Postives = 196/232 (84.48%), Query Frame = 0


Query: 6   AMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVTPSGRQ 65
           AM MRCSCFLSR  NSP SP S  L+R LH SGK+PH ++NV NFV FCG+SI+ P   Q
Sbjct: 2   AMAMRCSCFLSR-LNSPPSPSSHHLSRSLHLSGKVPHVAINVDNFVKFCGESILRPLQIQ 61

Query: 66  NSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSVSLIGA 125
           N+LPV+KCQGN ET+FPVMAFLLANVFTFSVPLK +AETCEAE+SAFNMPILL+V+L+GA
Sbjct: 62  NALPVIKCQGNIETRFPVMAFLLANVFTFSVPLKAMAETCEAESSAFNMPILLAVALVGA 121

Query: 126 TVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDVIVDPR 185
           TVGGLLARQR+GELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGR    +VIVDPR
Sbjct: 122 TVGGLLARQRRGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRILENEVIVDPR 181

Query: 186 KEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           KE+LISRLK   +NFLR  +   K  ++F  ALELAQGLQDPI+EK+  +GL
Sbjct: 182 KEDLISRLKS-GKNFLRN-QDPEKAFVEFKTALELAQGLQDPIEEKKAARGL 230

[Close]

BLAST of Carg27124 vs. TrEMBL
Match: tr|A0A1S3CBS3|A0A1S3CBS3_CUCME (protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499181 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 4.8e-83
Identity = 170/232 (73.28%), Postives = 192/232 (82.76%), Query Frame = 0


Query: 6   AMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVTPSGRQ 65
           AM MRCSCF SR  NSPRSP S  L R LH SGK+PH ++NV NFV FCG+S+V P   Q
Sbjct: 2   AMAMRCSCFFSR-LNSPRSPSSHHLFRDLHVSGKIPHVALNVDNFVKFCGESVVRPLQIQ 61

Query: 66  NSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAFNMPILLSVSLIGA 125
           N+LPV K QGN ET+FPVMAFLLANVFTFSVPLK +AETCEAE+ AF+MPILL+V+L+GA
Sbjct: 62  NALPVTKSQGNIETRFPVMAFLLANVFTFSVPLKAMAETCEAESPAFDMPILLAVALVGA 121

Query: 126 TVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDVIVDPR 185
           TVGGLLARQR+GELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGR    +VIVDPR
Sbjct: 122 TVGGLLARQRRGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRILENEVIVDPR 181

Query: 186 KEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           KEELISRLK   +NFLR  +   K  ++F  ALELAQGLQDPI+EK+  +GL
Sbjct: 182 KEELISRLKS-GKNFLRN-QDPEKAFVEFKTALELAQGLQDPIEEKKAARGL 230

[Close]

BLAST of Carg27124 vs. TrEMBL
Match: tr|A0A1S3CCB5|A0A1S3CCB5_CUCME (protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499181 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.9e-72
Identity = 148/201 (73.63%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 37  SGKMPHGSVNVGNFVTFCGDSIVTPSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSV 96
           +GK+PH ++NV NFV FCG+S+V P   QN+LPV K QGN ET+FPVMAFLLANVFTFSV
Sbjct: 8   AGKIPHVALNVDNFVKFCGESVVRPLQIQNALPVTKSQGNIETRFPVMAFLLANVFTFSV 67

Query: 97  PLKVLAETCEAENSAFNMPILLSVSLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQ 156
           PLK +AETCEAE+ AF+MPILL+V+L+GATVGGLLARQR+GELKRLNEQLRQINAALRRQ
Sbjct: 68  PLKAMAETCEAESPAFDMPILLAVALVGATVGGLLARQRRGELKRLNEQLRQINAALRRQ 127

Query: 157 AKIESYAPTLSYAPVGGRTSRVDVIVDPRKEELISRLKIWERNFLRKIKTQRKHSLDFNA 216
           AKIESYAPTLSYAPVGGR    +VIVDPRKEELISRLK   +NFLR  +   K  ++F  
Sbjct: 128 AKIESYAPTLSYAPVGGRILENEVIVDPRKEELISRLKS-GKNFLRN-QDPEKAFVEFKT 187

Query: 217 ALELAQGLQDPIKEKEGCKGL 238
           ALELAQGLQDPI+EK+  +GL
Sbjct: 188 ALELAQGLQDPIEEKKAARGL 206

[Close]

BLAST of Carg27124 vs. TrEMBL
Match: tr|A0A2I4FTQ2|A0A2I4FTQ2_9ROSI (protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC109001961 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 139/234 (59.40%), Postives = 169/234 (72.22%), Query Frame = 0


Query: 6   AMPMRCSCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIVTPSGRQ 65
           A+ +RCSCF + P N  RSPP   L RK H +GKM   S   G FV   G++   PS   
Sbjct: 2   AVVLRCSCFFTSP-NPRRSPPPVPLVRKSHTTGKMDSLSFKGGRFVLSPGETFDVPSEIC 61

Query: 66  NSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAF--NMPILLSVSLI 125
           + LP L+CQGN + + P MAF+++N    + P K LAETCEAENS F  NMP+LL V+LI
Sbjct: 62  HILPNLQCQGNIQLRTPTMAFIVSNALMLTTPFKALAETCEAENSVFNMNMPLLLFVALI 121

Query: 126 GATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSRVDVIVD 185
           GATVGGLLARQR+GELKRLNEQLRQINAALRRQAKIESYAP+LSYAPVGGR    +VIVD
Sbjct: 122 GATVGGLLARQRRGELKRLNEQLRQINAALRRQAKIESYAPSLSYAPVGGRIMENEVIVD 181

Query: 186 PRKEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
           P+K+ELISRLK   +NFLR  + + K  ++F  ALELAQ + DP +EK+  +GL
Sbjct: 182 PKKQELISRLKT-GKNFLRNQELE-KAFMEFKTALELAQNIMDPTEEKKAARGL 232

[Close]

BLAST of Carg27124 vs. TrEMBL
Match: tr|A0A2P4KLQ6|A0A2P4KLQ6_QUESU (Protein fluorescent in blue light, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_27852 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 140/240 (58.33%), Postives = 169/240 (70.42%), Query Frame = 0


Query: 1   MAMATAMPMRC-SCFLSRPKNSPRSPPSDQLTRKLHFSGKMPHGSVNVGNFVTFCGDSIV 60
           ++ A A+ +RC SCF + P +  RSPPSD L RK H  GK+   S  V  FV+    +  
Sbjct: 90  LSEAMAVMLRCSSCFFTPPNSIARSPPSDPLRRKSHAPGKIATLSYKVERFVSSLRSTFN 149

Query: 61  TPSGRQNSLPVLKCQGNNETKFPVMAFLLANVFTFSVPLKVLAETCEAENSAF--NMPIL 120
             S     LP L CQ N     P MAFL++N    S PLK LAETCEA+NS F  NMP+L
Sbjct: 150 GSSEMCQMLPSLHCQENKRVGIPTMAFLVSNALMLSTPLKALAETCEADNSVFNMNMPLL 209

Query: 121 LSVSLIGATVGGLLARQRKGELKRLNEQLRQINAALRRQAKIESYAPTLSYAPVGGRTSR 180
           L+V+LIGATVGGLLARQR+GEL+R+NEQLRQIN ALRRQAKIESYAPTLSYAPVGGR   
Sbjct: 210 LAVALIGATVGGLLARQRRGELERMNEQLRQINTALRRQAKIESYAPTLSYAPVGGRIPE 269

Query: 181 VDVIVDPRKEELISRLKIWERNFLRKIKTQRKHSLDFNAALELAQGLQDPIKEKEGCKGL 238
            +VIVDP+K+ELISRLK   +NFLR  + + K  L+F  ALELAQ L+DPI+EK+  +GL
Sbjct: 270 TEVIVDPKKQELISRLKS-GKNFLRNQELE-KAFLEFKTALELAQNLKDPIEEKKAARGL 327

The following BLAST results are available for this feature:

BLAST of Carg27124 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955373.1	1.6e-111	91.14	protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [Cucurbita mosc...	[more]
XP_022955374.1	1.6e-111	91.14	protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X2 [Cucurbita mosc...	[more]
XP_023527015.1	7.6e-109	89.45	protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like [Cucurbita pepo subsp. pep...	[more]
XP_022980677.1	7.9e-106	87.76	protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X2 [Cucurbita maxi...	[more]
XP_022980676.1	7.9e-106	87.76	protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [Cucurbita maxi...	[more]

BLAST of Carg27124 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G14110.3	1.7e-46	62.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Carg27124 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q940U6\|FLU_ARATH	1.4e-45	61.82	Protein FLUORESCENT IN BLUE LIGHT, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Carg27124 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9E8\|A0A0A0L9E8_CUCSA	1.3e-85	74.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645960 PE=4 SV=1	[more]
tr\|A0A1S3CBS3\|A0A1S3CBS3_CUCME	4.8e-83	73.28	protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X1 OS=Cucumis melo OX=3...	[more]
tr\|A0A1S3CCB5\|A0A1S3CCB5_CUCME	2.9e-72	73.63	protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 OS=Cucumis melo OX=3...	[more]
tr\|A0A2I4FTQ2\|A0A2I4FTQ2_9ROSI	2.1e-62	59.40	protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X1 OS=Juglans regia OX=...	[more]
tr\|A0A2P4KLQ6\|A0A2P4KLQ6_QUESU	1.3e-61	58.33	Protein fluorescent in blue light, chloroplastic OS=Quercus suber OX=58331 GN=CF...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27124-RA	Carg27124-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..159
None	No IPR available	PANTHER	PTHR10098:SF117	SUBFAMILY NOT NAMED	coord: 85..238
None	No IPR available	PANTHER	PTHR10098	RAPSYN-RELATED	coord: 85..238

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27124	Cla012538	Watermelon (97103) v1	carwmB0462
Carg27124	Csa3G645960	Cucumber (Chinese Long) v2	carcuB0497
Carg27124	MELO3C022680	Melon (DHL92) v3.5.1	carmeB0470
Carg27124	ClCG07G014470	Watermelon (Charleston Gray)	carwcgB0452
Carg27124	CSPI03G28450	Wild cucumber (PI 183967)	carcpiB0503
Carg27124	Cucsa.149430	Cucumber (Gy14) v1	carcgyB0536
Carg27124	CmaCh01G000120	Cucurbita maxima (Rimu)	carcmaB0648
Carg27124	CmaCh14G012020	Cucurbita maxima (Rimu)	carcmaB0647
Carg27124	CmoCh01G000130	Cucurbita moschata (Rifu)	carcmoB0630
Carg27124	CmoCh14G012260	Cucurbita moschata (Rifu)	carcmoB0629
Carg27124	Lsi07G006590	Bottle gourd (USVL1VR-Ls)	carlsiB421
Carg27124	Cp4.1LG02g17470	Cucurbita pepo (Zucchini)	carcpeB0652
Carg27124	Cp4.1LG03g14870	Cucurbita pepo (Zucchini)	carcpeB0653
Carg27124	CsGy3G026430	Cucumber (Gy14) v2	carcgybB0474
Carg27124	MELO3C022680.2	Melon (DHL92) v3.6.1	carmedB0473
Carg27124	CsaV3_3G030850	Cucumber (Chinese Long) v3	carcucB0500
Carg27124	Cla97C07G141320	Watermelon (97103) v2	carwmbB0488

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None