Cucsa.139170 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCCATTCGCAACCACATTCCGGCCTTAGGCTTAACAAAATCAAAGAAAAaCACCTCTCTGTATCTCTCCCCCTCCGCCCTCCGCTTCCGTCGCGGCCGATGAGCTCCGGTAGGATGGAGAGCCTATGGCGAGCTGCAACCGGCCAAGATCCGAGTCCGGAGGATTACAAAGGCGTCGAATTCTGGACCAGCCCCGAGCGAGCCGGCTGGCTCAACAAGCAAGGCGAATACCTGAGAACCTGGCGTCGCCGTTGGTTCGTTCTCAAACGAGGTAAACTCTTCTGGTTTAAGGACTCTATTGTTACTCGCGCTTCAATTCCACGCGGTGTTATCCCTGTCAATACCTGCCTCACCGTCAAAGGAGCTGAGGATATCCTCCATAAGCCTTGCGCCTTCGAACTCTCTACCACCGGTCAAGACACTATGTACTTCATCGCTGAGTCGGAGCGTGAAAAGGAGGAGTGGATCAATTCGATTGGGCGCTCGATAGTTCAGAATTCGCGATCGGTTACCGAATCTGAAGTTGTTGATTACGATAACAGGCGATGATTCCGATGTTGAAGATCTTTTCTTCTTCCTCTTTTTTtACTTtCTCTATGTACAGAAATGAGGCGAGATTTAGTCTCGGATGGTTGCGAGATGGCTACGTTTCGTCGAATTGGTACTATCGATCTCTGCTTCTTCTTTCTTGTTGTTAAAATTATGGCAGTGATGTGAATCGAACTGAATCTCCTCTACTTCCTTTTCTCTTGCTTCTTCTATTCTTCTGTCACGCATATAAACATCTATCCTACCCGGTTTTTCTTCTGTATTTGATCTTCCATGTGGATTAGTAAATTTCGTGCTCTACCGTATTGATGAAACTCC ATCCCATTCGCAACCACATTCCGGCCTTAGGCTTAACAAAATCAAAGAAAAACACCTCTCTGTATCTCTCCCCCTCCGCCCTCCGCTTCCGTCGCGGCCGATGAGCTCCGGTAGGATGGAGAGCCTATGGCGAGCTGCAACCGGCCAAGATCCGAGTCCGGAGGATTACAAAGGCGTCGAATTCTGGACCAGCCCCGAGCGAGCCGGCTGGCTCAACAAGCAAGGCGAATACCTGAGAACCTGGCGTCGCCGTTGGTTCGTTCTCAAACGAGGTAAACTCTTCTGGTTTAAGGACTCTATTGTTACTCGCGCTTCAATTCCACGCGGTGTTATCCCTGTCAATACCTGCCTCACCGTCAAAGGAGCTGAGGATATCCTCCATAAGCCTTGCGCCTTCGAACTCTCTACCACCGGTCAAGACACTATGTACTTCATCGCTGAGTCGGAGCGTGAAAAGGAGGAGTGGATCAATTCGATTGGGCGCTCGATAGTTCAGAATTCGCGATCGGTTACCGAATCTGAAGTTGTTGATTACGATAACAGGCGATGATTCCGATGTTGAAGATCTTTTCTTCTTCCTCTTTTTTTACTTTCTCTATGTACAGAAATGAGGCGAGATTTAGTCTCGGATGGTTGCGAGATGGCTACGTTTCGTCGAATTGGTACTATCGATCTCTGCTTCTTCTTTCTTGTTGTTAAAATTATGGCAGTGATGTGAATCGAACTGAATCTCCTCTACTTCCTTTTCTCTTGCTTCTTCTATTCTTCTGTCACGCATATAAACATCTATCCTACCCGGTTTTTCTTCTGTATTTGATCTTCCATGTGGATTAGTAAATTTCGTGCTCTACCGTATTGATGAAACTCC ATGAGCTCCGGTAGGATGGAGAGCCTATGGCGAGCTGCAACCGGCCAAGATCCGAGTCCGGAGGATTACAAAGGCGTCGAATTCTGGACCAGCCCCGAGCGAGCCGGCTGGCTCAACAAGCAAGGCGAATACCTGAGAACCTGGCGTCGCCGTTGGTTCGTTCTCAAACGAGGTAAACTCTTCTGGTTTAAGGACTCTATTGTTACTCGCGCTTCAATTCCACGCGGTGTTATCCCTGTCAATACCTGCCTCACCGTCAAAGGAGCTGAGGATATCCTCCATAAGCCTTGCGCCTTCGAACTCTCTACCACCGGTCAAGACACTATGTACTTCATCGCTGAGTCGGAGCGTGAAAAGGAGGAGTGGATCAATTCGATTGGGCGCTCGATAGTTCAGAATTCGCGATCGGTTACCGAATCTGAAGTTGTTGATTACGATAACAGGCGATGA MSSGRMESLWRAATGQDPSPEDYKGVEFWTSPERAGWLNKQGEYLRTWRRRWFVLKRGKLFWFKDSIVTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWINSIGRSIVQNSRSVTESEVVDYDNRR*
BLAST of Cucsa.139170 vs. Swiss-Prot
Match: PH1_ARATH (Pleckstrin homology domain-containing protein 1 OS=Arabidopsis thaliana GN=PH1 PE=2 SV=2) HSP 1 Score: 227.3 bits (578), Expect = 1.1e-58 Identity = 106/146 (72.60%), Postives = 127/146 (86.99%), Query Frame = 1
BLAST of Cucsa.139170 vs. Swiss-Prot
Match: Y4775_DICDI (PH domain-containing protein DDB_G0274775 OS=Dictyostelium discoideum GN=DDB_G0274775 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.1e-11 Identity = 42/111 (37.84%), Postives = 57/111 (51.35%), Query Frame = 1
BLAST of Cucsa.139170 vs. Swiss-Prot
Match: CYH3_MOUSE (Cytohesin-3 OS=Mus musculus GN=Cyth3 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09 Identity = 44/121 (36.36%), Postives = 60/121 (49.59%), Query Frame = 1
BLAST of Cucsa.139170 vs. Swiss-Prot
Match: PKHA7_DANRE (Pleckstrin homology domain-containing family A member 7 OS=Danio rerio GN=plekha7 PE=2 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 3.8e-09 Identity = 35/108 (32.41%), Postives = 58/108 (53.70%), Query Frame = 1
BLAST of Cucsa.139170 vs. Swiss-Prot
Match: CYH2_CHLAE (Cytohesin-2 OS=Chlorocebus aethiops GN=CYTH2 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08 Identity = 40/121 (33.06%), Postives = 61/121 (50.41%), Query Frame = 1
BLAST of Cucsa.139170 vs. TrEMBL
Match: A0A0A0KBN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G186365 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 3.0e-82 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.139170 vs. TrEMBL
Match: M5W0P1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013003mg PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.0e-65 Identity = 116/144 (80.56%), Postives = 130/144 (90.28%), Query Frame = 1
BLAST of Cucsa.139170 vs. TrEMBL
Match: A5BV78_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06350 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 1.3e-61 Identity = 115/144 (79.86%), Postives = 129/144 (89.58%), Query Frame = 1
BLAST of Cucsa.139170 vs. TrEMBL
Match: A0A067LDM7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08484 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 3.3e-60 Identity = 111/144 (77.08%), Postives = 130/144 (90.28%), Query Frame = 1
BLAST of Cucsa.139170 vs. TrEMBL
Match: T2DN45_PHAVU (Pleckstrin homology domain-containing protein OS=Phaseolus vulgaris GN=PHAVU_006G132900g PE=2 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 7.3e-60 Identity = 111/142 (78.17%), Postives = 127/142 (89.44%), Query Frame = 1
BLAST of Cucsa.139170 vs. TAIR10
Match: AT2G29700.1 (AT2G29700.1 pleckstrin homologue 1) HSP 1 Score: 227.3 bits (578), Expect = 6.5e-60 Identity = 106/146 (72.60%), Postives = 127/146 (86.99%), Query Frame = 1
BLAST of Cucsa.139170 vs. TAIR10
Match: AT5G05710.1 (AT5G05710.1 Pleckstrin homology (PH) domain superfamily protein) HSP 1 Score: 225.7 bits (574), Expect = 1.9e-59 Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 1
BLAST of Cucsa.139170 vs. NCBI nr
Match: gi|449450806|ref|XP_004143153.1| (PREDICTED: pleckstrin homology domain-containing protein 1 [Cucumis sativus]) HSP 1 Score: 312.4 bits (799), Expect = 4.3e-82 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Cucsa.139170 vs. NCBI nr
Match: gi|1009114667|ref|XP_015873808.1| (PREDICTED: pleckstrin homology domain-containing protein 1 [Ziziphus jujuba]) HSP 1 Score: 265.4 bits (677), Expect = 6.1e-68 Identity = 119/143 (83.22%), Postives = 134/143 (93.71%), Query Frame = 1
BLAST of Cucsa.139170 vs. NCBI nr
Match: gi|657951962|ref|XP_008355229.1| (PREDICTED: pleckstrin homology domain-containing protein 1-like [Malus domestica]) HSP 1 Score: 260.8 bits (665), Expect = 1.5e-66 Identity = 118/144 (81.94%), Postives = 133/144 (92.36%), Query Frame = 1
BLAST of Cucsa.139170 vs. NCBI nr
Match: gi|657985450|ref|XP_008384824.1| (PREDICTED: pleckstrin homology domain-containing protein 1-like [Malus domestica]) HSP 1 Score: 260.4 bits (664), Expect = 2.0e-66 Identity = 117/144 (81.25%), Postives = 133/144 (92.36%), Query Frame = 1
BLAST of Cucsa.139170 vs. NCBI nr
Match: gi|694398123|ref|XP_009374254.1| (PREDICTED: pleckstrin homology domain-containing protein 1-like [Pyrus x bretschneideri]) HSP 1 Score: 259.6 bits (662), Expect = 3.3e-66 Identity = 117/144 (81.25%), Postives = 133/144 (92.36%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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