Carg23849-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23849-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	pleckstrin homology domain-containing protein 1
Location	Cucurbita_argyrosperma_scaffold_345 : 60678 .. 61112 (+)
Sequence length	435

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGCCTGTGGCGATCGGCAACCGGCCAAGATCCAAGTCCAGAGGATTACAAGGGCGTCGAATTCTGGAACAGTCCCGAACGCGCCGGCTGGCTCAACAAGCAGGGTGAATACTTCAAAACCTGGCGTCGCCGTTGGTTCGTTCTGAAACAAGGTAAACTCTTGTGGTTTAAGGACTCTGTTGTTACTCGCGCTTCCATTCCACGCGGTGTCATCCCTGTCAATACCTGCCTCACTGTCAAGGGCGCTGAGGATGTCCTCCATAAGCCTTGCGCCTTCGAGCTCTCTACCACTGGTCAAGACACCATGTATTTTATCGCCAAGTCGGAGCGCGAAAAGGAGGAGTGGATTAATTCGATCGGCCGCTCGATAGTTCAGAATTCGCGATCGGTTACCGAATCTGAAGTCGTTGATTACGATAACAGGCGATGA

mRNA sequence

ATGGAGAGCCTGTGGCGATCGGCAACCGGCCAAGATCCAAGTCCAGAGGATTACAAGGGCGTCGAATTCTGGAACAGTCCCGAACGCGCCGGCTGGCTCAACAAGCAGGGTGAATACTTCAAAACCTGGCGTCGCCGTTGGTTCGTTCTGAAACAAGGTAAACTCTTGTGGTTTAAGGACTCTGTTGTTACTCGCGCTTCCATTCCACGCGGTGTCATCCCTGTCAATACCTGCCTCACTGTCAAGGGCGCTGAGGATGTCCTCCATAAGCCTTGCGCCTTCGAGCTCTCTACCACTGGTCAAGACACCATGTATTTTATCGCCAAGTCGGAGCGCGAAAAGGAGGAGTGGATTAATTCGATCGGCCGCTCGATAGTTCAGAATTCGCGATCGGTTACCGAATCTGAAGTCGTTGATTACGATAACAGGCGATGA

Coding sequence (CDS)

ATGGAGAGCCTGTGGCGATCGGCAACCGGCCAAGATCCAAGTCCAGAGGATTACAAGGGCGTCGAATTCTGGAACAGTCCCGAACGCGCCGGCTGGCTCAACAAGCAGGGTGAATACTTCAAAACCTGGCGTCGCCGTTGGTTCGTTCTGAAACAAGGTAAACTCTTGTGGTTTAAGGACTCTGTTGTTACTCGCGCTTCCATTCCACGCGGTGTCATCCCTGTCAATACCTGCCTCACTGTCAAGGGCGCTGAGGATGTCCTCCATAAGCCTTGCGCCTTCGAGCTCTCTACCACTGGTCAAGACACCATGTATTTTATCGCCAAGTCGGAGCGCGAAAAGGAGGAGTGGATTAATTCGATCGGCCGCTCGATAGTTCAGAATTCGCGATCGGTTACCGAATCTGAAGTCGTTGATTACGATAACAGGCGATGA

Protein sequence

MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKDSVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINSIGRSIVQNSRSVTESEVVDYDNRR

Homology

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BLAST of Carg23849-RA vs. NCBI nr
Match: XP_022947886.1 (pleckstrin homology domain-containing protein 1-like [Cucurbita moschata] >XP_023532322.1 pleckstrin homology domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 8.4e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD
Sbjct: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS
Sbjct: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 121 IGRSIVQNSRSVTESEVVDYDNRR 144

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BLAST of Carg23849-RA vs. NCBI nr
Match: XP_023007310.1 (pleckstrin homology domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 301.2 bits (770), Expect = 1.9e-78
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD
Sbjct: 1   MESLWRAATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS
Sbjct: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 121 IGRSIVQNSRSVTESEVVDYDNRR 144

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BLAST of Carg23849-RA vs. NCBI nr
Match: XP_004143153.1 (PREDICTED: pleckstrin homology domain-containing protein 1 [Cucumis sativus] >XP_008464048.1 PREDICTED: pleckstrin homology domain-containing protein 1 [Cucumis melo] >KGN47090.1 hypothetical protein Csa_6G186365 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 4.3e-75
Identity = 135/144 (93.75%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSPEDYKGVEFW SPERAGWLNKQGEY +TWRRRWFVLK+GKL WFKD
Sbjct: 6   MESLWRAATGQDPSPEDYKGVEFWTSPERAGWLNKQGEYLRTWRRRWFVLKRGKLFWFKD 65

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S+VTRASIPRGVIPVNTCLTVKGAED+LHKPCAFELSTTGQDTMYFIA+SEREKEEWINS
Sbjct: 66  SIVTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWINS 125

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 126 IGRSIVQNSRSVTESEVVDYDNRR 149

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BLAST of Carg23849-RA vs. NCBI nr
Match: XP_022944633.1 (pleckstrin homology domain-containing protein 1-like [Cucurbita moschata] >XP_022986962.1 pleckstrin homology domain-containing protein 1-like [Cucurbita maxima] >XP_023512687.1 pleckstrin homology domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.7 bits (740), Expect = 5.6e-75
Identity = 135/144 (93.75%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSP+DYKGVEFW SPERAGWLNKQGEY KTWRRRWFVLKQGKL WFKD
Sbjct: 1   MESLWRAATGQDPSPDDYKGVEFWTSPERAGWLNKQGEYLKTWRRRWFVLKQGKLFWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S+VTRASIPRGVIPVNTCLTVKGAED+LHKPCAFELSTTG DTMYFIA+SEREKEEWINS
Sbjct: 61  SIVTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGHDTMYFIAESEREKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 121 IGRSIVQNSRSVTESEVVDYDNRR 144

[Close]

BLAST of Carg23849-RA vs. NCBI nr
Match: XP_022148366.1 (pleckstrin homology domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 283.5 bits (724), Expect = 4.0e-73
Identity = 131/144 (90.97%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSP+DYKG+EFW +PERAGWLNKQGEY K WRRRWFVLKQGKL WFKD
Sbjct: 1   MESLWRAATGQDPSPDDYKGIEFWTTPERAGWLNKQGEYLKNWRRRWFVLKQGKLFWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S V RAS+PRGVIPVNTCLTVKGAED+LHKPCAFELSTTGQDTMYFIA+SEREKEEWINS
Sbjct: 61  SDVNRASVPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 121 IGRSIVQNSRSVTESEVVDYDNRR 144

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BLAST of Carg23849-RA vs. TAIR10
Match: AT2G29700.1 (pleckstrin homologue 1)

HSP 1 Score: 225.7 bits (574), Expect = 1.8e-59
Identity = 108/146 (73.97%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MES+WR ATGQDPS EDY+G+EFW++PER+GWL KQG+Y KTWRRRWFVLK+GKLLWFKD
Sbjct: 1   MESIWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query: 61  SVVT--RASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWI 120
                 R S PRGVI V  CLTVKGAEDV++KP AFELS +G  TM+FIA +E+EKEEWI
Sbjct: 61  QAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELS-SGSYTMFFIADNEKEKEEWI 120

Query: 121 NSIGRSIVQNSRSVTESEVVDYDNRR 145
           NSIGRSIVQ+SRSVT+SEV+DYD+RR
Sbjct: 121 NSIGRSIVQHSRSVTDSEVLDYDHRR 145

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BLAST of Carg23849-RA vs. TAIR10
Match: AT5G05710.1 (Pleckstrin homology (PH) domain superfamily protein)

HSP 1 Score: 222.2 bits (565), Expect = 2.0e-58
Identity = 108/144 (75.00%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 1   MESLWRSAT-GQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFK 60
           M SLWR+   GQ+ + EDY GVEFW++PER GWL KQGEY KTWRRRWFVLKQGKL WFK
Sbjct: 1   MASLWRAVIGGQNNNSEDYGGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFK 60

Query: 61  DSVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWIN 120
           DS VTR S PRGV+PV +CLT KGAEDVL+K  AFELST   +TMYFIA SE+EKE+WIN
Sbjct: 61  DSDVTRVSRPRGVVPVESCLTAKGAEDVLNKQNAFELSTR-NETMYFIADSEKEKEDWIN 120

Query: 121 SIGRSIVQNSRSVTESEVVDYDNR 144
           SIGRSIVQNSRSVT+SE+VDYDN+
Sbjct: 121 SIGRSIVQNSRSVTDSEIVDYDNK 143

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BLAST of Carg23849-RA vs. Swiss-Prot
Match: sp|Q9ST43|PH1_ARATH (Pleckstrin homology domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PH1 PE=2 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 3.3e-58
Identity = 108/146 (73.97%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MES+WR ATGQDPS EDY+G+EFW++PER+GWL KQG+Y KTWRRRWFVLK+GKLLWFKD
Sbjct: 1   MESIWRIATGQDPSREDYEGIEFWSNPERSGWLTKQGDYIKTWRRRWFVLKRGKLLWFKD 60

Query: 61  SVVT--RASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWI 120
                 R S PRGVI V  CLTVKGAEDV++KP AFELS +G  TM+FIA +E+EKEEWI
Sbjct: 61  QAAAGIRGSTPRGVISVGDCLTVKGAEDVVNKPFAFELS-SGSYTMFFIADNEKEKEEWI 120

Query: 121 NSIGRSIVQNSRSVTESEVVDYDNRR 145
           NSIGRSIVQ+SRSVT+SEV+DYD+RR
Sbjct: 121 NSIGRSIVQHSRSVTDSEVLDYDHRR 145

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BLAST of Carg23849-RA vs. Swiss-Prot
Match: sp|Q86IV4|Y4775_DICDI (PH domain-containing protein DDB_G0274775 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0274775 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09
Identity = 35/98 (35.71%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 28  ERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKDSVVTRASIPRGVIPVNTCLTVKGAEDV 87
           +R GWL KQG   +TWRRRWFVLK  KL +FK      A+   G+I +     VK  +D 
Sbjct: 17  DREGWLTKQGGSIRTWRRRWFVLKGKKLFYFKSKGDIEAT---GLIELEQNSFVKEEKDX 76

Query: 88  LHKPCAFELSTTGQDTMYFIAKSEREKEEWINSIGRSI 126
                      T +   Y  A++E + ++W+ SI R++
Sbjct: 77  XXXXXYMFTVGTSKRVFYIFAETETDMKQWMESIKRNL 111

[Close]

BLAST of Carg23849-RA vs. Swiss-Prot
Match: sp|O08967|CYH3_MOUSE (Cytohesin-3 OS=Mus musculus OX=10090 GN=Cyth3 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09
Identity = 45/121 (37.19%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 26  SPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKDSVVTRASIPRGVIPVNTCLTVKGAE 85
           +P+R GWL K G   KTW+RRWF+L    L +F+    T    PRG+IP+   L+++  E
Sbjct: 264 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFE---YTTDKEPRGIIPLEN-LSIREVE 323

Query: 86  DVLHKPCAFEL--------------------STTGQDTMYFI-AKSEREKEEWINSIGRS 126
           D   KP  FEL                       G   +Y I A S  EKEEW+ SI  S
Sbjct: 324 DP-RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKAS 379

[Close]

BLAST of Carg23849-RA vs. Swiss-Prot
Match: sp|Q76MY7|CYH2_CHLAE (Cytohesin-2 OS=Chlorocebus aethiops OX=9534 GN=CYTH2 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 41/121 (33.88%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 26  SPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKDSVVTRASIPRGVIPVNTCLTVKGAE 85
           +P+R GWL K G   KTW+RRWF+L    L +F+    T    PRG+IP+   L+++  +
Sbjct: 259 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFE---YTTDKEPRGIIPLEN-LSIREVD 318

Query: 86  DVLHKPCAFEL--------------------STTGQDTMYFI-AKSEREKEEWINSIGRS 126
           D   KP  FEL                       G   +Y I A ++ EK+EWI SI  +
Sbjct: 319 DP-RKPNCFELYIPNNKGQLIKACKTEADGRVVEGNHMVYRISAPTQEEKDEWIKSIQAA 374

[Close]

BLAST of Carg23849-RA vs. Swiss-Prot
Match: sp|Q80TI1|PKHH1_MOUSE (Pleckstrin homology domain-containing family H member 1 OS=Mus musculus OX=10090 GN=Plekhh1 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-08
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 28  ERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD-SVVTRASIPRGVIPVNTCLTVKGAED 87
           E++G+L K G   KTW+RRWFVL+QG++L++K  S V R   P+G + +N+   +   E+
Sbjct: 574 EKSGYLLKMGSRVKTWKRRWFVLRQGQILYYKSPSDVIRK--PQGQVDLNSHCQIVREEE 633

Query: 88  VLHKPCAFELSTTGQDTMYFIAKSEREKEEWI 119
                  F+L  +G  T Y  A+S    EEWI
Sbjct: 634 AQ----TFQL-ISGNKTYYLTAESPSLLEEWI 658

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BLAST of Carg23849-RA vs. TrEMBL
Match: tr|A0A1S3CL23|A0A1S3CL23_CUCME (pleckstrin homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103502029 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 135/144 (93.75%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSPEDYKGVEFW SPERAGWLNKQGEY +TWRRRWFVLK+GKL WFKD
Sbjct: 6   MESLWRAATGQDPSPEDYKGVEFWTSPERAGWLNKQGEYLRTWRRRWFVLKRGKLFWFKD 65

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S+VTRASIPRGVIPVNTCLTVKGAED+LHKPCAFELSTTGQDTMYFIA+SEREKEEWINS
Sbjct: 66  SIVTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWINS 125

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 126 IGRSIVQNSRSVTESEVVDYDNRR 149

[Close]

BLAST of Carg23849-RA vs. TrEMBL
Match: tr|A0A0A0KBN3|A0A0A0KBN3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G186365 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 135/144 (93.75%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           MESLWR+ATGQDPSPEDYKGVEFW SPERAGWLNKQGEY +TWRRRWFVLK+GKL WFKD
Sbjct: 6   MESLWRAATGQDPSPEDYKGVEFWTSPERAGWLNKQGEYLRTWRRRWFVLKRGKLFWFKD 65

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S+VTRASIPRGVIPVNTCLTVKGAED+LHKPCAFELSTTGQDTMYFIA+SEREKEEWINS
Sbjct: 66  SIVTRASIPRGVIPVNTCLTVKGAEDILHKPCAFELSTTGQDTMYFIAESEREKEEWINS 125

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQNSRSVTESEVVDYDNRR
Sbjct: 126 IGRSIVQNSRSVTESEVVDYDNRR 149

[Close]

BLAST of Carg23849-RA vs. TrEMBL
Match: tr|A0A2P6QJS4|A0A2P6QJS4_ROSCH (Putative PH domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0069011 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65
Identity = 119/144 (82.64%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           ME LWR+ATGQDPSPEDY G+EFW++PERA WL KQGEY KTWRRRWFVLKQGKL WFKD
Sbjct: 1   MEGLWRAATGQDPSPEDYTGIEFWSNPERAAWLTKQGEYIKTWRRRWFVLKQGKLFWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S VT +S PRGVIPV TCLTVKGAEDVLHKPCAFELSTT  DTMYFIA +E+EKEEWINS
Sbjct: 61  SHVTPSSTPRGVIPVGTCLTVKGAEDVLHKPCAFELSTTTHDTMYFIADTEKEKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRS+VQ+SRS+ +SEVVDYDNRR
Sbjct: 121 IGRSLVQHSRSLADSEVVDYDNRR 144

[Close]

BLAST of Carg23849-RA vs. TrEMBL
Match: tr|A0A2I4GLV8|A0A2I4GLV8_9ROSI (pleckstrin homology domain-containing protein 1 OS=Juglans regia OX=51240 GN=LOC109009005 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65
Identity = 120/144 (83.33%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           ME+LWR+ATGQDPSPEDY GVEFW++PERAGWL KQGEY KTWRRRWFVLKQGKLLWFKD
Sbjct: 1   MENLWRAATGQDPSPEDYSGVEFWSNPERAGWLTKQGEYIKTWRRRWFVLKQGKLLWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S +TR S PRGV+PV TCLTVKGAEDVLHKPCAFELS + QDTMYF+A SE+EKEEWINS
Sbjct: 61  SHITRFSTPRGVVPVGTCLTVKGAEDVLHKPCAFELS-SNQDTMYFVADSEKEKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQ+SRSVT+SE+VDY +RR
Sbjct: 121 IGRSIVQHSRSVTDSEIVDYVSRR 143

[Close]

BLAST of Carg23849-RA vs. TrEMBL
Match: tr|A0A2P4HNG8|A0A2P4HNG8_QUESU (Pleckstrin likey domain-containing protein 1 OS=Quercus suber OX=58331 GN=CFP56_74077 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.7e-65
Identity = 121/144 (84.03%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MESLWRSATGQDPSPEDYKGVEFWNSPERAGWLNKQGEYFKTWRRRWFVLKQGKLLWFKD 60
           ME+LWR+ATGQDPSPEDY GVEFW++PER+GWL KQGEY KTWRRRWFVLKQGKLLWFKD
Sbjct: 1   MENLWRAATGQDPSPEDYSGVEFWSNPERSGWLTKQGEYIKTWRRRWFVLKQGKLLWFKD 60

Query: 61  SVVTRASIPRGVIPVNTCLTVKGAEDVLHKPCAFELSTTGQDTMYFIAKSEREKEEWINS 120
           S VTR+S PRGV+PV TCLTVKGAEDVLHKPCAFELS + QDTMYFIA SE+EKEEWINS
Sbjct: 61  SHVTRSSSPRGVVPVGTCLTVKGAEDVLHKPCAFELS-SNQDTMYFIADSEKEKEEWINS 120

Query: 121 IGRSIVQNSRSVTESEVVDYDNRR 145
           IGRSIVQ+SRSVT+SEVVDY ++R
Sbjct: 121 IGRSIVQHSRSVTDSEVVDYVSKR 143

The following BLAST results are available for this feature:

BLAST of Carg23849-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947886.1	8.4e-79	100.00	pleckstrin homology domain-containing protein 1-like [Cucurbita moschata] >XP_02...	[more]
XP_023007310.1	1.9e-78	99.31	pleckstrin homology domain-containing protein 1-like [Cucurbita maxima]	[more]
XP_004143153.1	4.3e-75	93.75	PREDICTED: pleckstrin homology domain-containing protein 1 [Cucumis sativus] >XP...	[more]
XP_022944633.1	5.6e-75	93.75	pleckstrin homology domain-containing protein 1-like [Cucurbita moschata] >XP_02...	[more]
XP_022148366.1	4.0e-73	90.97	pleckstrin homology domain-containing protein 1-like [Momordica charantia]	[more]

BLAST of Carg23849-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G29700.1	1.8e-59	73.97	pleckstrin homologue 1	[more]
AT5G05710.1	2.0e-58	75.00	Pleckstrin homology (PH) domain superfamily protein	[more]

BLAST of Carg23849-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ST43\|PH1_ARATH	3.3e-58	73.97	Pleckstrin homology domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q86IV4\|Y4775_DICDI	1.3e-09	35.71	PH domain-containing protein DDB_G0274775 OS=Dictyostelium discoideum OX=44689 G...	[more]
sp\|O08967\|CYH3_MOUSE	1.6e-09	37.19	Cytohesin-3 OS=Mus musculus OX=10090 GN=Cyth3 PE=1 SV=1	[more]
sp\|Q76MY7\|CYH2_CHLAE	1.4e-08	33.88	Cytohesin-2 OS=Chlorocebus aethiops OX=9534 GN=CYTH2 PE=2 SV=1	[more]
sp\|Q80TI1\|PKHH1_MOUSE	3.1e-08	39.13	Pleckstrin homology domain-containing family H member 1 OS=Mus musculus OX=10090...	[more]

BLAST of Carg23849-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CL23\|A0A1S3CL23_CUCME	2.8e-75	93.75	pleckstrin homology domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KBN3\|A0A0A0KBN3_CUCSA	2.8e-75	93.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G186365 PE=4 SV=1	[more]
tr\|A0A2P6QJS4\|A0A2P6QJS4_ROSCH	1.2e-65	82.64	Putative PH domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr...	[more]
tr\|A0A2I4GLV8\|A0A2I4GLV8_9ROSI	2.0e-65	83.33	pleckstrin homology domain-containing protein 1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2P4HNG8\|A0A2P4HNG8_QUESU	2.7e-65	84.03	Pleckstrin likey domain-containing protein 1 OS=Quercus suber OX=58331 GN=CFP56_...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011993	PH-like_dom_sf
IPR001849	PH_domain

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg23849	Carg23849	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23849-RA.exon.1	Carg23849-RA.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23849-RA.CDS.1	Carg23849-RA.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg23849-RA	Carg23849-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 27..128 e-value: 1.7E-21 score: 87.4
IPR001849	Pleckstrin homology domain	PFAM	PF00169	PH	coord: 28..124 e-value: 6.3E-21 score: 74.8
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 26..126 score: 17.251
IPR011993	PH-like domain superfamily	GENE3D	G3DSA:2.30.29.30		coord: 24..137 e-value: 1.3E-27 score: 97.9
None	No IPR available	PANTHER	PTHR14336:SF3	SUBFAMILY NOT NAMED	coord: 30..136
None	No IPR available	PANTHER	PTHR14336	TANDEM PH DOMAIN CONTAINING PROTEIN	coord: 30..136
None	No IPR available	CDD	cd13276	PH_AtPH1	coord: 29..135 e-value: 1.63454E-55 score: 170.961
None	No IPR available	SUPERFAMILY	SSF50729	PH domain-like	coord: 24..126