Carg23849 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23849
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	pleckstrin homology domain-containing protein 1
Location	Cucurbita_argyrosperma_scaffold_345 : 60678 .. 61112 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGCCTGTGGCGATCGGCAACCGGCCAAGATCCAAGTCCAGAGGATTACAAGGGCGTCGAATTCTGGAACAGTCCCGAACGCGCCGGCTGGCTCAACAAGCAGGGTGAATACTTCAAAACCTGGCGTCGCCGTTGGTTCGTTCTGAAACAAGGTAAACTCTTGTGGTTTAAGGACTCTGTTGTTACTCGCGCTTCCATTCCACGCGGTGTCATCCCTGTCAATACCTGCCTCACTGTCAAGGGCGCTGAGGATGTCCTCCATAAGCCTTGCGCCTTCGAGCTCTCTACCACTGGTCAAGACACCATGTATTTTATCGCCAAGTCGGAGCGCGAAAAGGAGGAGTGGATTAATTCGATCGGCCGCTCGATAGTTCAGAATTCGCGATCGGTTACCGAATCTGAAGTCGTTGATTACGATAACAGGCGATGA

mRNA sequence

ATGGAGAGCCTGTGGCGATCGGCAACCGGCCAAGATCCAAGTCCAGAGGATTACAAGGGCGTCGAATTCTGGAACAGTCCCGAACGCGCCGGCTGGCTCAACAAGCAGGGTGAATACTTCAAAACCTGGCGTCGCCGTTGGTTCGTTCTGAAACAAGGTAAACTCTTGTGGTTTAAGGACTCTGTTGTTACTCGCGCTTCCATTCCACGCGGTGTCATCCCTGTCAATACCTGCCTCACTGTCAAGGGCGCTGAGGATGTCCTCCATAAGCCTTGCGCCTTCGAGCTCTCTACCACTGGTCAAGACACCATGTATTTTATCGCCAAGTCGGAGCGCGAAAAGGAGGAGTGGATTAATTCGATCGGCCGCTCGATAGTTCAGAATTCGCGATCGGTTACCGAATCTGAAGTCGTTGATTACGATAACAGGCGATGA

Coding sequence (CDS)

ATGGAGAGCCTGTGGCGATCGGCAACCGGCCAAGATCCAAGTCCAGAGGATTACAAGGGCGTCGAATTCTGGAACAGTCCCGAACGCGCCGGCTGGCTCAACAAGCAGGGTGAATACTTCAAAACCTGGCGTCGCCGTTGGTTCGTTCTGAAACAAGGTAAACTCTTGTGGTTTAAGGACTCTGTTGTTACTCGCGCTTCCATTCCACGCGGTGTCATCCCTGTCAATACCTGCCTCACTGTCAAGGGCGCTGAGGATGTCCTCCATAAGCCTTGCGCCTTCGAGCTCTCTACCACTGGTCAAGACACCATGTATTTTATCGCCAAGTCGGAGCGCGAAAAGGAGGAGTGGATTAATTCGATCGGCCGCTCGATAGTTCAGAATTCGCGATCGGTTACCGAATCTGAAGTCGTTGATTACGATAACAGGCGATGA

Protein sequence

MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKDSVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINSIGRSIVQNSRSVTESEVVDYDNRR

Homology

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BLAST of Carg23849 vs. NCBI nr
Match: XP_022947886.1 (pleckstrin homology domain-containing protein 1-like [Cucurbita moschata] >XP_023532322.1 pleckstrin homology domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 8.4e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD
Sbjct: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS
Sbjct: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 121 IGRSIVQNSRSVTESEVVDYDNRR 144

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BLAST of Carg23849 vs. NCBI nr
Match: XP_023007310.1 (pleckstrin homology domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 301.2 bits (770), Expect = 1.9e-78
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD
Sbjct: 1   MESLWRAATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS
Sbjct: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 121 IGRSIVQNSRSVTESEVVDYDNRR 144

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BLAST of Carg23849 vs. NCBI nr
Match: XP_004143153.1 (PREDICTED: pleckstrin homology domain-containing protein 1 [Cucumis sativus] >XP_008464048.1 PREDICTED: pleckstrin homology domain-containing protein 1 [Cucumis melo] >KGN47090.1 hypothetical protein Csa_6G186365 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 4.3e-75
Identity = 135/144 (93.75%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSPEDYKGVEFW SPERAGWLNKQGEY +TWRRRWFVLK+GKL WFKD
Sbjct: 6   MESLWRAATGQDPSPEDYKGVEFWTSPERAGWLNKQGEYLRTWRRRWFVLKRGKLFWFKD 65

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S+VTRASIPRGVIPVNTCLTVKGAED+LHKPCAFELSTTGQDTMYFIA+SEREKEEWINS
Sbjct: 66  SIVTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWINS 125

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 126 IGRSIVQNSRSVTESEVVDYDNRR 149

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BLAST of Carg23849 vs. NCBI nr
Match: XP_022944633.1 (pleckstrin homology domain-containing protein 1-like [Cucurbita moschata] >XP_022986962.1 pleckstrin homology domain-containing protein 1-like [Cucurbita maxima] >XP_023512687.1 pleckstrin homology domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.7 bits (740), Expect = 5.6e-75
Identity = 135/144 (93.75%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSP+DYKGVEFW SPERAGWLNKQGEY KTWRRRWFVLKQGKL WFKD
Sbjct: 1   MESLWRAATGQDPSPDDYKGVEFWTSPERAGWLNKQGEYLKTWRRRWFVLKQGKLFWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S+VTRASIPRGVIPVNTCLTVKGAED+LHKPCAFELSTTG DTMYFIA+SEREKEEWINS
Sbjct: 61  SIVTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGHDTMYFIAESEREKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 121 IGRSIVQNSRSVTESEVVDYDNRR 144

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BLAST of Carg23849 vs. NCBI nr
Match: XP_022148366.1 (pleckstrin homology domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 283.5 bits (724), Expect = 4.0e-73
Identity = 131/144 (90.97%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSP+DYKG+EFW +PERAGWLNKQGEY K WRRRWFVLKQGKL WFKD
Sbjct: 1   MESLWRAATGQDPSPDDYKGIEFWTTPERAGWLNKQGEYLKNWRRRWFVLKQGKLFWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S V RAS+PRGVIPVNTCLTVKGAED+LHKPCAFELSTTGQDTMYFIA+SEREKEEWINS
Sbjct: 61  SDVNRASVPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 121 IGRSIVQNSRSVTESEVVDYDNRR 144

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BLAST of Carg23849 vs. TAIR10
Match: AT2G29700.1 (pleckstrin homologue 1)

HSP 1 Score: 225.7 bits (574), Expect = 1.8e-59
Identity = 108/146 (73.97%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MES+WR ATGQDPS EDY+G+EFW++PER+GWL KQG+Y KTWRRRWFVLK+GKLLWFKD
Sbjct: 1   MESIWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query: 61  SVVT--RASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWI 120
                 R S PRGVI V  CLTVKGAEDV++KP AFELS +G  TM+FIA +E+EKEEWI
Sbjct: 61  QAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELS-SGSYTMFFIADNEKEKEEWI 120

Query: 121 NSIGRSIVQNSRSVTESEVVDYDNRR 145
           NSIGRSIVQ+SRSVT+SEV+DYD+RR
Sbjct: 121 NSIGRSIVQHSRSVTDSEVLDYDHRR 145

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BLAST of Carg23849 vs. TAIR10
Match: AT5G05710.1 (Pleckstrin homology (PH) domain superfamily protein)

HSP 1 Score: 222.2 bits (565), Expect = 2.0e-58
Identity = 108/144 (75.00%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 1   MESLWRSAT-GQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFK 60
           M SLWR+   GQ+ + EDY GVEFW++PER GWL KQGEY KTWRRRWFVLKQGKL WFK
Sbjct: 1   MASLWRAVIGGQNNNSEDYGGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFK 60

Query: 61  DSVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWIN 120
           DS VTR S PRGV+PV +CLT KGAEDVL+K  AFELST   +TMYFIA SE+EKE+WIN
Sbjct: 61  DSDVTRVSRPRGVVPVESCLTAKGAEDVLNKQNAFELSTR-NETMYFIADSEKEKEDWIN 120

Query: 121 SIGRSIVQNSRSVTESEVVDYDNR 144
           SIGRSIVQNSRSVT+SE+VDYDN+
Sbjct: 121 SIGRSIVQNSRSVTDSEIVDYDNK 143

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BLAST of Carg23849 vs. Swiss-Prot
Match: sp|Q9ST43|PH1_ARATH (Pleckstrin homology domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PH1 PE=2 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 3.3e-58
Identity = 108/146 (73.97%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MES+WR ATGQDPS EDY+G+EFW++PER+GWL KQG+Y KTWRRRWFVLK+GKLLWFKD
Sbjct: 1   MESIWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query: 61  SVVT--RASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWI 120
                 R S PRGVI V  CLTVKGAEDV++KP AFELS +G  TM+FIA +E+EKEEWI
Sbjct: 61  QAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELS-SGSYTMFFIADNEKEKEEWI 120

Query: 121 NSIGRSIVQNSRSVTESEVVDYDNRR 145
           NSIGRSIVQ+SRSVT+SEV+DYD+RR
Sbjct: 121 NSIGRSIVQHSRSVTDSEVLDYDHRR 145

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BLAST of Carg23849 vs. Swiss-Prot
Match: sp|Q86IV4|Y4775_DICDI (PH domain-containing protein DDB_G0274775 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274775 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09
Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 28  ERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKDSVVTRASIPRGVIPVNTCLTVKGAEDV 87
           +R GWL KQG   +TWRRRWFVLK  KL +FK      A+   G+I +     VK  +D 
Sbjct: 17  DREGWLTKQGGSIRTWRRRWFVLKGKKLFYFKSKGDIEAT---GLIELEQNSFVKEEKDX 76

Query: 88  LHKPCAFELSTTGQDTMYFIAKSEREKEEWINSIGRSI 126
                      T +   Y  A++E + ++W+ SI R++
Sbjct: 77  XXXXXYMFTVGTSKRVFYIFAETETDMKQWMESIKRNL 111

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BLAST of Carg23849 vs. Swiss-Prot
Match: sp|O08967|CYH3_MOUSE (Cytohesin-3 OS=Mus musculus OX=10090 GN=Cyth3 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 45/121 (37.19%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 26  SPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKDSVVTRASIPRGVIPVNTCLTVKGAE 85
           +P+R GWL K G   KTW+RRWF+L    L +F+    T    PRG+IP+   L+++  E
Sbjct: 264 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFE---YTTDKEPRGIIPLEN-LSIREVE 323

Query: 86  DVLHKPCAFEL--------------------STTGQDTMYFI-AKSEREKEEWINSIGRS 126
           D   KP  FEL                       G   +Y I A S  EKEEW+ SI  S
Sbjct: 324 DP-RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKAS 379

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BLAST of Carg23849 vs. Swiss-Prot
Match: sp|Q76MY7|CYH2_CHLAE (Cytohesin-2 OS=Chlorocebus aethiops OX=9534 GN=CYTH2 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 41/121 (33.88%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 26  SPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKDSVVTRASIPRGVIPVNTCLTVKGAE 85
           +P+R GWL K G   KTW+RRWF+L    L +F+    T    PRG+IP+   L+++  +
Sbjct: 259 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFE---YTTDKEPRGIIPLEN-LSIREVD 318

Query: 86  DVLHKPCAFEL--------------------STTGQDTMYFI-AKSEREKEEWINSIGRS 126
           D   KP  FEL                       G   +Y I A ++ EK+EWI SI  +
Sbjct: 319 DP-RKPNCFELYIPNNKGQLIKACKTEADGRVVEGNHMVYRISAPTQEEKDEWIKSIQAA 374

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BLAST of Carg23849 vs. Swiss-Prot
Match: sp|Q80TI1|PKHH1_MOUSE (Pleckstrin homology domain-containing family H member 1 OS=Mus musculus OX=10090 GN=Plekhh1 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-08
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 28  ERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD-SVVTRASIPRGVIPVNTCLTVKGAED 87
           E++G+L K G   KTW+RRWFVL+QG++L++K  S V R   P+G + +N+   +   E+
Sbjct: 574 EKSGYLLKMGSRVKTWKRRWFVLRQGQILYYKSPSDVIRK--PQGQVDLNSHCQIVREEE 633

Query: 88  VLHKPCAFELSTTGQDTMYFIAKSEREKEEWI 119
                  F+L  +G  T Y  A+S    EEWI
Sbjct: 634 AQ----TFQL-ISGNKTYYLTAESPSLLEEWI 658

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BLAST of Carg23849 vs. TrEMBL
Match: tr|A0A1S3CL23|A0A1S3CL23_CUCME (pleckstrin homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103502029 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 135/144 (93.75%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSPEDYKGVEFW SPERAGWLNKQGEY +TWRRRWFVLK+GKL WFKD
Sbjct: 6   MESLWRAATGQDPSPEDYKGVEFWTSPERAGWLNKQGEYLRTWRRRWFVLKRGKLFWFKD 65

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S+VTRASIPRGVIPVNTCLTVKGAED+LHKPCAFELSTTGQDTMYFIA+SEREKEEWINS
Sbjct: 66  SIVTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWINS 125

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 126 IGRSIVQNSRSVTESEVVDYDNRR 149

[Close]

BLAST of Carg23849 vs. TrEMBL
Match: tr|A0A0A0KBN3|A0A0A0KBN3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G186365 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 135/144 (93.75%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSPEDYKGVEFW SPERAGWLNKQGEY +TWRRRWFVLK+GKL WFKD
Sbjct: 6   MESLWRAATGQDPSPEDYKGVEFWTSPERAGWLNKQGEYLRTWRRRWFVLKRGKLFWFKD 65

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S+VTRASIPRGVIPVNTCLTVKGAED+LHKPCAFELSTTGQDTMYFIA+SEREKEEWINS
Sbjct: 66  SIVTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWINS 125

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 126 IGRSIVQNSRSVTESEVVDYDNRR 149

[Close]

BLAST of Carg23849 vs. TrEMBL
Match: tr|A0A2P6QJS4|A0A2P6QJS4_ROSCH (Putative PH domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0069011 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65
Identity = 119/144 (82.64%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           ME LWR+ATGQDPSPEDY G+EFW++PERA WL KQGEY KTWRRRWFVLKQGKL WFKD
Sbjct: 1   MEGLWRAATGQDPSPEDYTGIEFWSNPERAAWLTKQGEYIKTWRRRWFVLKQGKLFWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S VT +S PRGVIPV TCLTVKGAEDVLHKPCAFELSTT  DTMYFIA +E+EKEEWINS
Sbjct: 61  SHVTPSSTPRGVIPVGTCLTVKGAEDVLHKPCAFELSTTTHDTMYFIADTEKEKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRS+VQ+SRS+ +SEVVDYDNRR
Sbjct: 121 IGRSLVQHSRSLADSEVVDYDNRR 144

[Close]

BLAST of Carg23849 vs. TrEMBL
Match: tr|A0A2I4GLV8|A0A2I4GLV8_9ROSI (pleckstrin homology domain-containing protein 1 OS=Juglans regia OX=51240 GN=LOC109009005 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65
Identity = 120/144 (83.33%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           ME+LWR+ATGQDPSPEDY GVEFW++PERAGWL KQGEY KTWRRRWFVLKQGKLLWFKD
Sbjct: 1   MENLWRAATGQDPSPEDYSGVEFWSNPERAGWLTKQGEYIKTWRRRWFVLKQGKLLWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S +TR S PRGV+PV TCLTVKGAEDVLHKPCAFELS + QDTMYF+A SE+EKEEWINS
Sbjct: 61  SHITRFSTPRGVVPVGTCLTVKGAEDVLHKPCAFELS-SNQDTMYFVADSEKEKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQ+SRSVT+SE+VDY +RR
Sbjct: 121 IGRSIVQHSRSVTDSEIVDYVSRR 143

[Close]

BLAST of Carg23849 vs. TrEMBL
Match: tr|A0A2P4HNG8|A0A2P4HNG8_QUESU (Pleckstrin likey domain-containing protein 1 OS=Quercus suber OX=58331 GN=CFP56_74077 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.7e-65
Identity = 121/144 (84.03%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           ME+LWR+ATGQDPSPEDY GVEFW++PER+GWL KQGEY KTWRRRWFVLKQGKLLWFKD
Sbjct: 1   MENLWRAATGQDPSPEDYSGVEFWSNPERSGWLTKQGEYIKTWRRRWFVLKQGKLLWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S VTR+S PRGV+PV TCLTVKGAEDVLHKPCAFELS + QDTMYFIA SE+EKEEWINS
Sbjct: 61  SHVTRSSSPRGVVPVGTCLTVKGAEDVLHKPCAFELS-SNQDTMYFIADSEKEKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQ+SRSVT+SEVVDY ++R
Sbjct: 121 IGRSIVQHSRSVTDSEVVDYVSKR 143

The following BLAST results are available for this feature:

BLAST of Carg23849 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947886.1	8.4e-79	100.00	pleckstrin homology domain-containing protein 1-like [Cucurbita moschata] >XP_02...	[more]
XP_023007310.1	1.9e-78	99.31	pleckstrin homology domain-containing protein 1-like [Cucurbita maxima]	[more]
XP_004143153.1	4.3e-75	93.75	PREDICTED: pleckstrin homology domain-containing protein 1 [Cucumis sativus] >XP...	[more]
XP_022944633.1	5.6e-75	93.75	pleckstrin homology domain-containing protein 1-like [Cucurbita moschata] >XP_02...	[more]
XP_022148366.1	4.0e-73	90.97	pleckstrin homology domain-containing protein 1-like [Momordica charantia]	[more]

BLAST of Carg23849 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G29700.1	1.8e-59	73.97	pleckstrin homologue 1	[more]
AT5G05710.1	2.0e-58	75.00	Pleckstrin homology (PH) domain superfamily protein	[more]

BLAST of Carg23849 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ST43\|PH1_ARATH	3.3e-58	73.97	Pleckstrin homology domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q86IV4\|Y4775_DICDI	1.3e-09	35.71	PH domain-containing protein DDB_G0274775 OS=Dictyostelium discoideum OX=44689 G...	[more]
sp\|O08967\|CYH3_MOUSE	1.6e-09	37.19	Cytohesin-3 OS=Mus musculus OX=10090 GN=Cyth3 PE=1 SV=1	[more]
sp\|Q76MY7\|CYH2_CHLAE	1.4e-08	33.88	Cytohesin-2 OS=Chlorocebus aethiops OX=9534 GN=CYTH2 PE=2 SV=1	[more]
sp\|Q80TI1\|PKHH1_MOUSE	3.1e-08	39.13	Pleckstrin homology domain-containing family H member 1 OS=Mus musculus OX=10090...	[more]

BLAST of Carg23849 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CL23\|A0A1S3CL23_CUCME	2.8e-75	93.75	pleckstrin homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KBN3\|A0A0A0KBN3_CUCSA	2.8e-75	93.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G186365 PE=4 SV=1	[more]
tr\|A0A2P6QJS4\|A0A2P6QJS4_ROSCH	1.2e-65	82.64	Putative PH domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr...	[more]
tr\|A0A2I4GLV8\|A0A2I4GLV8_9ROSI	2.0e-65	83.33	pleckstrin homology domain-containing protein 1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2P4HNG8\|A0A2P4HNG8_QUESU	2.7e-65	84.03	Pleckstrin likey domain-containing protein 1 OS=Quercus suber OX=58331 GN=CFP56_...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011993	PH-like_dom_sf
IPR001849	PH_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23849-RA	Carg23849-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 27..128 e-value: 1.7E-21 score: 87.4
IPR001849	Pleckstrin homology domain	PFAM	PF00169	PH	coord: 28..124 e-value: 6.3E-21 score: 74.8
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 26..126 score: 17.251
IPR011993	PH-like domain superfamily	GENE3D	G3DSA:2.30.29.30		coord: 24..137 e-value: 1.3E-27 score: 97.9
None	No IPR available	PANTHER	PTHR14336:SF3	SUBFAMILY NOT NAMED	coord: 30..136
None	No IPR available	PANTHER	PTHR14336	TANDEM PH DOMAIN CONTAINING PROTEIN	coord: 30..136
None	No IPR available	CDD	cd13276	PH_AtPH1	coord: 29..135 e-value: 1.63454E-55 score: 170.961
None	No IPR available	SUPERFAMILY	SSF50729	PH domain-like	coord: 24..126

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23849	Cla013354	Watermelon (97103) v1	carwmB0512
Carg23849	MELO3C025860	Melon (DHL92) v3.5.1	carmeB0520
Carg23849	ClCG02G019620	Watermelon (Charleston Gray)	carwcgB0501
Carg23849	CSPI06G13900	Wild cucumber (PI 183967)	carcpiB0551
Carg23849	Cucsa.139170	Cucumber (Gy14) v1	carcgyB0591
Carg23849	CmaCh02G007490	Cucurbita maxima (Rimu)	carcmaB0724
Carg23849	CmaCh20G003520	Cucurbita maxima (Rimu)	carcmaB0723
Carg23849	CmoCh02G007560	Cucurbita moschata (Rifu)	carcmoB0701
Carg23849	CmoCh20G003780	Cucurbita moschata (Rifu)	carcmoB0700
Carg23849	Lsi10G014260	Bottle gourd (USVL1VR-Ls)	carlsiB469
Carg23849	Cp4.1LG05g09540	Cucurbita pepo (Zucchini)	carcpeB0728
Carg23849	CsGy6G013810	Cucumber (Gy14) v2	carcgybB0520
Carg23849	MELO3C025860.2	Melon (DHL92) v3.6.1	carmedB0525
Carg23849	CsaV3_6G016290	Cucumber (Chinese Long) v3	carcucB0550
Carg23849	Cla97C02G045640	Watermelon (97103) v2	carwmbB0539
Carg23849	Bhi10G000626	Wax gourd	carwgoB0626

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23849	Carg03359	Silver-seed gourd	carcarB357

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23849	Cucurbita pepo (Zucchini)	carcpeB0727
Carg23849	Cucumber (Chinese Long) v2	carcuB0544
Carg23849	Watermelon (97103) v2	carwmbB0540
Carg23849	Wax gourd	carwgoB0627